RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ACYP2P14621 99 aa3.28□□□□□ -1.88
CLCN3-201ENST00000347613 SPINK1P00995 79 aa3.27□□□□□ -1.89
CLCN3-201ENST00000347613 LINC00304Q8N9R0 145 aa3.27□□□□□ -1.89
CLCN3-201ENST00000347613 CDC42SE1Q9NRR8 79 aa3.27□□□□□ -1.89
CLCN3-201ENST00000347613 A0A1B0GU69 56 aa3.21□□□□□ -1.9
CLCN3-201ENST00000347613 A8MUU9 505 aa3.21□□□□□ -1.9
CLCN3-201ENST00000347613 DMBT1Q9UGM3 2413 aaPredicted RBP3.2□□□□□ -1.9
CLCN3-201ENST00000347613 C20orf166-AS1Q96NR2 134 aa3.2□□□□□ -1.9
CLCN3-201ENST00000347613 ROMO1P60602 79 aa3.2□□□□□ -1.9
CLCN3-201ENST00000347613 KRTAP10-8P60410 259 aa3.18□□□□□ -1.9
CLCN3-201ENST00000347613 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
CLCN3-201ENST00000347613 SPATA8Q6RVD6 105 aa3.18□□□□□ -1.9
CLCN3-201ENST00000347613 MUC2Q02817 5179 aa3.17□□□□□ -1.9
CLCN3-201ENST00000347613 H0YAA0 97 aa3.16□□□□□ -1.9
CLCN3-201ENST00000347613 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
CLCN3-201ENST00000347613 LCE2CQ5TA81 110 aa3.15□□□□□ -1.91
CLCN3-201ENST00000347613 HERC2O95714 4834 aa3.15□□□□□ -1.91
CLCN3-201ENST00000347613 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
CLCN3-201ENST00000347613 Q5VSD8 79 aa3.12□□□□□ -1.91
CLCN3-201ENST00000347613 UQCR11O14957 56 aa3.12□□□□□ -1.91
CLCN3-201ENST00000347613 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
CLCN3-201ENST00000347613 KRTAP4-5Q9BYR2 181 aa3.12□□□□□ -1.91
CLCN3-201ENST00000347613 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
CLCN3-201ENST00000347613 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
CLCN3-201ENST00000347613 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
CLCN3-201ENST00000347613 XP32Q5T750 250 aa3.1□□□□□ -1.91
CLCN3-201ENST00000347613 KRTAP10-6P60371 365 aaPredicted RBP3.08□□□□□ -1.92
CLCN3-201ENST00000347613 COX6B2Q6YFQ2 88 aa3.08□□□□□ -1.92
CLCN3-201ENST00000347613 CSAG1Q6PB30 78 aa3.07□□□□□ -1.92
CLCN3-201ENST00000347613 H1FX-AS1Q4G0G2 97 aa3.06□□□□□ -1.92
CLCN3-201ENST00000347613 A0A1B0GU33 70 aa3.05□□□□□ -1.92
CLCN3-201ENST00000347613 RPL37P61927 97 aaKnown RBP3.05□□□□□ -1.92
CLCN3-201ENST00000347613 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
CLCN3-201ENST00000347613 CRIPTQ9P021 101 aa3.05□□□□□ -1.92
CLCN3-201ENST00000347613 HERC1Q15751 4861 aa3.04□□□□□ -1.92
CLCN3-201ENST00000347613 LCE2AQ5TA79 106 aaPredicted RBP3.04□□□□□ -1.92
CLCN3-201ENST00000347613 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
CLCN3-201ENST00000347613 A0A0D9SG42 100 aa2.99□□□□□ -1.93
CLCN3-201ENST00000347613 KRTAP4-1Q9BYQ7 146 aa2.98□□□□□ -1.93
CLCN3-201ENST00000347613 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
CLCN3-201ENST00000347613 KRTAP15-1Q3LI76 137 aa2.97□□□□□ -1.93
CLCN3-201ENST00000347613 S4R3F8 94 aa2.97□□□□□ -1.93
CLCN3-201ENST00000347613 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
CLCN3-201ENST00000347613 FLGP20930 4061 aaPredicted RBP2.95□□□□□ -1.94
CLCN3-201ENST00000347613 KRTAP23-1A1A580 65 aa2.94□□□□□ -1.94
CLCN3-201ENST00000347613 LORP23490 312 aaPredicted RBP2.94□□□□□ -1.94
CLCN3-201ENST00000347613 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
CLCN3-201ENST00000347613 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
CLCN3-201ENST00000347613 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
CLCN3-201ENST00000347613 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
CLCN3-201ENST00000347613 TPRXLQ17RH7 258 aa2.92□□□□□ -1.94
CLCN3-201ENST00000347613 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
CLCN3-201ENST00000347613 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
CLCN3-201ENST00000347613 UBR4Q5T4S7 5183 aa2.87□□□□□ -1.95
CLCN3-201ENST00000347613 K7ERS5 55 aa2.86□□□□□ -1.95
CLCN3-201ENST00000347613 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
CLCN3-201ENST00000347613 M0QZ58 72 aa2.79□□□□□ -1.96
CLCN3-201ENST00000347613 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
CLCN3-201ENST00000347613 R4GN34 69 aa2.74□□□□□ -1.97
CLCN3-201ENST00000347613 LOC100996750A0A140TA64 210 aa2.74□□□□□ -1.97
CLCN3-201ENST00000347613 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
CLCN3-201ENST00000347613 USH2AO75445 5202 aa2.63□□□□□ -1.99
CLCN3-201ENST00000347613 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
CLCN3-201ENST00000347613 KRTAP19-1Q8IUB9 90 aa2.62□□□□□ -1.99
CLCN3-201ENST00000347613 MT1HP80294 61 aa2.6□□□□□ -1.99
CLCN3-201ENST00000347613 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
CLCN3-201ENST00000347613 MT1FP04733 61 aa2.59□□□□□ -2
CLCN3-201ENST00000347613 KMT2DO14686 5537 aa2.57□□□□□ -2
CLCN3-201ENST00000347613 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
CLCN3-201ENST00000347613 KRTAP9-2Q9BYQ4 174 aa2.56□□□□□ -2
CLCN3-201ENST00000347613 MT2AP02795 61 aa2.55□□□□□ -2
CLCN3-201ENST00000347613 KRTAP9-6A0A140TA67 174 aa2.55□□□□□ -2
CLCN3-201ENST00000347613 PLAC4Q8WY50 150 aa2.55□□□□□ -2
CLCN3-201ENST00000347613 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
CLCN3-201ENST00000347613 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
CLCN3-201ENST00000347613 M0R2T5 61 aa2.51□□□□□ -2.01
CLCN3-201ENST00000347613 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
CLCN3-201ENST00000347613 MT1BP07438 61 aa2.48□□□□□ -2.01
CLCN3-201ENST00000347613 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
CLCN3-201ENST00000347613 KRTAP10-5P60370 271 aa2.47□□□□□ -2.01
CLCN3-201ENST00000347613 TNP1P09430 55 aa2.46□□□□□ -2.02
CLCN3-201ENST00000347613 MT1XP80297 61 aa2.46□□□□□ -2.02
CLCN3-201ENST00000347613 KRTAP9-3Q9BYQ3 159 aa2.44□□□□□ -2.02
CLCN3-201ENST00000347613 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
CLCN3-201ENST00000347613 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
CLCN3-201ENST00000347613 LCE3BQ5TA77 95 aa2.43□□□□□ -2.02
CLCN3-201ENST00000347613 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
CLCN3-201ENST00000347613 KRTAP9-4Q9BYQ2 154 aa2.43□□□□□ -2.02
CLCN3-201ENST00000347613 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
CLCN3-201ENST00000347613 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
CLCN3-201ENST00000347613 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
CLCN3-201ENST00000347613 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
CLCN3-201ENST00000347613 LCE4AQ5TA78 99 aa2.4□□□□□ -2.03
CLCN3-201ENST00000347613 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
CLCN3-201ENST00000347613 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
CLCN3-201ENST00000347613 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
CLCN3-201ENST00000347613 INE1O15225 51 aa2.32□□□□□ -2.04
CLCN3-201ENST00000347613 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
CLCN3-201ENST00000347613 KRTAP10-12P60413 245 aa2.31□□□□□ -2.04
CLCN3-201ENST00000347613 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms