RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 Q5VV11 94 aa7.65□□□□□ -1.19
CTTN-202ENST00000346329 HMCN2Q8NDA2 5059 aa7.64□□□□□ -1.19
CTTN-202ENST00000346329 A0A1B0GU69 56 aa7.63□□□□□ -1.19
CTTN-202ENST00000346329 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
CTTN-202ENST00000346329 LCA10Q71F78 164 aa7.6□□□□□ -1.19
CTTN-202ENST00000346329 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
CTTN-202ENST00000346329 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
CTTN-202ENST00000346329 A0A0D9SG42 100 aa7.55□□□□□ -1.2
CTTN-202ENST00000346329 Q1T7F1 81 aa7.55□□□□□ -1.2
CTTN-202ENST00000346329 S4R3F8 94 aa7.49□□□□□ -1.21
CTTN-202ENST00000346329 LINC01554Q52M75 96 aa7.49□□□□□ -1.21
CTTN-202ENST00000346329 SEC61GP60059 68 aa7.47□□□□□ -1.21
CTTN-202ENST00000346329 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
CTTN-202ENST00000346329 LINC01558Q9Y6Z2 57 aa7.46□□□□□ -1.22
CTTN-202ENST00000346329 SEC61BP60468 96 aaKnown RBP7.45□□□□□ -1.22
CTTN-202ENST00000346329 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
CTTN-202ENST00000346329 P0C880 135 aa7.42□□□□□ -1.22
CTTN-202ENST00000346329 V9GYY9 64 aa7.42□□□□□ -1.22
CTTN-202ENST00000346329 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
CTTN-202ENST00000346329 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
CTTN-202ENST00000346329 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
CTTN-202ENST00000346329 M0R2T5 61 aa7.34□□□□□ -1.23
CTTN-202ENST00000346329 PMAIP1Q13794 54 aa7.34□□□□□ -1.23
CTTN-202ENST00000346329 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
CTTN-202ENST00000346329 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
CTTN-202ENST00000346329 A0A1B0GU33 70 aa7.31□□□□□ -1.24
CTTN-202ENST00000346329 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
CTTN-202ENST00000346329 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
CTTN-202ENST00000346329 UQCR11O14957 56 aa7.28□□□□□ -1.24
CTTN-202ENST00000346329 KRTAP13-4Q3LI77 160 aa7.27□□□□□ -1.25
CTTN-202ENST00000346329 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
CTTN-202ENST00000346329 H0YAA0 97 aa7.25□□□□□ -1.25
CTTN-202ENST00000346329 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
CTTN-202ENST00000346329 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
CTTN-202ENST00000346329 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
CTTN-202ENST00000346329 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
CTTN-202ENST00000346329 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
CTTN-202ENST00000346329 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
CTTN-202ENST00000346329 M0QZ58 72 aa7.14□□□□□ -1.27
CTTN-202ENST00000346329 USH2AO75445 5202 aa7.11□□□□□ -1.27
CTTN-202ENST00000346329 R4GN34 69 aa7.08□□□□□ -1.28
CTTN-202ENST00000346329 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
CTTN-202ENST00000346329 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
CTTN-202ENST00000346329 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
CTTN-202ENST00000346329 LCE2CQ5TA81 110 aa6.95□□□□□ -1.3
CTTN-202ENST00000346329 A6NN06 94 aa6.92□□□□□ -1.3
CTTN-202ENST00000346329 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
CTTN-202ENST00000346329 MT1HP80294 61 aa6.88□□□□□ -1.31
CTTN-202ENST00000346329 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
CTTN-202ENST00000346329 K7ERS5 55 aa6.86□□□□□ -1.31
CTTN-202ENST00000346329 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
CTTN-202ENST00000346329 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
CTTN-202ENST00000346329 KTN1-AS1Q86SY8 53 aa6.75□□□□□ -1.33
CTTN-202ENST00000346329 MT1FP04733 61 aa6.73□□□□□ -1.33
CTTN-202ENST00000346329 KMT2DO14686 5537 aa6.68□□□□□ -1.34
CTTN-202ENST00000346329 MT2AP02795 61 aa6.67□□□□□ -1.34
CTTN-202ENST00000346329 ROMO1P60602 79 aa6.59□□□□□ -1.35
CTTN-202ENST00000346329 KRTAP9-8Q9BYQ0 159 aa6.58□□□□□ -1.36
CTTN-202ENST00000346329 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.36
CTTN-202ENST00000346329 H3BS24 57 aa6.5□□□□□ -1.37
CTTN-202ENST00000346329 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
CTTN-202ENST00000346329 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
CTTN-202ENST00000346329 LCE2BO14633 110 aa6.31□□□□□ -1.4
CTTN-202ENST00000346329 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
CTTN-202ENST00000346329 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
CTTN-202ENST00000346329 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
CTTN-202ENST00000346329 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
CTTN-202ENST00000346329 MT1BP07438 61 aa6.25□□□□□ -1.41
CTTN-202ENST00000346329 TNP1P09430 55 aa6.16□□□□□ -1.42
CTTN-202ENST00000346329 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
CTTN-202ENST00000346329 MT1XP80297 61 aa6.1□□□□□ -1.43
CTTN-202ENST00000346329 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
CTTN-202ENST00000346329 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
CTTN-202ENST00000346329 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
CTTN-202ENST00000346329 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
CTTN-202ENST00000346329 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
CTTN-202ENST00000346329 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
CTTN-202ENST00000346329 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
CTTN-202ENST00000346329 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
CTTN-202ENST00000346329 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
CTTN-202ENST00000346329 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
CTTN-202ENST00000346329 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
CTTN-202ENST00000346329 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
CTTN-202ENST00000346329 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
CTTN-202ENST00000346329 NDUFAF8A1L188 74 aa5.77□□□□□ -1.49
CTTN-202ENST00000346329 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
CTTN-202ENST00000346329 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
CTTN-202ENST00000346329 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
CTTN-202ENST00000346329 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
CTTN-202ENST00000346329 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
CTTN-202ENST00000346329 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
CTTN-202ENST00000346329 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
CTTN-202ENST00000346329 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
CTTN-202ENST00000346329 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
CTTN-202ENST00000346329 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
CTTN-202ENST00000346329 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
CTTN-202ENST00000346329 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
CTTN-202ENST00000346329 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
CTTN-202ENST00000346329 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
CTTN-202ENST00000346329 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms