RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
CSNK1G3-201ENST00000345990 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
CSNK1G3-201ENST00000345990 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
CSNK1G3-201ENST00000345990 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
CSNK1G3-201ENST00000345990 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
CSNK1G3-201ENST00000345990 P0C880 135 aa6.63□□□□□ -1.35
CSNK1G3-201ENST00000345990 A6NN06 94 aa6.62□□□□□ -1.35
CSNK1G3-201ENST00000345990 TNP1P09430 55 aa6.58□□□□□ -1.36
CSNK1G3-201ENST00000345990 DNAH8Q96JB1 4490 aa6.57□□□□□ -1.36
CSNK1G3-201ENST00000345990 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
CSNK1G3-201ENST00000345990 RYR2Q92736 4967 aa6.52□□□□□ -1.37
CSNK1G3-201ENST00000345990 KMT2AQ03164 3969 aa6.51□□□□□ -1.37
CSNK1G3-201ENST00000345990 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
CSNK1G3-201ENST00000345990 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
CSNK1G3-201ENST00000345990 FRAS1Q86XX4 4008 aa6.46□□□□□ -1.37
CSNK1G3-201ENST00000345990 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
CSNK1G3-201ENST00000345990 FAT1Q14517 4588 aa6.45□□□□□ -1.38
CSNK1G3-201ENST00000345990 RYR1P21817 5038 aa6.43□□□□□ -1.38
CSNK1G3-201ENST00000345990 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
CSNK1G3-201ENST00000345990 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
CSNK1G3-201ENST00000345990 RYR3Q15413 4870 aa6.37□□□□□ -1.39
CSNK1G3-201ENST00000345990 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
CSNK1G3-201ENST00000345990 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
CSNK1G3-201ENST00000345990 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
CSNK1G3-201ENST00000345990 HECTD4Q9Y4D8 3996 aa6.32□□□□□ -1.4
CSNK1G3-201ENST00000345990 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
CSNK1G3-201ENST00000345990 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
CSNK1G3-201ENST00000345990 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
CSNK1G3-201ENST00000345990 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
CSNK1G3-201ENST00000345990 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
CSNK1G3-201ENST00000345990 HYDINQ4G0P3 5121 aa6.23□□□□□ -1.41
CSNK1G3-201ENST00000345990 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
CSNK1G3-201ENST00000345990 PKD1P98161 4303 aa6.2□□□□□ -1.42
CSNK1G3-201ENST00000345990 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
CSNK1G3-201ENST00000345990 HSPG2P98160 4391 aa6.13□□□□□ -1.43
CSNK1G3-201ENST00000345990 MT1HP80294 61 aa6.1□□□□□ -1.43
CSNK1G3-201ENST00000345990 HERC2O95714 4834 aa6.08□□□□□ -1.44
CSNK1G3-201ENST00000345990 KMT2CQ8NEZ4 4911 aaKnown RBP6.07□□□□□ -1.44
CSNK1G3-201ENST00000345990 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
CSNK1G3-201ENST00000345990 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
CSNK1G3-201ENST00000345990 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
CSNK1G3-201ENST00000345990 LRP1Q07954 4544 aaKnown RBP6.01□□□□□ -1.45
CSNK1G3-201ENST00000345990 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
CSNK1G3-201ENST00000345990 MT2AP02795 61 aa5.93□□□□□ -1.46
CSNK1G3-201ENST00000345990 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
CSNK1G3-201ENST00000345990 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.47
CSNK1G3-201ENST00000345990 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
CSNK1G3-201ENST00000345990 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
CSNK1G3-201ENST00000345990 HERC1Q15751 4861 aa5.82□□□□□ -1.48
CSNK1G3-201ENST00000345990 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
CSNK1G3-201ENST00000345990 MT1FP04733 61 aa5.79□□□□□ -1.48
CSNK1G3-201ENST00000345990 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
CSNK1G3-201ENST00000345990 TNXBP22105 4242 aa5.77□□□□□ -1.49
CSNK1G3-201ENST00000345990 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
CSNK1G3-201ENST00000345990 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
CSNK1G3-201ENST00000345990 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
CSNK1G3-201ENST00000345990 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.51
CSNK1G3-201ENST00000345990 LRP2P98164 4655 aa5.63□□□□□ -1.51
CSNK1G3-201ENST00000345990 PCLOQ9Y6V0 5065 aa5.62□□□□□ -1.51
CSNK1G3-201ENST00000345990 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
CSNK1G3-201ENST00000345990 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
CSNK1G3-201ENST00000345990 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.51
CSNK1G3-201ENST00000345990 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
CSNK1G3-201ENST00000345990 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
CSNK1G3-201ENST00000345990 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
CSNK1G3-201ENST00000345990 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
CSNK1G3-201ENST00000345990 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
CSNK1G3-201ENST00000345990 LPAP08519 4548 aa5.43□□□□□ -1.54
CSNK1G3-201ENST00000345990 MT1BP07438 61 aa5.41□□□□□ -1.54
CSNK1G3-201ENST00000345990 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
CSNK1G3-201ENST00000345990 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
CSNK1G3-201ENST00000345990 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
CSNK1G3-201ENST00000345990 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
CSNK1G3-201ENST00000345990 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
CSNK1G3-201ENST00000345990 MT1XP80297 61 aa5.3□□□□□ -1.56
CSNK1G3-201ENST00000345990 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
CSNK1G3-201ENST00000345990 INE1O15225 51 aa5.23□□□□□ -1.57
CSNK1G3-201ENST00000345990 LCE2DQ5TA82 110 aaPredicted RBP5.23□□□□□ -1.57
CSNK1G3-201ENST00000345990 LCE2BO14633 110 aa5.2□□□□□ -1.58
CSNK1G3-201ENST00000345990 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
CSNK1G3-201ENST00000345990 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
CSNK1G3-201ENST00000345990 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
CSNK1G3-201ENST00000345990 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
CSNK1G3-201ENST00000345990 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
CSNK1G3-201ENST00000345990 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
CSNK1G3-201ENST00000345990 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
CSNK1G3-201ENST00000345990 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
CSNK1G3-201ENST00000345990 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
CSNK1G3-201ENST00000345990 MT1GP13640 62 aa4.9□□□□□ -1.63
CSNK1G3-201ENST00000345990 SPRR2EP22531 72 aa4.88□□□□□ -1.63
CSNK1G3-201ENST00000345990 SPRR2BP35325 72 aa4.88□□□□□ -1.63
CSNK1G3-201ENST00000345990 SPRR2AP35326 72 aa4.88□□□□□ -1.63
CSNK1G3-201ENST00000345990 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
CSNK1G3-201ENST00000345990 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
CSNK1G3-201ENST00000345990 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
CSNK1G3-201ENST00000345990 MT1EP04732 61 aa4.76□□□□□ -1.65
CSNK1G3-201ENST00000345990 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
CSNK1G3-201ENST00000345990 SPRR2DP22532 72 aa4.74□□□□□ -1.65
CSNK1G3-201ENST00000345990 MUC2Q02817 5179 aa4.71□□□□□ -1.65
CSNK1G3-201ENST00000345990 MT1LQ93083 61 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms