RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 CSAG1Q6PB30 78 aa9.96□□□□□ -0.81
LYSMD4-202ENST00000344791 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
LYSMD4-202ENST00000344791 KRTAP17-1Q9BYP8 105 aa9.93□□□□□ -0.82
LYSMD4-202ENST00000344791 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
LYSMD4-202ENST00000344791 XP32Q5T750 250 aa9.89□□□□□ -0.83
LYSMD4-202ENST00000344791 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
LYSMD4-202ENST00000344791 RYR1P21817 5038 aa9.84□□□□□ -0.83
LYSMD4-202ENST00000344791 LPAP08519 4548 aa9.84□□□□□ -0.83
LYSMD4-202ENST00000344791 LINC01554Q52M75 96 aa9.81□□□□□ -0.84
LYSMD4-202ENST00000344791 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
LYSMD4-202ENST00000344791 A0A0D9SG42 100 aa9.79□□□□□ -0.84
LYSMD4-202ENST00000344791 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
LYSMD4-202ENST00000344791 S4R3F8 94 aa9.74□□□□□ -0.85
LYSMD4-202ENST00000344791 LRP2P98164 4655 aa9.72□□□□□ -0.85
LYSMD4-202ENST00000344791 KRTAP10-6P60371 365 aaPredicted RBP9.71□□□□□ -0.86
LYSMD4-202ENST00000344791 KRTAP13-4Q3LI77 160 aa9.71□□□□□ -0.86
LYSMD4-202ENST00000344791 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
LYSMD4-202ENST00000344791 K7ERS5 55 aa9.68□□□□□ -0.86
LYSMD4-202ENST00000344791 EPPK1P58107 5090 aaKnown RBP9.66□□□□□ -0.86
LYSMD4-202ENST00000344791 P0C880 135 aa9.65□□□□□ -0.86
LYSMD4-202ENST00000344791 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
LYSMD4-202ENST00000344791 ABCA13Q86UQ4 5058 aa9.61□□□□□ -0.87
LYSMD4-202ENST00000344791 KRTAP25-1Q3LHN0 102 aa9.57□□□□□ -0.88
LYSMD4-202ENST00000344791 KRTAP4-5Q9BYR2 181 aa9.47□□□□□ -0.89
LYSMD4-202ENST00000344791 ROMO1P60602 79 aa9.45□□□□□ -0.9
LYSMD4-202ENST00000344791 SPINT4Q6UDR6 99 aa9.42□□□□□ -0.9
LYSMD4-202ENST00000344791 TPRXLQ17RH7 258 aa9.4□□□□□ -0.91
LYSMD4-202ENST00000344791 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
LYSMD4-202ENST00000344791 C10orf95Q9H7T3 257 aa9.35□□□□□ -0.91
LYSMD4-202ENST00000344791 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
LYSMD4-202ENST00000344791 MUC2Q02817 5179 aa9.17□□□□□ -0.94
LYSMD4-202ENST00000344791 M0QZ58 72 aa9.17□□□□□ -0.94
LYSMD4-202ENST00000344791 J3QL48 77 aa9.14□□□□□ -0.95
LYSMD4-202ENST00000344791 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
LYSMD4-202ENST00000344791 R4GN34 69 aa9.12□□□□□ -0.95
LYSMD4-202ENST00000344791 HERC2O95714 4834 aa9.1□□□□□ -0.95
LYSMD4-202ENST00000344791 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
LYSMD4-202ENST00000344791 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
LYSMD4-202ENST00000344791 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
LYSMD4-202ENST00000344791 H3BS24 57 aa9□□□□□ -0.97
LYSMD4-202ENST00000344791 HERC1Q15751 4861 aa8.8□□□□□ -1
LYSMD4-202ENST00000344791 KRTAP19-2Q3LHN2 52 aa8.77□□□□□ -1.01
LYSMD4-202ENST00000344791 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
LYSMD4-202ENST00000344791 KRTAP15-1Q3LI76 137 aa8.68□□□□□ -1.02
LYSMD4-202ENST00000344791 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
LYSMD4-202ENST00000344791 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
LYSMD4-202ENST00000344791 NDUFAF8A1L188 74 aa8.66□□□□□ -1.02
LYSMD4-202ENST00000344791 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
LYSMD4-202ENST00000344791 FLGP20930 4061 aaPredicted RBP8.61□□□□□ -1.03
LYSMD4-202ENST00000344791 RNF213Q63HN8 5207 aa8.52□□□□□ -1.05
LYSMD4-202ENST00000344791 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
LYSMD4-202ENST00000344791 PLAC4Q8WY50 150 aa8.41□□□□□ -1.06
LYSMD4-202ENST00000344791 UBR4Q5T4S7 5183 aa8.39□□□□□ -1.07
LYSMD4-202ENST00000344791 M0R2T5 61 aa8.37□□□□□ -1.07
LYSMD4-202ENST00000344791 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
LYSMD4-202ENST00000344791 TNP1P09430 55 aa8.24□□□□□ -1.09
LYSMD4-202ENST00000344791 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
LYSMD4-202ENST00000344791 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
LYSMD4-202ENST00000344791 MT1HP80294 61 aa8.12□□□□□ -1.11
LYSMD4-202ENST00000344791 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
LYSMD4-202ENST00000344791 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
LYSMD4-202ENST00000344791 MT1FP04733 61 aa8.04□□□□□ -1.12
LYSMD4-202ENST00000344791 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
LYSMD4-202ENST00000344791 MT2AP02795 61 aa8□□□□□ -1.13
LYSMD4-202ENST00000344791 KRTAP9-8Q9BYQ0 159 aa7.91□□□□□ -1.14
LYSMD4-202ENST00000344791 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
LYSMD4-202ENST00000344791 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
LYSMD4-202ENST00000344791 MT1BP07438 61 aa7.7□□□□□ -1.18
LYSMD4-202ENST00000344791 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
LYSMD4-202ENST00000344791 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
LYSMD4-202ENST00000344791 MT1XP80297 61 aa7.66□□□□□ -1.18
LYSMD4-202ENST00000344791 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
LYSMD4-202ENST00000344791 USH2AO75445 5202 aa7.63□□□□□ -1.19
LYSMD4-202ENST00000344791 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
LYSMD4-202ENST00000344791 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
LYSMD4-202ENST00000344791 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
LYSMD4-202ENST00000344791 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
LYSMD4-202ENST00000344791 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
LYSMD4-202ENST00000344791 KMT2DO14686 5537 aa7.49□□□□□ -1.21
LYSMD4-202ENST00000344791 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
LYSMD4-202ENST00000344791 LCE2BO14633 110 aa7.34□□□□□ -1.23
LYSMD4-202ENST00000344791 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
LYSMD4-202ENST00000344791 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
LYSMD4-202ENST00000344791 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
LYSMD4-202ENST00000344791 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
LYSMD4-202ENST00000344791 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
LYSMD4-202ENST00000344791 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
LYSMD4-202ENST00000344791 LCE3CQ5T5A8 94 aa6.97□□□□□ -1.29
LYSMD4-202ENST00000344791 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.31
LYSMD4-202ENST00000344791 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
LYSMD4-202ENST00000344791 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
LYSMD4-202ENST00000344791 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
LYSMD4-202ENST00000344791 INE1O15225 51 aa6.67□□□□□ -1.34
LYSMD4-202ENST00000344791 MT1EP04732 61 aa6.61□□□□□ -1.35
LYSMD4-202ENST00000344791 MT1LQ93083 61 aa6.61□□□□□ -1.35
LYSMD4-202ENST00000344791 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
LYSMD4-202ENST00000344791 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
LYSMD4-202ENST00000344791 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
LYSMD4-202ENST00000344791 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
LYSMD4-202ENST00000344791 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms