RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 CSAG1Q6PB30 78 aa9.96□□□□□ -0.81
LYSMD4-202ENST00000344791 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
LYSMD4-202ENST00000344791 KRTAP17-1Q9BYP8 105 aa9.93□□□□□ -0.82
LYSMD4-202ENST00000344791 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
LYSMD4-202ENST00000344791 XP32Q5T750 250 aa9.89□□□□□ -0.83
LYSMD4-202ENST00000344791 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
LYSMD4-202ENST00000344791 RYR1P21817 5038 aa9.84□□□□□ -0.83
LYSMD4-202ENST00000344791 LPAP08519 4548 aa9.84□□□□□ -0.83
LYSMD4-202ENST00000344791 LINC01554Q52M75 96 aa9.81□□□□□ -0.84
LYSMD4-202ENST00000344791 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
LYSMD4-202ENST00000344791 A0A0D9SG42 100 aa9.79□□□□□ -0.84
LYSMD4-202ENST00000344791 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
LYSMD4-202ENST00000344791 S4R3F8 94 aa9.74□□□□□ -0.85
LYSMD4-202ENST00000344791 LRP2P98164 4655 aa9.72□□□□□ -0.85
LYSMD4-202ENST00000344791 KRTAP10-6P60371 365 aaPredicted RBP9.71□□□□□ -0.86
LYSMD4-202ENST00000344791 KRTAP13-4Q3LI77 160 aa9.71□□□□□ -0.86
LYSMD4-202ENST00000344791 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
LYSMD4-202ENST00000344791 K7ERS5 55 aa9.68□□□□□ -0.86
LYSMD4-202ENST00000344791 EPPK1P58107 5090 aaKnown RBP9.66□□□□□ -0.86
LYSMD4-202ENST00000344791 P0C880 135 aa9.65□□□□□ -0.86
LYSMD4-202ENST00000344791 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
LYSMD4-202ENST00000344791 ABCA13Q86UQ4 5058 aa9.61□□□□□ -0.87
LYSMD4-202ENST00000344791 KRTAP25-1Q3LHN0 102 aa9.57□□□□□ -0.88
LYSMD4-202ENST00000344791 KRTAP4-5Q9BYR2 181 aa9.47□□□□□ -0.89
LYSMD4-202ENST00000344791 ROMO1P60602 79 aa9.45□□□□□ -0.9
LYSMD4-202ENST00000344791 SPINT4Q6UDR6 99 aa9.42□□□□□ -0.9
LYSMD4-202ENST00000344791 TPRXLQ17RH7 258 aa9.4□□□□□ -0.91
LYSMD4-202ENST00000344791 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
LYSMD4-202ENST00000344791 C10orf95Q9H7T3 257 aa9.35□□□□□ -0.91
LYSMD4-202ENST00000344791 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
LYSMD4-202ENST00000344791 MUC2Q02817 5179 aa9.17□□□□□ -0.94
LYSMD4-202ENST00000344791 M0QZ58 72 aa9.17□□□□□ -0.94
LYSMD4-202ENST00000344791 J3QL48 77 aa9.14□□□□□ -0.95
LYSMD4-202ENST00000344791 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
LYSMD4-202ENST00000344791 R4GN34 69 aa9.12□□□□□ -0.95
LYSMD4-202ENST00000344791 HERC2O95714 4834 aa9.1□□□□□ -0.95
LYSMD4-202ENST00000344791 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
LYSMD4-202ENST00000344791 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
LYSMD4-202ENST00000344791 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
LYSMD4-202ENST00000344791 H3BS24 57 aa9□□□□□ -0.97
LYSMD4-202ENST00000344791 HERC1Q15751 4861 aa8.8□□□□□ -1
LYSMD4-202ENST00000344791 KRTAP19-2Q3LHN2 52 aa8.77□□□□□ -1.01
LYSMD4-202ENST00000344791 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
LYSMD4-202ENST00000344791 KRTAP15-1Q3LI76 137 aa8.68□□□□□ -1.02
LYSMD4-202ENST00000344791 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
LYSMD4-202ENST00000344791 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
LYSMD4-202ENST00000344791 NDUFAF8A1L188 74 aa8.66□□□□□ -1.02
LYSMD4-202ENST00000344791 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
LYSMD4-202ENST00000344791 FLGP20930 4061 aaPredicted RBP8.61□□□□□ -1.03
LYSMD4-202ENST00000344791 RNF213Q63HN8 5207 aa8.52□□□□□ -1.05
LYSMD4-202ENST00000344791 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
LYSMD4-202ENST00000344791 PLAC4Q8WY50 150 aa8.41□□□□□ -1.06
LYSMD4-202ENST00000344791 UBR4Q5T4S7 5183 aa8.39□□□□□ -1.07
LYSMD4-202ENST00000344791 M0R2T5 61 aa8.37□□□□□ -1.07
LYSMD4-202ENST00000344791 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
LYSMD4-202ENST00000344791 TNP1P09430 55 aa8.24□□□□□ -1.09
LYSMD4-202ENST00000344791 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
LYSMD4-202ENST00000344791 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
LYSMD4-202ENST00000344791 MT1HP80294 61 aa8.12□□□□□ -1.11
LYSMD4-202ENST00000344791 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
LYSMD4-202ENST00000344791 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
LYSMD4-202ENST00000344791 MT1FP04733 61 aa8.04□□□□□ -1.12
LYSMD4-202ENST00000344791 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
LYSMD4-202ENST00000344791 MT2AP02795 61 aa8□□□□□ -1.13
LYSMD4-202ENST00000344791 KRTAP9-8Q9BYQ0 159 aa7.91□□□□□ -1.14
LYSMD4-202ENST00000344791 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
LYSMD4-202ENST00000344791 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
LYSMD4-202ENST00000344791 MT1BP07438 61 aa7.7□□□□□ -1.18
LYSMD4-202ENST00000344791 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
LYSMD4-202ENST00000344791 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
LYSMD4-202ENST00000344791 MT1XP80297 61 aa7.66□□□□□ -1.18
LYSMD4-202ENST00000344791 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
LYSMD4-202ENST00000344791 USH2AO75445 5202 aa7.63□□□□□ -1.19
LYSMD4-202ENST00000344791 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
LYSMD4-202ENST00000344791 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
LYSMD4-202ENST00000344791 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
LYSMD4-202ENST00000344791 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
LYSMD4-202ENST00000344791 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
LYSMD4-202ENST00000344791 KMT2DO14686 5537 aa7.49□□□□□ -1.21
LYSMD4-202ENST00000344791 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
LYSMD4-202ENST00000344791 LCE2BO14633 110 aa7.34□□□□□ -1.23
LYSMD4-202ENST00000344791 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
LYSMD4-202ENST00000344791 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
LYSMD4-202ENST00000344791 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
LYSMD4-202ENST00000344791 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
LYSMD4-202ENST00000344791 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
LYSMD4-202ENST00000344791 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
LYSMD4-202ENST00000344791 LCE3CQ5T5A8 94 aa6.97□□□□□ -1.29
LYSMD4-202ENST00000344791 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.31
LYSMD4-202ENST00000344791 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
LYSMD4-202ENST00000344791 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
LYSMD4-202ENST00000344791 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
LYSMD4-202ENST00000344791 INE1O15225 51 aa6.67□□□□□ -1.34
LYSMD4-202ENST00000344791 MT1EP04732 61 aa6.61□□□□□ -1.35
LYSMD4-202ENST00000344791 MT1LQ93083 61 aa6.61□□□□□ -1.35
LYSMD4-202ENST00000344791 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
LYSMD4-202ENST00000344791 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
LYSMD4-202ENST00000344791 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
LYSMD4-202ENST00000344791 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
LYSMD4-202ENST00000344791 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms