RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
CAST-204ENST00000341926 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
CAST-204ENST00000341926 HUWE1Q7Z6Z7 4374 aaKnown RBP4.17□□□□□ -1.74
CAST-204ENST00000341926 CSMD3Q7Z407 3707 aa4.17□□□□□ -1.74
CAST-204ENST00000341926 STARD9Q9P2P6 4700 aa4.16□□□□□ -1.74
CAST-204ENST00000341926 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
CAST-204ENST00000341926 PLECQ15149 4684 aaKnown RBP4.14□□□□□ -1.75
CAST-204ENST00000341926 STAB2Q8WWQ8 2551 aa4.13□□□□□ -1.75
CAST-204ENST00000341926 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
CAST-204ENST00000341926 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
CAST-204ENST00000341926 KRTAP10-8P60410 259 aa4.11□□□□□ -1.75
CAST-204ENST00000341926 KRTAP10-2P60368 255 aa4.11□□□□□ -1.75
CAST-204ENST00000341926 KIAA1109Q2LD37 5005 aa4.1□□□□□ -1.75
CAST-204ENST00000341926 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
CAST-204ENST00000341926 KRTAP12-1P59990 96 aa4.09□□□□□ -1.76
CAST-204ENST00000341926 DNAH6Q9C0G6 4158 aa4.08□□□□□ -1.76
CAST-204ENST00000341926 FRAS1Q86XX4 4008 aa4.06□□□□□ -1.76
CAST-204ENST00000341926 KRTAP4-5Q9BYR2 181 aa4.04□□□□□ -1.76
CAST-204ENST00000341926 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
CAST-204ENST00000341926 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
CAST-204ENST00000341926 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
CAST-204ENST00000341926 A0A1B0GVY2 172 aa4.02□□□□□ -1.77
CAST-204ENST00000341926 VPS13DQ5THJ4 4388 aa4.02□□□□□ -1.77
CAST-204ENST00000341926 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
CAST-204ENST00000341926 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
CAST-204ENST00000341926 DNAH17Q9UFH2 4485 aa3.98□□□□□ -1.77
CAST-204ENST00000341926 KMT2AQ03164 3969 aa3.98□□□□□ -1.77
CAST-204ENST00000341926 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
CAST-204ENST00000341926 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
CAST-204ENST00000341926 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
CAST-204ENST00000341926 HSPG2P98160 4391 aa3.94□□□□□ -1.78
CAST-204ENST00000341926 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
CAST-204ENST00000341926 FAT2Q9NYQ8 4349 aa3.93□□□□□ -1.78
CAST-204ENST00000341926 HERC1Q15751 4861 aa3.92□□□□□ -1.78
CAST-204ENST00000341926 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
CAST-204ENST00000341926 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
CAST-204ENST00000341926 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
CAST-204ENST00000341926 M0QZ58 72 aa3.9□□□□□ -1.78
CAST-204ENST00000341926 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.78
CAST-204ENST00000341926 PKHD1P08F94 4074 aa3.9□□□□□ -1.79
CAST-204ENST00000341926 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
CAST-204ENST00000341926 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
CAST-204ENST00000341926 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
CAST-204ENST00000341926 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
CAST-204ENST00000341926 PKD1P98161 4303 aa3.88□□□□□ -1.79
CAST-204ENST00000341926 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
CAST-204ENST00000341926 KRTAP13-2Q52LG2 175 aa3.84□□□□□ -1.8
CAST-204ENST00000341926 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
CAST-204ENST00000341926 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
CAST-204ENST00000341926 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
CAST-204ENST00000341926 MYCBP2O75592 4640 aa3.79□□□□□ -1.8
CAST-204ENST00000341926 LRP1BQ9NZR2 4599 aa3.79□□□□□ -1.8
CAST-204ENST00000341926 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
CAST-204ENST00000341926 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
CAST-204ENST00000341926 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
CAST-204ENST00000341926 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
CAST-204ENST00000341926 Q5VSD8 79 aa3.76□□□□□ -1.81
CAST-204ENST00000341926 DNAH5Q8TE73 4624 aa3.73□□□□□ -1.81
CAST-204ENST00000341926 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
CAST-204ENST00000341926 PKHD1L1Q86WI1 4243 aa3.64□□□□□ -1.83
CAST-204ENST00000341926 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
CAST-204ENST00000341926 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
CAST-204ENST00000341926 C9orf92A6NGG3 77 aa3.62□□□□□ -1.83
CAST-204ENST00000341926 FAT1Q14517 4588 aa3.61□□□□□ -1.83
CAST-204ENST00000341926 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
CAST-204ENST00000341926 SMR3BP02814 79 aaPredicted RBP3.59□□□□□ -1.83
CAST-204ENST00000341926 KRTAP10-1P60331 282 aa3.59□□□□□ -1.84
CAST-204ENST00000341926 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
CAST-204ENST00000341926 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
CAST-204ENST00000341926 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
CAST-204ENST00000341926 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
CAST-204ENST00000341926 TNXBP22105 4242 aa3.53□□□□□ -1.85
CAST-204ENST00000341926 KRTAP10-4P60372 401 aaPredicted RBP3.51□□□□□ -1.85
CAST-204ENST00000341926 MT1HL1P0DM35 61 aa3.5□□□□□ -1.85
CAST-204ENST00000341926 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
CAST-204ENST00000341926 TNP1P09430 55 aa3.47□□□□□ -1.85
CAST-204ENST00000341926 LRP2P98164 4655 aa3.46□□□□□ -1.86
CAST-204ENST00000341926 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
CAST-204ENST00000341926 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
CAST-204ENST00000341926 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
CAST-204ENST00000341926 MUC2Q02817 5179 aa3.41□□□□□ -1.86
CAST-204ENST00000341926 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
CAST-204ENST00000341926 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
CAST-204ENST00000341926 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
CAST-204ENST00000341926 LPAP08519 4548 aa3.24□□□□□ -1.89
CAST-204ENST00000341926 MUC17Q685J3 4493 aa3.23□□□□□ -1.89
CAST-204ENST00000341926 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.89
CAST-204ENST00000341926 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
CAST-204ENST00000341926 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
CAST-204ENST00000341926 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
CAST-204ENST00000341926 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
CAST-204ENST00000341926 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
CAST-204ENST00000341926 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
CAST-204ENST00000341926 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CAST-204ENST00000341926 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
CAST-204ENST00000341926 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
CAST-204ENST00000341926 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
CAST-204ENST00000341926 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
CAST-204ENST00000341926 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
CAST-204ENST00000341926 MT1HP80294 61 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms