RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
BRAT1-201ENST00000340611 ABCA13Q86UQ4 5058 aa8.43□□□□□ -1.06
BRAT1-201ENST00000340611 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
BRAT1-201ENST00000340611 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
BRAT1-201ENST00000340611 IGKV2-30P06310 120 aa8.38□□□□□ -1.07
BRAT1-201ENST00000340611 A0A0A0MQY5 61 aa8.37□□□□□ -1.07
BRAT1-201ENST00000340611 H0YAA0 97 aa8.33□□□□□ -1.08
BRAT1-201ENST00000340611 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
BRAT1-201ENST00000340611 SPINT4Q6UDR6 99 aa8.32□□□□□ -1.08
BRAT1-201ENST00000340611 HERC2O95714 4834 aa8.32□□□□□ -1.08
BRAT1-201ENST00000340611 NDUFAF8A1L188 74 aa8.32□□□□□ -1.08
BRAT1-201ENST00000340611 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
BRAT1-201ENST00000340611 KRTAP16-1A8MUX0 517 aa8.26□□□□□ -1.09
BRAT1-201ENST00000340611 C9orf92A6NGG3 77 aa8.24□□□□□ -1.09
BRAT1-201ENST00000340611 PCLOQ9Y6V0 5065 aa8.21□□□□□ -1.1
BRAT1-201ENST00000340611 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
BRAT1-201ENST00000340611 A0A1B0GU33 70 aa8.16□□□□□ -1.1
BRAT1-201ENST00000340611 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.1
BRAT1-201ENST00000340611 LPAP08519 4548 aa8.11□□□□□ -1.11
BRAT1-201ENST00000340611 J3QL48 77 aa8.09□□□□□ -1.12
BRAT1-201ENST00000340611 K7ERS5 55 aa8.08□□□□□ -1.12
BRAT1-201ENST00000340611 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
BRAT1-201ENST00000340611 HERC1Q15751 4861 aa8.05□□□□□ -1.12
BRAT1-201ENST00000340611 H1FX-AS1Q4G0G2 97 aa8.05□□□□□ -1.12
BRAT1-201ENST00000340611 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
BRAT1-201ENST00000340611 LRP2P98164 4655 aa8.01□□□□□ -1.13
BRAT1-201ENST00000340611 KRTAP15-1Q3LI76 137 aa7.97□□□□□ -1.13
BRAT1-201ENST00000340611 A0A0D9SG42 100 aa7.93□□□□□ -1.14
BRAT1-201ENST00000340611 XP32Q5T750 250 aa7.92□□□□□ -1.14
BRAT1-201ENST00000340611 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
BRAT1-201ENST00000340611 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
BRAT1-201ENST00000340611 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
BRAT1-201ENST00000340611 RPL37P61927 97 aaKnown RBP7.8□□□□□ -1.16
BRAT1-201ENST00000340611 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
BRAT1-201ENST00000340611 MUC2Q02817 5179 aa7.74□□□□□ -1.17
BRAT1-201ENST00000340611 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
BRAT1-201ENST00000340611 KRTAP4-1Q9BYQ7 146 aa7.61□□□□□ -1.19
BRAT1-201ENST00000340611 UBR4Q5T4S7 5183 aa7.59□□□□□ -1.19
BRAT1-201ENST00000340611 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
BRAT1-201ENST00000340611 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
BRAT1-201ENST00000340611 KRTAP10-6P60371 365 aaPredicted RBP7.55□□□□□ -1.2
BRAT1-201ENST00000340611 S4R3F8 94 aa7.54□□□□□ -1.2
BRAT1-201ENST00000340611 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
BRAT1-201ENST00000340611 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
BRAT1-201ENST00000340611 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
BRAT1-201ENST00000340611 KRTAP3-2Q9BYR7 98 aa7.47□□□□□ -1.21
BRAT1-201ENST00000340611 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
BRAT1-201ENST00000340611 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
BRAT1-201ENST00000340611 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
BRAT1-201ENST00000340611 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
BRAT1-201ENST00000340611 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
BRAT1-201ENST00000340611 LCE2CQ5TA81 110 aa7.15□□□□□ -1.27
BRAT1-201ENST00000340611 M0QZ58 72 aa7.04□□□□□ -1.28
BRAT1-201ENST00000340611 MT1HP80294 61 aa7□□□□□ -1.29
BRAT1-201ENST00000340611 M0R2T5 61 aa7□□□□□ -1.29
BRAT1-201ENST00000340611 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
BRAT1-201ENST00000340611 R4GN34 69 aa6.91□□□□□ -1.3
BRAT1-201ENST00000340611 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
BRAT1-201ENST00000340611 MT2AP02795 61 aa6.73□□□□□ -1.33
BRAT1-201ENST00000340611 MT1FP04733 61 aa6.73□□□□□ -1.33
BRAT1-201ENST00000340611 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
BRAT1-201ENST00000340611 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
BRAT1-201ENST00000340611 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
BRAT1-201ENST00000340611 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
BRAT1-201ENST00000340611 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
BRAT1-201ENST00000340611 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
BRAT1-201ENST00000340611 USH2AO75445 5202 aa6.48□□□□□ -1.37
BRAT1-201ENST00000340611 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
BRAT1-201ENST00000340611 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
BRAT1-201ENST00000340611 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
BRAT1-201ENST00000340611 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
BRAT1-201ENST00000340611 LCE2BO14633 110 aa6.38□□□□□ -1.39
BRAT1-201ENST00000340611 TNP1P09430 55 aa6.35□□□□□ -1.39
BRAT1-201ENST00000340611 MT1BP07438 61 aa6.32□□□□□ -1.4
BRAT1-201ENST00000340611 INE1O15225 51 aa6.3□□□□□ -1.4
BRAT1-201ENST00000340611 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
BRAT1-201ENST00000340611 SSPOA2VEC9 5147 aa6.15□□□□□ -1.42
BRAT1-201ENST00000340611 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
BRAT1-201ENST00000340611 MT1XP80297 61 aa6.12□□□□□ -1.43
BRAT1-201ENST00000340611 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
BRAT1-201ENST00000340611 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
BRAT1-201ENST00000340611 KMT2DO14686 5537 aa6□□□□□ -1.45
BRAT1-201ENST00000340611 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.45
BRAT1-201ENST00000340611 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
BRAT1-201ENST00000340611 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
BRAT1-201ENST00000340611 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
BRAT1-201ENST00000340611 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.48
BRAT1-201ENST00000340611 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
BRAT1-201ENST00000340611 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
BRAT1-201ENST00000340611 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
BRAT1-201ENST00000340611 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
BRAT1-201ENST00000340611 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
BRAT1-201ENST00000340611 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
BRAT1-201ENST00000340611 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
BRAT1-201ENST00000340611 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
BRAT1-201ENST00000340611 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
BRAT1-201ENST00000340611 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
BRAT1-201ENST00000340611 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
BRAT1-201ENST00000340611 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
BRAT1-201ENST00000340611 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms