RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 H0YAA0 97 aa8.59□□□□□ -1.04
PRDM8-201ENST00000339711 HECTD4Q9Y4D8 3996 aa8.56□□□□□ -1.04
PRDM8-201ENST00000339711 DNAH6Q9C0G6 4158 aa8.53□□□□□ -1.04
PRDM8-201ENST00000339711 C10orf95Q9H7T3 257 aa8.51□□□□□ -1.05
PRDM8-201ENST00000339711 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
PRDM8-201ENST00000339711 HYDINQ4G0P3 5121 aa8.49□□□□□ -1.05
PRDM8-201ENST00000339711 FRAS1Q86XX4 4008 aa8.44□□□□□ -1.06
PRDM8-201ENST00000339711 SACSQ9NZJ4 4579 aa8.44□□□□□ -1.06
PRDM8-201ENST00000339711 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
PRDM8-201ENST00000339711 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
PRDM8-201ENST00000339711 NDUFAF8A1L188 74 aa8.4□□□□□ -1.06
PRDM8-201ENST00000339711 P0C880 135 aa8.4□□□□□ -1.07
PRDM8-201ENST00000339711 FAT2Q9NYQ8 4349 aa8.39□□□□□ -1.07
PRDM8-201ENST00000339711 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
PRDM8-201ENST00000339711 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
PRDM8-201ENST00000339711 KIAA1109Q2LD37 5005 aa8.29□□□□□ -1.08
PRDM8-201ENST00000339711 RYR2Q92736 4967 aa8.28□□□□□ -1.08
PRDM8-201ENST00000339711 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
PRDM8-201ENST00000339711 RYR3Q15413 4870 aa8.21□□□□□ -1.1
PRDM8-201ENST00000339711 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.1
PRDM8-201ENST00000339711 PKD1P98161 4303 aa8.19□□□□□ -1.1
PRDM8-201ENST00000339711 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
PRDM8-201ENST00000339711 A0A0A0MQY5 61 aa8.17□□□□□ -1.1
PRDM8-201ENST00000339711 RYR1P21817 5038 aa8.16□□□□□ -1.1
PRDM8-201ENST00000339711 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
PRDM8-201ENST00000339711 KRTAP17-1Q9BYP8 105 aa8.11□□□□□ -1.11
PRDM8-201ENST00000339711 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
PRDM8-201ENST00000339711 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
PRDM8-201ENST00000339711 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
PRDM8-201ENST00000339711 TNP1P09430 55 aa8□□□□□ -1.13
PRDM8-201ENST00000339711 KRTAP13-4Q3LI77 160 aa7.98□□□□□ -1.13
PRDM8-201ENST00000339711 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
PRDM8-201ENST00000339711 HSPG2P98160 4391 aa7.93□□□□□ -1.14
PRDM8-201ENST00000339711 FAT3Q8TDW7 4589 aa7.88□□□□□ -1.15
PRDM8-201ENST00000339711 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
PRDM8-201ENST00000339711 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
PRDM8-201ENST00000339711 EPPK1P58107 5090 aaKnown RBP7.77□□□□□ -1.17
PRDM8-201ENST00000339711 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
PRDM8-201ENST00000339711 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
PRDM8-201ENST00000339711 HERC2O95714 4834 aa7.72□□□□□ -1.17
PRDM8-201ENST00000339711 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
PRDM8-201ENST00000339711 LRP2P98164 4655 aa7.66□□□□□ -1.18
PRDM8-201ENST00000339711 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
PRDM8-201ENST00000339711 TNXBP22105 4242 aa7.59□□□□□ -1.19
PRDM8-201ENST00000339711 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
PRDM8-201ENST00000339711 BIRC6Q9NR09 4857 aa7.55□□□□□ -1.2
PRDM8-201ENST00000339711 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
PRDM8-201ENST00000339711 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.22
PRDM8-201ENST00000339711 LPAP08519 4548 aa7.44□□□□□ -1.22
PRDM8-201ENST00000339711 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.26
PRDM8-201ENST00000339711 MT1HP80294 61 aa7.19□□□□□ -1.26
PRDM8-201ENST00000339711 HERC1Q15751 4861 aa7.18□□□□□ -1.26
PRDM8-201ENST00000339711 PCLOQ9Y6V0 5065 aa7.09□□□□□ -1.27
PRDM8-201ENST00000339711 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
PRDM8-201ENST00000339711 MT2AP02795 61 aa7.04□□□□□ -1.28
PRDM8-201ENST00000339711 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
PRDM8-201ENST00000339711 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
PRDM8-201ENST00000339711 MT1FP04733 61 aa6.98□□□□□ -1.29
PRDM8-201ENST00000339711 MUC2Q02817 5179 aa6.93□□□□□ -1.3
PRDM8-201ENST00000339711 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
PRDM8-201ENST00000339711 MUC17Q685J3 4493 aa6.89□□□□□ -1.31
PRDM8-201ENST00000339711 HMCN2Q8NDA2 5059 aa6.89□□□□□ -1.31
PRDM8-201ENST00000339711 UBR4Q5T4S7 5183 aa6.87□□□□□ -1.31
PRDM8-201ENST00000339711 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
PRDM8-201ENST00000339711 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
PRDM8-201ENST00000339711 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
PRDM8-201ENST00000339711 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
PRDM8-201ENST00000339711 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
PRDM8-201ENST00000339711 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
PRDM8-201ENST00000339711 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
PRDM8-201ENST00000339711 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
PRDM8-201ENST00000339711 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
PRDM8-201ENST00000339711 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
PRDM8-201ENST00000339711 MT1BP07438 61 aa6.56□□□□□ -1.36
PRDM8-201ENST00000339711 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
PRDM8-201ENST00000339711 MT1XP80297 61 aa6.46□□□□□ -1.37
PRDM8-201ENST00000339711 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.38
PRDM8-201ENST00000339711 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
PRDM8-201ENST00000339711 INE1O15225 51 aa6.37□□□□□ -1.39
PRDM8-201ENST00000339711 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
PRDM8-201ENST00000339711 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
PRDM8-201ENST00000339711 LCE2BO14633 110 aa6.33□□□□□ -1.4
PRDM8-201ENST00000339711 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
PRDM8-201ENST00000339711 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
PRDM8-201ENST00000339711 OBSCNQ5VST9 7968 aa6.18□□□□□ -1.42
PRDM8-201ENST00000339711 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
PRDM8-201ENST00000339711 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
PRDM8-201ENST00000339711 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
PRDM8-201ENST00000339711 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
PRDM8-201ENST00000339711 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
PRDM8-201ENST00000339711 USH2AO75445 5202 aa5.92□□□□□ -1.46
PRDM8-201ENST00000339711 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
PRDM8-201ENST00000339711 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
PRDM8-201ENST00000339711 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
PRDM8-201ENST00000339711 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
PRDM8-201ENST00000339711 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.49
PRDM8-201ENST00000339711 MT1EP04732 61 aa5.69□□□□□ -1.5
PRDM8-201ENST00000339711 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
PRDM8-201ENST00000339711 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
PRDM8-201ENST00000339711 MT1LQ93083 61 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms