RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 KRTAP10-1P60331 282 aa4.99□□□□□ -1.61
RPGR-202ENST00000339363 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
RPGR-202ENST00000339363 DYNC1H1Q14204 4646 aaKnown RBP4.98□□□□□ -1.61
RPGR-202ENST00000339363 HSPG2P98160 4391 aa4.98□□□□□ -1.61
RPGR-202ENST00000339363 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
RPGR-202ENST00000339363 LPAP08519 4548 aa4.95□□□□□ -1.62
RPGR-202ENST00000339363 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
RPGR-202ENST00000339363 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
RPGR-202ENST00000339363 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
RPGR-202ENST00000339363 S4R3F8 94 aa4.91□□□□□ -1.62
RPGR-202ENST00000339363 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
RPGR-202ENST00000339363 SMR3BP02814 79 aaPredicted RBP4.85□□□□□ -1.63
RPGR-202ENST00000339363 FAT3Q8TDW7 4589 aa4.81□□□□□ -1.64
RPGR-202ENST00000339363 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
RPGR-202ENST00000339363 TNXBP22105 4242 aa4.8□□□□□ -1.64
RPGR-202ENST00000339363 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
RPGR-202ENST00000339363 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
RPGR-202ENST00000339363 RYR2Q92736 4967 aa4.77□□□□□ -1.65
RPGR-202ENST00000339363 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
RPGR-202ENST00000339363 RYR1P21817 5038 aa4.75□□□□□ -1.65
RPGR-202ENST00000339363 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
RPGR-202ENST00000339363 LRP2P98164 4655 aa4.72□□□□□ -1.65
RPGR-202ENST00000339363 RYR3Q15413 4870 aa4.71□□□□□ -1.66
RPGR-202ENST00000339363 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
RPGR-202ENST00000339363 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
RPGR-202ENST00000339363 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
RPGR-202ENST00000339363 ABCA13Q86UQ4 5058 aa4.68□□□□□ -1.66
RPGR-202ENST00000339363 KRTAP3-3Q9BYR6 98 aa4.67□□□□□ -1.66
RPGR-202ENST00000339363 XP32Q5T750 250 aa4.67□□□□□ -1.66
RPGR-202ENST00000339363 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
RPGR-202ENST00000339363 KRTAP3-2Q9BYR7 98 aa4.65□□□□□ -1.67
RPGR-202ENST00000339363 M0QZ58 72 aa4.65□□□□□ -1.67
RPGR-202ENST00000339363 KIAA1109Q2LD37 5005 aa4.63□□□□□ -1.67
RPGR-202ENST00000339363 R4GN34 69 aa4.62□□□□□ -1.67
RPGR-202ENST00000339363 HERC2O95714 4834 aa4.62□□□□□ -1.67
RPGR-202ENST00000339363 A0A1B0GVY2 172 aa4.61□□□□□ -1.67
RPGR-202ENST00000339363 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
RPGR-202ENST00000339363 MUC2Q02817 5179 aa4.59□□□□□ -1.68
RPGR-202ENST00000339363 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
RPGR-202ENST00000339363 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
RPGR-202ENST00000339363 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
RPGR-202ENST00000339363 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
RPGR-202ENST00000339363 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
RPGR-202ENST00000339363 Q5VSD8 79 aa4.35□□□□□ -1.71
RPGR-202ENST00000339363 MT1HL1P0DM35 61 aa4.34□□□□□ -1.72
RPGR-202ENST00000339363 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
RPGR-202ENST00000339363 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
RPGR-202ENST00000339363 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
RPGR-202ENST00000339363 TNP1P09430 55 aa4.27□□□□□ -1.73
RPGR-202ENST00000339363 KRTAP4-5Q9BYR2 181 aa4.26□□□□□ -1.73
RPGR-202ENST00000339363 KRTAP4-1Q9BYQ7 146 aa4.23□□□□□ -1.73
RPGR-202ENST00000339363 J3QL48 77 aa4.19□□□□□ -1.74
RPGR-202ENST00000339363 HERC1Q15751 4861 aa4.19□□□□□ -1.74
RPGR-202ENST00000339363 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
RPGR-202ENST00000339363 RNF213Q63HN8 5207 aa4.15□□□□□ -1.75
RPGR-202ENST00000339363 FLGP20930 4061 aaPredicted RBP4.14□□□□□ -1.75
RPGR-202ENST00000339363 INE1O15225 51 aa4.14□□□□□ -1.75
RPGR-202ENST00000339363 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
RPGR-202ENST00000339363 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
RPGR-202ENST00000339363 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
RPGR-202ENST00000339363 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
RPGR-202ENST00000339363 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
RPGR-202ENST00000339363 M0R2T5 61 aa3.91□□□□□ -1.78
RPGR-202ENST00000339363 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
RPGR-202ENST00000339363 USH2AO75445 5202 aa3.82□□□□□ -1.8
RPGR-202ENST00000339363 KMT2DO14686 5537 aa3.81□□□□□ -1.8
RPGR-202ENST00000339363 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
RPGR-202ENST00000339363 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
RPGR-202ENST00000339363 KRTAP19-1Q8IUB9 90 aa3.77□□□□□ -1.81
RPGR-202ENST00000339363 KRTAP9-2Q9BYQ4 174 aa3.69□□□□□ -1.82
RPGR-202ENST00000339363 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
RPGR-202ENST00000339363 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
RPGR-202ENST00000339363 MT1FP04733 61 aa3.66□□□□□ -1.82
RPGR-202ENST00000339363 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
RPGR-202ENST00000339363 MT1HP80294 61 aa3.62□□□□□ -1.83
RPGR-202ENST00000339363 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
RPGR-202ENST00000339363 MT2AP02795 61 aa3.6□□□□□ -1.83
RPGR-202ENST00000339363 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
RPGR-202ENST00000339363 KRTAP10-12P60413 245 aa3.59□□□□□ -1.84
RPGR-202ENST00000339363 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
RPGR-202ENST00000339363 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
RPGR-202ENST00000339363 MT1XP80297 61 aa3.55□□□□□ -1.84
RPGR-202ENST00000339363 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
RPGR-202ENST00000339363 MT1BP07438 61 aa3.54□□□□□ -1.84
RPGR-202ENST00000339363 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
RPGR-202ENST00000339363 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
RPGR-202ENST00000339363 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
RPGR-202ENST00000339363 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
RPGR-202ENST00000339363 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
RPGR-202ENST00000339363 KRTAP4-8A0A0G2JLE6 195 aa3.39□□□□□ -1.87
RPGR-202ENST00000339363 KRTAP4-8Q9BYQ9 185 aa3.39□□□□□ -1.87
RPGR-202ENST00000339363 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
RPGR-202ENST00000339363 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
RPGR-202ENST00000339363 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
RPGR-202ENST00000339363 LCE2BO14633 110 aa3.34□□□□□ -1.88
RPGR-202ENST00000339363 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
RPGR-202ENST00000339363 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
RPGR-202ENST00000339363 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.28□□□□□ -1.89
RPGR-202ENST00000339363 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
RPGR-202ENST00000339363 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms