RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
MUC4-202ENST00000339251 FAT1Q14517 4588 aa6.01□□□□□ -1.45
MUC4-202ENST00000339251 PKD1P98161 4303 aa5.99□□□□□ -1.45
MUC4-202ENST00000339251 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
MUC4-202ENST00000339251 KIAA1109Q2LD37 5005 aa5.99□□□□□ -1.45
MUC4-202ENST00000339251 DYNC1H1Q14204 4646 aaKnown RBP5.97□□□□□ -1.45
MUC4-202ENST00000339251 P0C880 135 aa5.92□□□□□ -1.46
MUC4-202ENST00000339251 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
MUC4-202ENST00000339251 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
MUC4-202ENST00000339251 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
MUC4-202ENST00000339251 A0A1B0GVY2 172 aa5.9□□□□□ -1.47
MUC4-202ENST00000339251 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
MUC4-202ENST00000339251 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
MUC4-202ENST00000339251 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
MUC4-202ENST00000339251 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
MUC4-202ENST00000339251 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
MUC4-202ENST00000339251 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
MUC4-202ENST00000339251 KRTAP10-8P60410 259 aa5.79□□□□□ -1.48
MUC4-202ENST00000339251 XP32Q5T750 250 aa5.79□□□□□ -1.48
MUC4-202ENST00000339251 KRTAP3-2Q9BYR7 98 aa5.79□□□□□ -1.48
MUC4-202ENST00000339251 LRP1Q07954 4544 aaKnown RBP5.78□□□□□ -1.48
MUC4-202ENST00000339251 Q5VSD8 79 aa5.77□□□□□ -1.49
MUC4-202ENST00000339251 KRTAP17-1Q9BYP8 105 aa5.76□□□□□ -1.49
MUC4-202ENST00000339251 HSPG2P98160 4391 aa5.76□□□□□ -1.49
MUC4-202ENST00000339251 RYR1P21817 5038 aa5.74□□□□□ -1.49
MUC4-202ENST00000339251 M0QZ58 72 aa5.74□□□□□ -1.49
MUC4-202ENST00000339251 R4GN34 69 aa5.72□□□□□ -1.49
MUC4-202ENST00000339251 KRTAP12-1P59990 96 aa5.71□□□□□ -1.49
MUC4-202ENST00000339251 KRTAP10-4P60372 401 aaPredicted RBP5.71□□□□□ -1.5
MUC4-202ENST00000339251 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
MUC4-202ENST00000339251 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
MUC4-202ENST00000339251 FAT3Q8TDW7 4589 aa5.65□□□□□ -1.51
MUC4-202ENST00000339251 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
MUC4-202ENST00000339251 HERC2O95714 4834 aa5.63□□□□□ -1.51
MUC4-202ENST00000339251 BIRC6Q9NR09 4857 aa5.61□□□□□ -1.51
MUC4-202ENST00000339251 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
MUC4-202ENST00000339251 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
MUC4-202ENST00000339251 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
MUC4-202ENST00000339251 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
MUC4-202ENST00000339251 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
MUC4-202ENST00000339251 J3QL48 77 aa5.51□□□□□ -1.53
MUC4-202ENST00000339251 HERC1Q15751 4861 aa5.51□□□□□ -1.53
MUC4-202ENST00000339251 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
MUC4-202ENST00000339251 TNXBP22105 4242 aa5.41□□□□□ -1.54
MUC4-202ENST00000339251 LPAP08519 4548 aa5.4□□□□□ -1.55
MUC4-202ENST00000339251 LRP2P98164 4655 aa5.37□□□□□ -1.55
MUC4-202ENST00000339251 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
MUC4-202ENST00000339251 MUC2Q02817 5179 aa5.32□□□□□ -1.56
MUC4-202ENST00000339251 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
MUC4-202ENST00000339251 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
MUC4-202ENST00000339251 TNP1P09430 55 aa5.25□□□□□ -1.57
MUC4-202ENST00000339251 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
MUC4-202ENST00000339251 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.59
MUC4-202ENST00000339251 KRTAP4-1Q9BYQ7 146 aa5.08□□□□□ -1.6
MUC4-202ENST00000339251 FAT4Q6V0I7 4981 aa5.07□□□□□ -1.6
MUC4-202ENST00000339251 M0R2T5 61 aa5.05□□□□□ -1.6
MUC4-202ENST00000339251 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
MUC4-202ENST00000339251 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
MUC4-202ENST00000339251 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
MUC4-202ENST00000339251 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
MUC4-202ENST00000339251 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
MUC4-202ENST00000339251 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
MUC4-202ENST00000339251 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
MUC4-202ENST00000339251 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
MUC4-202ENST00000339251 FLGP20930 4061 aaPredicted RBP4.69□□□□□ -1.66
MUC4-202ENST00000339251 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
MUC4-202ENST00000339251 INE1O15225 51 aa4.64□□□□□ -1.67
MUC4-202ENST00000339251 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
MUC4-202ENST00000339251 LCE2CQ5TA81 110 aa4.62□□□□□ -1.67
MUC4-202ENST00000339251 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
MUC4-202ENST00000339251 MT1HP80294 61 aa4.59□□□□□ -1.67
MUC4-202ENST00000339251 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
MUC4-202ENST00000339251 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
MUC4-202ENST00000339251 MT1FP04733 61 aa4.53□□□□□ -1.68
MUC4-202ENST00000339251 MT2AP02795 61 aa4.52□□□□□ -1.69
MUC4-202ENST00000339251 USH2AO75445 5202 aa4.52□□□□□ -1.69
MUC4-202ENST00000339251 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
MUC4-202ENST00000339251 MT1XP80297 61 aa4.39□□□□□ -1.71
MUC4-202ENST00000339251 KRTAP19-8Q3LI54 63 aa4.39□□□□□ -1.71
MUC4-202ENST00000339251 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
MUC4-202ENST00000339251 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
MUC4-202ENST00000339251 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
MUC4-202ENST00000339251 MT1BP07438 61 aa4.36□□□□□ -1.71
MUC4-202ENST00000339251 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
MUC4-202ENST00000339251 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
MUC4-202ENST00000339251 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
MUC4-202ENST00000339251 LCE2BO14633 110 aa4.18□□□□□ -1.74
MUC4-202ENST00000339251 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
MUC4-202ENST00000339251 KMT2DO14686 5537 aa4.12□□□□□ -1.75
MUC4-202ENST00000339251 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
MUC4-202ENST00000339251 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
MUC4-202ENST00000339251 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
MUC4-202ENST00000339251 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
MUC4-202ENST00000339251 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
MUC4-202ENST00000339251 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
MUC4-202ENST00000339251 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
MUC4-202ENST00000339251 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
MUC4-202ENST00000339251 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
MUC4-202ENST00000339251 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.79
MUC4-202ENST00000339251 LCE2DQ5TA82 110 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms