RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 A6NN06 94 aa2.92□□□□□ -1.94
PRPF4B-201ENST00000337659 LINC00313P59037 77 aa2.92□□□□□ -1.94
PRPF4B-201ENST00000337659 C9orf92A6NGG3 77 aa2.91□□□□□ -1.94
PRPF4B-201ENST00000337659 TPRXLQ17RH7 258 aa2.9□□□□□ -1.94
PRPF4B-201ENST00000337659 Q5W150 140 aa2.9□□□□□ -1.94
PRPF4B-201ENST00000337659 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
PRPF4B-201ENST00000337659 H0Y9P7 68 aa2.89□□□□□ -1.95
PRPF4B-201ENST00000337659 Q1T7F1 81 aa2.88□□□□□ -1.95
PRPF4B-201ENST00000337659 A8MUN3 132 aa2.87□□□□□ -1.95
PRPF4B-201ENST00000337659 RPL37P61927 97 aaKnown RBP2.87□□□□□ -1.95
PRPF4B-201ENST00000337659 LCE2AQ5TA79 106 aaPredicted RBP2.87□□□□□ -1.95
PRPF4B-201ENST00000337659 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
PRPF4B-201ENST00000337659 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
PRPF4B-201ENST00000337659 A0A1B0GU69 56 aa2.86□□□□□ -1.95
PRPF4B-201ENST00000337659 CRIPTQ9P021 101 aa2.86□□□□□ -1.95
PRPF4B-201ENST00000337659 C1orf64Q8NEQ6 169 aa2.86□□□□□ -1.95
PRPF4B-201ENST00000337659 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
PRPF4B-201ENST00000337659 LCA10Q71F78 164 aa2.84□□□□□ -1.96
PRPF4B-201ENST00000337659 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
PRPF4B-201ENST00000337659 A0A0D9SG42 100 aa2.82□□□□□ -1.96
PRPF4B-201ENST00000337659 KRTAP3-1Q9BYR8 98 aa2.82□□□□□ -1.96
PRPF4B-201ENST00000337659 HRES1P13985 223 aa2.81□□□□□ -1.96
PRPF4B-201ENST00000337659 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
PRPF4B-201ENST00000337659 PRAC1Q96KF2 57 aa2.8□□□□□ -1.96
PRPF4B-201ENST00000337659 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
PRPF4B-201ENST00000337659 LINC01558Q9Y6Z2 57 aa2.79□□□□□ -1.96
PRPF4B-201ENST00000337659 KRTAP9-6A0A140TA67 174 aa2.79□□□□□ -1.96
PRPF4B-201ENST00000337659 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
PRPF4B-201ENST00000337659 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
PRPF4B-201ENST00000337659 LCE2BO14633 110 aa2.77□□□□□ -1.97
PRPF4B-201ENST00000337659 COA5Q86WW8 74 aa2.75□□□□□ -1.97
PRPF4B-201ENST00000337659 H0YAA0 97 aa2.75□□□□□ -1.97
PRPF4B-201ENST00000337659 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
PRPF4B-201ENST00000337659 LPAP08519 4548 aa2.75□□□□□ -1.97
PRPF4B-201ENST00000337659 PLAC4Q8WY50 150 aa2.75□□□□□ -1.97
PRPF4B-201ENST00000337659 SEC61BP60468 96 aaKnown RBP2.74□□□□□ -1.97
PRPF4B-201ENST00000337659 Q5VV11 94 aa2.71□□□□□ -1.97
PRPF4B-201ENST00000337659 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
PRPF4B-201ENST00000337659 CSAG1Q6PB30 78 aa2.71□□□□□ -1.98
PRPF4B-201ENST00000337659 SPINK7P58062 85 aa2.71□□□□□ -1.98
PRPF4B-201ENST00000337659 R4GN34 69 aa2.71□□□□□ -1.98
PRPF4B-201ENST00000337659 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
PRPF4B-201ENST00000337659 UQCR11O14957 56 aa2.7□□□□□ -1.98
PRPF4B-201ENST00000337659 LRP2P98164 4655 aa2.7□□□□□ -1.98
PRPF4B-201ENST00000337659 KRTAP4-1Q9BYQ7 146 aa2.68□□□□□ -1.98
PRPF4B-201ENST00000337659 LCE2CQ5TA81 110 aa2.67□□□□□ -1.98
PRPF4B-201ENST00000337659 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.98
PRPF4B-201ENST00000337659 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
PRPF4B-201ENST00000337659 KRTAP10-6P60371 365 aaPredicted RBP2.64□□□□□ -1.99
PRPF4B-201ENST00000337659 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
PRPF4B-201ENST00000337659 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
PRPF4B-201ENST00000337659 CRCT1Q9UGL9 99 aa2.61□□□□□ -1.99
PRPF4B-201ENST00000337659 M0QZ58 72 aa2.6□□□□□ -1.99
PRPF4B-201ENST00000337659 S4R3F8 94 aa2.59□□□□□ -1.99
PRPF4B-201ENST00000337659 ROMO1P60602 79 aa2.58□□□□□ -2
PRPF4B-201ENST00000337659 A0A1B0GU33 70 aa2.58□□□□□ -2
PRPF4B-201ENST00000337659 KRTAP15-1Q3LI76 137 aa2.55□□□□□ -2
PRPF4B-201ENST00000337659 LORP23490 312 aaPredicted RBP2.54□□□□□ -2
PRPF4B-201ENST00000337659 MUC2Q02817 5179 aa2.53□□□□□ -2
PRPF4B-201ENST00000337659 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
PRPF4B-201ENST00000337659 MT1HP80294 61 aa2.51□□□□□ -2.01
PRPF4B-201ENST00000337659 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
PRPF4B-201ENST00000337659 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
PRPF4B-201ENST00000337659 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
PRPF4B-201ENST00000337659 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
PRPF4B-201ENST00000337659 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
PRPF4B-201ENST00000337659 KRTAP19-8Q3LI54 63 aa2.47□□□□□ -2.01
PRPF4B-201ENST00000337659 KRTAP9-7A8MTY7 169 aa2.45□□□□□ -2.02
PRPF4B-201ENST00000337659 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
PRPF4B-201ENST00000337659 KRTAP19-1Q8IUB9 90 aa2.43□□□□□ -2.02
PRPF4B-201ENST00000337659 KRTAP23-1A1A580 65 aa2.42□□□□□ -2.02
PRPF4B-201ENST00000337659 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
PRPF4B-201ENST00000337659 MT2AP02795 61 aa2.41□□□□□ -2.02
PRPF4B-201ENST00000337659 LOC100996750A0A140TA64 210 aa2.41□□□□□ -2.02
PRPF4B-201ENST00000337659 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
PRPF4B-201ENST00000337659 KRTAP9-3Q9BYQ3 159 aa2.41□□□□□ -2.02
PRPF4B-201ENST00000337659 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
PRPF4B-201ENST00000337659 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
PRPF4B-201ENST00000337659 TNP1P09430 55 aa2.38□□□□□ -2.03
PRPF4B-201ENST00000337659 MT1FP04733 61 aa2.38□□□□□ -2.03
PRPF4B-201ENST00000337659 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
PRPF4B-201ENST00000337659 KRTAP19-6Q3LI70 58 aa2.37□□□□□ -2.03
PRPF4B-201ENST00000337659 KRTAP12-2P59991 146 aa2.37□□□□□ -2.03
PRPF4B-201ENST00000337659 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
PRPF4B-201ENST00000337659 MT1BP07438 61 aa2.34□□□□□ -2.03
PRPF4B-201ENST00000337659 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.04
PRPF4B-201ENST00000337659 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
PRPF4B-201ENST00000337659 USH2AO75445 5202 aa2.29□□□□□ -2.04
PRPF4B-201ENST00000337659 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
PRPF4B-201ENST00000337659 MT1XP80297 61 aa2.26□□□□□ -2.05
PRPF4B-201ENST00000337659 KRTAP5-9P26371 169 aa2.26□□□□□ -2.05
PRPF4B-201ENST00000337659 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
PRPF4B-201ENST00000337659 KRTAP10-12P60413 245 aa2.24□□□□□ -2.05
PRPF4B-201ENST00000337659 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
PRPF4B-201ENST00000337659 NEBP20929 6669 aa2.21□□□□□ -2.06
PRPF4B-201ENST00000337659 KRTAP19-4Q3LI73 84 aa2.2□□□□□ -2.06
PRPF4B-201ENST00000337659 KRTAP4-8Q9BYQ9 185 aa2.2□□□□□ -2.06
PRPF4B-201ENST00000337659 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
PRPF4B-201ENST00000337659 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
PRPF4B-201ENST00000337659 KRTAP2-2Q9BYT5 123 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms