RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 CSAG1Q6PB30 78 aa12.34□□□□□ -0.43
CLPTM1-201ENST00000337392 LRP2P98164 4655 aa12.32□□□□□ -0.44
CLPTM1-201ENST00000337392 SPATA8Q6RVD6 105 aa12.29□□□□□ -0.44
CLPTM1-201ENST00000337392 KRTAP3-1Q9BYR8 98 aa12.27□□□□□ -0.44
CLPTM1-201ENST00000337392 MT1HL1P0DM35 61 aa12.26□□□□□ -0.45
CLPTM1-201ENST00000337392 KRTAP4-5Q9BYR2 181 aa12.25□□□□□ -0.45
CLPTM1-201ENST00000337392 A0A1B0GU69 56 aa12.18□□□□□ -0.46
CLPTM1-201ENST00000337392 MIR22HGQ0VDD5 57 aa12.17□□□□□ -0.46
CLPTM1-201ENST00000337392 XP32Q5T750 250 aa12.15□□□□□ -0.46
CLPTM1-201ENST00000337392 UQCR11O14957 56 aa12.07□□□□□ -0.48
CLPTM1-201ENST00000337392 HERC2O95714 4834 aa12.04□□□□□ -0.48
CLPTM1-201ENST00000337392 RPL37P61927 97 aaKnown RBP12.04□□□□□ -0.48
CLPTM1-201ENST00000337392 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
CLPTM1-201ENST00000337392 ROMO1P60602 79 aa11.92□□□□□ -0.5
CLPTM1-201ENST00000337392 KRTAP25-1Q3LHN0 102 aa11.83□□□□□ -0.52
CLPTM1-201ENST00000337392 MUC2Q02817 5179 aa11.77□□□□□ -0.52
CLPTM1-201ENST00000337392 KRTAP3-3Q9BYR6 98 aa11.75□□□□□ -0.53
CLPTM1-201ENST00000337392 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
CLPTM1-201ENST00000337392 HERC1Q15751 4861 aa11.7□□□□□ -0.54
CLPTM1-201ENST00000337392 P0C880 135 aa11.7□□□□□ -0.54
CLPTM1-201ENST00000337392 TPRXLQ17RH7 258 aa11.69□□□□□ -0.54
CLPTM1-201ENST00000337392 H0YAA0 97 aa11.68□□□□□ -0.54
CLPTM1-201ENST00000337392 PCLOQ9Y6V0 5065 aa11.66□□□□□ -0.54
CLPTM1-201ENST00000337392 A0A1B0GU33 70 aa11.6□□□□□ -0.55
CLPTM1-201ENST00000337392 S4R3F8 94 aa11.6□□□□□ -0.55
CLPTM1-201ENST00000337392 MUC17Q685J3 4493 aa11.59□□□□□ -0.55
CLPTM1-201ENST00000337392 J3QL48 77 aa11.58□□□□□ -0.55
CLPTM1-201ENST00000337392 H1FX-AS1Q4G0G2 97 aa11.56□□□□□ -0.56
CLPTM1-201ENST00000337392 CRIPTQ9P021 101 aa11.54□□□□□ -0.56
CLPTM1-201ENST00000337392 KRTAP10-6P60371 365 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-201ENST00000337392 KRTAP3-2Q9BYR7 98 aa11.45□□□□□ -0.58
CLPTM1-201ENST00000337392 KRTAP4-1Q9BYQ7 146 aa11.45□□□□□ -0.58
CLPTM1-201ENST00000337392 KRTAP13-4Q3LI77 160 aa11.44□□□□□ -0.58
CLPTM1-201ENST00000337392 A0A0D9SG42 100 aa11.36□□□□□ -0.59
CLPTM1-201ENST00000337392 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
CLPTM1-201ENST00000337392 SEC61BP60468 96 aaKnown RBP11.24□□□□□ -0.61
CLPTM1-201ENST00000337392 NDUFAF8A1L188 74 aa11.2□□□□□ -0.62
CLPTM1-201ENST00000337392 FAT4Q6V0I7 4981 aa11.18□□□□□ -0.62
CLPTM1-201ENST00000337392 SPINT4Q6UDR6 99 aa11.18□□□□□ -0.62
CLPTM1-201ENST00000337392 RNF213Q63HN8 5207 aa11.16□□□□□ -0.62
CLPTM1-201ENST00000337392 A0A0A0MQY5 61 aa11.12□□□□□ -0.63
CLPTM1-201ENST00000337392 K7ERS5 55 aa11.06□□□□□ -0.64
CLPTM1-201ENST00000337392 KRTAP15-1Q3LI76 137 aa11.06□□□□□ -0.64
CLPTM1-201ENST00000337392 UBR4Q5T4S7 5183 aa11.06□□□□□ -0.64
CLPTM1-201ENST00000337392 KRTAP19-2Q3LHN2 52 aa11.04□□□□□ -0.64
CLPTM1-201ENST00000337392 KRTAP12-2P59991 146 aa10.99□□□□□ -0.65
CLPTM1-201ENST00000337392 FLGP20930 4061 aaPredicted RBP10.99□□□□□ -0.65
CLPTM1-201ENST00000337392 LORP23490 312 aaPredicted RBP10.99□□□□□ -0.65
CLPTM1-201ENST00000337392 C10orf95Q9H7T3 257 aa10.93□□□□□ -0.66
CLPTM1-201ENST00000337392 M0QZ58 72 aa10.87□□□□□ -0.67
CLPTM1-201ENST00000337392 KRTAP12-1P59990 96 aa10.86□□□□□ -0.67
CLPTM1-201ENST00000337392 R4GN34 69 aa10.79□□□□□ -0.68
CLPTM1-201ENST00000337392 LCE2CQ5TA81 110 aa10.57□□□□□ -0.72
CLPTM1-201ENST00000337392 LUZP6Q538Z0 58 aa10.5□□□□□ -0.73
CLPTM1-201ENST00000337392 M0R2T5 61 aa10.36□□□□□ -0.75
CLPTM1-201ENST00000337392 MT1HP80294 61 aa10.3□□□□□ -0.76
CLPTM1-201ENST00000337392 CAMK2N1Q7Z7J9 78 aa10.2□□□□□ -0.78
CLPTM1-201ENST00000337392 MT1FP04733 61 aa10.08□□□□□ -0.8
CLPTM1-201ENST00000337392 KRTAP19-1Q8IUB9 90 aa10.07□□□□□ -0.8
CLPTM1-201ENST00000337392 PLAC4Q8WY50 150 aa10.05□□□□□ -0.8
CLPTM1-201ENST00000337392 MT2AP02795 61 aa10.04□□□□□ -0.8
CLPTM1-201ENST00000337392 KRTAP10-10P60014 251 aa10.03□□□□□ -0.8
CLPTM1-201ENST00000337392 KRTAP9-8Q9BYQ0 159 aa10□□□□□ -0.81
CLPTM1-201ENST00000337392 SPRR2GQ9BYE4 73 aa9.94□□□□□ -0.82
CLPTM1-201ENST00000337392 USH2AO75445 5202 aa9.82□□□□□ -0.84
CLPTM1-201ENST00000337392 TNP1P09430 55 aa9.65□□□□□ -0.86
CLPTM1-201ENST00000337392 MT1BP07438 61 aa9.6□□□□□ -0.87
CLPTM1-201ENST00000337392 KRTAP9-3Q9BYQ3 159 aa9.57□□□□□ -0.88
CLPTM1-201ENST00000337392 KRTAP19-8Q3LI54 63 aa9.53□□□□□ -0.88
CLPTM1-201ENST00000337392 PP632Q6XCG6 107 aa9.46□□□□□ -0.9
CLPTM1-201ENST00000337392 KRTAP10-5P60370 271 aa9.44□□□□□ -0.9
CLPTM1-201ENST00000337392 MT1XP80297 61 aa9.44□□□□□ -0.9
CLPTM1-201ENST00000337392 KMT2DO14686 5537 aa9.43□□□□□ -0.9
CLPTM1-201ENST00000337392 LCE3AQ5TA76 89 aa9.39□□□□□ -0.91
CLPTM1-201ENST00000337392 LCE2AQ5TA79 106 aaPredicted RBP9.37□□□□□ -0.91
CLPTM1-201ENST00000337392 LCE2BO14633 110 aa9.36□□□□□ -0.91
CLPTM1-201ENST00000337392 FSIP2Q5CZC0 6907 aa9.32□□□□□ -0.92
CLPTM1-201ENST00000337392 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
CLPTM1-201ENST00000337392 SPRR5A0A1B0GTR4 108 aa9.19□□□□□ -0.94
CLPTM1-201ENST00000337392 PRO2289Q9P1D8 64 aa9.16□□□□□ -0.94
CLPTM1-201ENST00000337392 KRTAP23-1A1A580 65 aa9.15□□□□□ -0.94
CLPTM1-201ENST00000337392 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
CLPTM1-201ENST00000337392 SSPOA2VEC9 5147 aa9□□□□□ -0.97
CLPTM1-201ENST00000337392 KRTAP8-1Q8IUC2 63 aa8.95□□□□□ -0.98
CLPTM1-201ENST00000337392 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
CLPTM1-201ENST00000337392 KRTAP4-8Q9BYQ9 185 aa8.88□□□□□ -0.99
CLPTM1-201ENST00000337392 KRTAP12-3P60328 96 aa8.86□□□□□ -0.99
CLPTM1-201ENST00000337392 INE1O15225 51 aa8.77□□□□□ -1.01
CLPTM1-201ENST00000337392 KRTAP19-5Q3LI72 72 aa8.73□□□□□ -1.01
CLPTM1-201ENST00000337392 FCGBPQ9Y6R7 5405 aaPredicted RBP8.47□□□□□ -1.05
CLPTM1-201ENST00000337392 KRTAP19-7Q3SYF9 63 aa8.42□□□□□ -1.06
CLPTM1-201ENST00000337392 MUC12Q9UKN1 5478 aa8.41□□□□□ -1.06
CLPTM1-201ENST00000337392 KRTAP4-7Q9BYR0 210 aa8.37□□□□□ -1.07
CLPTM1-201ENST00000337392 KRTAP19-6Q3LI70 58 aa8.33□□□□□ -1.08
CLPTM1-201ENST00000337392 LCE3CQ5T5A8 94 aa8.3□□□□□ -1.08
CLPTM1-201ENST00000337392 KRTAP9-6A8MVA2 160 aa8.16□□□□□ -1.1
CLPTM1-201ENST00000337392 MT1EP04732 61 aa8.16□□□□□ -1.1
CLPTM1-201ENST00000337392 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
CLPTM1-201ENST00000337392 MT1LQ93083 61 aa8.1□□□□□ -1.11
CLPTM1-201ENST00000337392 DSTQ03001 7570 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms