RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 A8MUU9 505 aa5.55□□□□□ -1.52
HIF1A-202ENST00000337138 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
HIF1A-202ENST00000337138 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
HIF1A-202ENST00000337138 KRTAP10-4P60372 401 aaPredicted RBP5.54□□□□□ -1.52
HIF1A-202ENST00000337138 H0YAA0 97 aa5.52□□□□□ -1.53
HIF1A-202ENST00000337138 LPAP08519 4548 aa5.52□□□□□ -1.53
HIF1A-202ENST00000337138 RYR3Q15413 4870 aa5.5□□□□□ -1.53
HIF1A-202ENST00000337138 M0R2T5 61 aa5.49□□□□□ -1.53
HIF1A-202ENST00000337138 NDUFAF8A1L188 74 aa5.49□□□□□ -1.53
HIF1A-202ENST00000337138 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
HIF1A-202ENST00000337138 KRTAP3-1Q9BYR8 98 aa5.44□□□□□ -1.54
HIF1A-202ENST00000337138 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
HIF1A-202ENST00000337138 RPS29P62273 56 aaKnown RBP5.4□□□□□ -1.55
HIF1A-202ENST00000337138 RYR1P21817 5038 aa5.38□□□□□ -1.55
HIF1A-202ENST00000337138 A0A1B0GVY2 172 aa5.36□□□□□ -1.55
HIF1A-202ENST00000337138 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
HIF1A-202ENST00000337138 KRTAP17-1Q9BYP8 105 aa5.3□□□□□ -1.56
HIF1A-202ENST00000337138 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
HIF1A-202ENST00000337138 P0C880 135 aa5.29□□□□□ -1.56
HIF1A-202ENST00000337138 S4R3F8 94 aa5.28□□□□□ -1.56
HIF1A-202ENST00000337138 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
HIF1A-202ENST00000337138 KRTAP3-3Q9BYR6 98 aa5.23□□□□□ -1.57
HIF1A-202ENST00000337138 LRP2P98164 4655 aa5.22□□□□□ -1.57
HIF1A-202ENST00000337138 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.57
HIF1A-202ENST00000337138 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
HIF1A-202ENST00000337138 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
HIF1A-202ENST00000337138 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
HIF1A-202ENST00000337138 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
HIF1A-202ENST00000337138 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
HIF1A-202ENST00000337138 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.59
HIF1A-202ENST00000337138 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.59
HIF1A-202ENST00000337138 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
HIF1A-202ENST00000337138 XP32Q5T750 250 aa5.13□□□□□ -1.59
HIF1A-202ENST00000337138 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
HIF1A-202ENST00000337138 M0QZ58 72 aa5.13□□□□□ -1.59
HIF1A-202ENST00000337138 R4GN34 69 aa5.13□□□□□ -1.59
HIF1A-202ENST00000337138 CAMK2N1Q7Z7J9 78 aa5.08□□□□□ -1.6
HIF1A-202ENST00000337138 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
HIF1A-202ENST00000337138 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
HIF1A-202ENST00000337138 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
HIF1A-202ENST00000337138 MT1HL1P0DM35 61 aa5.01□□□□□ -1.61
HIF1A-202ENST00000337138 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
HIF1A-202ENST00000337138 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
HIF1A-202ENST00000337138 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
HIF1A-202ENST00000337138 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.62
HIF1A-202ENST00000337138 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
HIF1A-202ENST00000337138 MUC2Q02817 5179 aa4.87□□□□□ -1.63
HIF1A-202ENST00000337138 PCLOQ9Y6V0 5065 aa4.87□□□□□ -1.63
HIF1A-202ENST00000337138 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
HIF1A-202ENST00000337138 HERC2O95714 4834 aa4.77□□□□□ -1.65
HIF1A-202ENST00000337138 HERC1Q15751 4861 aa4.76□□□□□ -1.65
HIF1A-202ENST00000337138 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
HIF1A-202ENST00000337138 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
HIF1A-202ENST00000337138 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
HIF1A-202ENST00000337138 TNP1P09430 55 aa4.66□□□□□ -1.66
HIF1A-202ENST00000337138 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
HIF1A-202ENST00000337138 FAT4Q6V0I7 4981 aa4.57□□□□□ -1.68
HIF1A-202ENST00000337138 UBR4Q5T4S7 5183 aa4.55□□□□□ -1.68
HIF1A-202ENST00000337138 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
HIF1A-202ENST00000337138 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
HIF1A-202ENST00000337138 RNF213Q63HN8 5207 aa4.4□□□□□ -1.7
HIF1A-202ENST00000337138 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
HIF1A-202ENST00000337138 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
HIF1A-202ENST00000337138 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
HIF1A-202ENST00000337138 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
HIF1A-202ENST00000337138 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
HIF1A-202ENST00000337138 LCE3AQ5TA76 89 aa4.21□□□□□ -1.73
HIF1A-202ENST00000337138 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
HIF1A-202ENST00000337138 MT1HP80294 61 aa4.14□□□□□ -1.75
HIF1A-202ENST00000337138 INE1O15225 51 aa4.12□□□□□ -1.75
HIF1A-202ENST00000337138 MT1FP04733 61 aa4.11□□□□□ -1.75
HIF1A-202ENST00000337138 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
HIF1A-202ENST00000337138 MT2AP02795 61 aa4.08□□□□□ -1.76
HIF1A-202ENST00000337138 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
HIF1A-202ENST00000337138 MT1BP07438 61 aa4.05□□□□□ -1.76
HIF1A-202ENST00000337138 MT1XP80297 61 aa4.03□□□□□ -1.76
HIF1A-202ENST00000337138 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
HIF1A-202ENST00000337138 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
HIF1A-202ENST00000337138 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
HIF1A-202ENST00000337138 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
HIF1A-202ENST00000337138 USH2AO75445 5202 aa3.97□□□□□ -1.77
HIF1A-202ENST00000337138 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
HIF1A-202ENST00000337138 KMT2DO14686 5537 aa3.93□□□□□ -1.78
HIF1A-202ENST00000337138 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
HIF1A-202ENST00000337138 CRCT1Q9UGL9 99 aa3.85□□□□□ -1.79
HIF1A-202ENST00000337138 LCE2BO14633 110 aa3.8□□□□□ -1.8
HIF1A-202ENST00000337138 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
HIF1A-202ENST00000337138 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
HIF1A-202ENST00000337138 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
HIF1A-202ENST00000337138 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
HIF1A-202ENST00000337138 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
HIF1A-202ENST00000337138 SSPOA2VEC9 5147 aa3.77□□□□□ -1.81
HIF1A-202ENST00000337138 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
HIF1A-202ENST00000337138 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
HIF1A-202ENST00000337138 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
HIF1A-202ENST00000337138 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
HIF1A-202ENST00000337138 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.81
HIF1A-202ENST00000337138 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
HIF1A-202ENST00000337138 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
HIF1A-202ENST00000337138 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms