RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
SPNS1-203ENST00000334536 COX6B2Q6YFQ2 88 aa10.98□□□□□ -0.65
SPNS1-203ENST00000334536 TPRXLQ17RH7 258 aa10.97□□□□□ -0.65
SPNS1-203ENST00000334536 RPL37P61927 97 aaKnown RBP10.96□□□□□ -0.66
SPNS1-203ENST00000334536 FAT1Q14517 4588 aa10.87□□□□□ -0.67
SPNS1-203ENST00000334536 KRTAP3-1Q9BYR8 98 aa10.84□□□□□ -0.67
SPNS1-203ENST00000334536 FLG2Q5D862 2391 aaPredicted RBP10.81□□□□□ -0.68
SPNS1-203ENST00000334536 HSPG2P98160 4391 aa10.72□□□□□ -0.69
SPNS1-203ENST00000334536 KRTAP10-8P60410 259 aa10.71□□□□□ -0.69
SPNS1-203ENST00000334536 EPPK1P58107 5090 aaKnown RBP10.68□□□□□ -0.7
SPNS1-203ENST00000334536 RYR1P21817 5038 aa10.67□□□□□ -0.7
SPNS1-203ENST00000334536 C10orf95Q9H7T3 257 aa10.66□□□□□ -0.7
SPNS1-203ENST00000334536 Q5VSD8 79 aa10.65□□□□□ -0.71
SPNS1-203ENST00000334536 KIAA1109Q2LD37 5005 aa10.61□□□□□ -0.71
SPNS1-203ENST00000334536 KRTAP10-6P60371 365 aaPredicted RBP10.6□□□□□ -0.71
SPNS1-203ENST00000334536 KRTAP17-1Q9BYP8 105 aa10.59□□□□□ -0.71
SPNS1-203ENST00000334536 LUZP6Q538Z0 58 aa10.58□□□□□ -0.72
SPNS1-203ENST00000334536 FAT3Q8TDW7 4589 aa10.55□□□□□ -0.72
SPNS1-203ENST00000334536 KRTAP13-4Q3LI77 160 aa10.54□□□□□ -0.72
SPNS1-203ENST00000334536 TNXBP22105 4242 aa10.51□□□□□ -0.73
SPNS1-203ENST00000334536 S4R3F8 94 aa10.51□□□□□ -0.73
SPNS1-203ENST00000334536 A0A0D9SG42 100 aa10.5□□□□□ -0.73
SPNS1-203ENST00000334536 XP32Q5T750 250 aa10.47□□□□□ -0.73
SPNS1-203ENST00000334536 LRP1Q07954 4544 aaKnown RBP10.45□□□□□ -0.74
SPNS1-203ENST00000334536 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
SPNS1-203ENST00000334536 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
SPNS1-203ENST00000334536 KRTAP12-2P59991 146 aa10.32□□□□□ -0.76
SPNS1-203ENST00000334536 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
SPNS1-203ENST00000334536 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
SPNS1-203ENST00000334536 KRTAP4-5Q9BYR2 181 aa10.29□□□□□ -0.76
SPNS1-203ENST00000334536 DMBT1Q9UGM3 2413 aaPredicted RBP10.26□□□□□ -0.77
SPNS1-203ENST00000334536 KRTAP12-1P59990 96 aa10.26□□□□□ -0.77
SPNS1-203ENST00000334536 BIRC6Q9NR09 4857 aa10.22□□□□□ -0.77
SPNS1-203ENST00000334536 PLAC4Q8WY50 150 aa10.14□□□□□ -0.79
SPNS1-203ENST00000334536 ABCA13Q86UQ4 5058 aa10.11□□□□□ -0.79
SPNS1-203ENST00000334536 HERC2O95714 4834 aa10.11□□□□□ -0.79
SPNS1-203ENST00000334536 M0QZ58 72 aa10.08□□□□□ -0.8
SPNS1-203ENST00000334536 SEC61BP60468 96 aaKnown RBP10.08□□□□□ -0.8
SPNS1-203ENST00000334536 J3QL48 77 aa9.92□□□□□ -0.82
SPNS1-203ENST00000334536 LRP2P98164 4655 aa9.79□□□□□ -0.84
SPNS1-203ENST00000334536 PP632Q6XCG6 107 aa9.78□□□□□ -0.84
SPNS1-203ENST00000334536 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
SPNS1-203ENST00000334536 LPAP08519 4548 aa9.73□□□□□ -0.85
SPNS1-203ENST00000334536 CAMK2N1Q7Z7J9 78 aa9.66□□□□□ -0.86
SPNS1-203ENST00000334536 HERC1Q15751 4861 aa9.55□□□□□ -0.88
SPNS1-203ENST00000334536 R4GN34 69 aa9.55□□□□□ -0.88
SPNS1-203ENST00000334536 KRTAP4-1Q9BYQ7 146 aa9.53□□□□□ -0.88
SPNS1-203ENST00000334536 MUC17Q685J3 4493 aa9.51□□□□□ -0.89
SPNS1-203ENST00000334536 SPRR5A0A1B0GTR4 108 aa9.43□□□□□ -0.9
SPNS1-203ENST00000334536 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
SPNS1-203ENST00000334536 PRO2289Q9P1D8 64 aa9.43□□□□□ -0.9
SPNS1-203ENST00000334536 HMCN2Q8NDA2 5059 aa9.41□□□□□ -0.9
SPNS1-203ENST00000334536 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
SPNS1-203ENST00000334536 KRTAP23-1A1A580 65 aa9.29□□□□□ -0.92
SPNS1-203ENST00000334536 INE1O15225 51 aa9.17□□□□□ -0.94
SPNS1-203ENST00000334536 MUC2Q02817 5179 aa9.12□□□□□ -0.95
SPNS1-203ENST00000334536 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
SPNS1-203ENST00000334536 UBR4Q5T4S7 5183 aa9.01□□□□□ -0.97
SPNS1-203ENST00000334536 TNP1P09430 55 aa8.97□□□□□ -0.97
SPNS1-203ENST00000334536 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
SPNS1-203ENST00000334536 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
SPNS1-203ENST00000334536 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
SPNS1-203ENST00000334536 SPRR2GQ9BYE4 73 aa8.74□□□□□ -1.01
SPNS1-203ENST00000334536 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
SPNS1-203ENST00000334536 MT1HP80294 61 aa8.62□□□□□ -1.03
SPNS1-203ENST00000334536 M0R2T5 61 aa8.61□□□□□ -1.03
SPNS1-203ENST00000334536 MT2AP02795 61 aa8.48□□□□□ -1.05
SPNS1-203ENST00000334536 KRTAP10-10P60014 251 aa8.46□□□□□ -1.06
SPNS1-203ENST00000334536 MT1FP04733 61 aa8.45□□□□□ -1.06
SPNS1-203ENST00000334536 KRTAP9-8Q9BYQ0 159 aa8.42□□□□□ -1.06
SPNS1-203ENST00000334536 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
SPNS1-203ENST00000334536 LCE3AQ5TA76 89 aa8.25□□□□□ -1.09
SPNS1-203ENST00000334536 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
SPNS1-203ENST00000334536 MT1BP07438 61 aa8.2□□□□□ -1.1
SPNS1-203ENST00000334536 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
SPNS1-203ENST00000334536 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
SPNS1-203ENST00000334536 MT1XP80297 61 aa8.12□□□□□ -1.11
SPNS1-203ENST00000334536 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
SPNS1-203ENST00000334536 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
SPNS1-203ENST00000334536 KRTAP12-3P60328 96 aa7.89□□□□□ -1.15
SPNS1-203ENST00000334536 KRTAP10-7P60409 375 aaPredicted RBP7.85□□□□□ -1.15
SPNS1-203ENST00000334536 LCE2BO14633 110 aa7.79□□□□□ -1.16
SPNS1-203ENST00000334536 USH2AO75445 5202 aa7.59□□□□□ -1.19
SPNS1-203ENST00000334536 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
SPNS1-203ENST00000334536 LCE3CQ5T5A8 94 aa7.48□□□□□ -1.21
SPNS1-203ENST00000334536 KRTAP2-3P0C7H8 128 aa7.46□□□□□ -1.22
SPNS1-203ENST00000334536 KRTAP2-4Q9BYR9 128 aa7.46□□□□□ -1.22
SPNS1-203ENST00000334536 KRTAP2-1Q9BYU5 128 aa7.46□□□□□ -1.22
SPNS1-203ENST00000334536 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.23
SPNS1-203ENST00000334536 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
SPNS1-203ENST00000334536 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
SPNS1-203ENST00000334536 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
SPNS1-203ENST00000334536 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
SPNS1-203ENST00000334536 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
SPNS1-203ENST00000334536 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
SPNS1-203ENST00000334536 KRTAP19-7Q3SYF9 63 aa7.23□□□□□ -1.25
SPNS1-203ENST00000334536 KRTAP9-6A8MVA2 160 aa7.16□□□□□ -1.26
SPNS1-203ENST00000334536 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
SPNS1-203ENST00000334536 KMT2DO14686 5537 aa7.08□□□□□ -1.28
SPNS1-203ENST00000334536 MT1EP04732 61 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms