RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 MRPL34Q9BQ48 92 aaKnown RBP5.88□□□□□ -1.47
AP1S3-201ENST00000334271 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
AP1S3-201ENST00000334271 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
AP1S3-201ENST00000334271 HSPG2P98160 4391 aa5.85□□□□□ -1.47
AP1S3-201ENST00000334271 RYR1P21817 5038 aa5.84□□□□□ -1.47
AP1S3-201ENST00000334271 KIAA1109Q2LD37 5005 aa5.82□□□□□ -1.48
AP1S3-201ENST00000334271 MT1HL1P0DM35 61 aa5.79□□□□□ -1.48
AP1S3-201ENST00000334271 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
AP1S3-201ENST00000334271 A0A1B0GU69 56 aa5.74□□□□□ -1.49
AP1S3-201ENST00000334271 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
AP1S3-201ENST00000334271 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.49
AP1S3-201ENST00000334271 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.49
AP1S3-201ENST00000334271 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.49
AP1S3-201ENST00000334271 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
AP1S3-201ENST00000334271 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
AP1S3-201ENST00000334271 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
AP1S3-201ENST00000334271 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
AP1S3-201ENST00000334271 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
AP1S3-201ENST00000334271 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
AP1S3-201ENST00000334271 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
AP1S3-201ENST00000334271 TNXBP22105 4242 aa5.65□□□□□ -1.5
AP1S3-201ENST00000334271 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.5
AP1S3-201ENST00000334271 R4GN34 69 aa5.64□□□□□ -1.51
AP1S3-201ENST00000334271 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
AP1S3-201ENST00000334271 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
AP1S3-201ENST00000334271 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
AP1S3-201ENST00000334271 RPL37P61927 97 aaKnown RBP5.6□□□□□ -1.51
AP1S3-201ENST00000334271 XP32Q5T750 250 aa5.6□□□□□ -1.51
AP1S3-201ENST00000334271 HRES1P13985 223 aa5.58□□□□□ -1.52
AP1S3-201ENST00000334271 ABCA13Q86UQ4 5058 aa5.57□□□□□ -1.52
AP1S3-201ENST00000334271 HERC2O95714 4834 aa5.56□□□□□ -1.52
AP1S3-201ENST00000334271 ACYP2P14621 99 aa5.54□□□□□ -1.52
AP1S3-201ENST00000334271 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
AP1S3-201ENST00000334271 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
AP1S3-201ENST00000334271 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
AP1S3-201ENST00000334271 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
AP1S3-201ENST00000334271 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
AP1S3-201ENST00000334271 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
AP1S3-201ENST00000334271 LCE2BO14633 110 aa5.38□□□□□ -1.55
AP1S3-201ENST00000334271 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
AP1S3-201ENST00000334271 LPAP08519 4548 aa5.34□□□□□ -1.56
AP1S3-201ENST00000334271 LRP2P98164 4655 aa5.29□□□□□ -1.56
AP1S3-201ENST00000334271 HERC1Q15751 4861 aa5.27□□□□□ -1.57
AP1S3-201ENST00000334271 H1FX-AS1Q4G0G2 97 aa5.27□□□□□ -1.57
AP1S3-201ENST00000334271 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
AP1S3-201ENST00000334271 INE1O15225 51 aa5.21□□□□□ -1.57
AP1S3-201ENST00000334271 PLAC4Q8WY50 150 aa5.21□□□□□ -1.57
AP1S3-201ENST00000334271 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
AP1S3-201ENST00000334271 S4R3F8 94 aa5.2□□□□□ -1.58
AP1S3-201ENST00000334271 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
AP1S3-201ENST00000334271 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
AP1S3-201ENST00000334271 H0YAA0 97 aa5.13□□□□□ -1.59
AP1S3-201ENST00000334271 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
AP1S3-201ENST00000334271 MUC2Q02817 5179 aa5.03□□□□□ -1.6
AP1S3-201ENST00000334271 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
AP1S3-201ENST00000334271 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.61
AP1S3-201ENST00000334271 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
AP1S3-201ENST00000334271 M0QZ58 72 aa4.93□□□□□ -1.62
AP1S3-201ENST00000334271 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
AP1S3-201ENST00000334271 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
AP1S3-201ENST00000334271 KRTAP4-8Q9BYQ9 185 aa4.88□□□□□ -1.63
AP1S3-201ENST00000334271 MT1HP80294 61 aa4.87□□□□□ -1.63
AP1S3-201ENST00000334271 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
AP1S3-201ENST00000334271 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
AP1S3-201ENST00000334271 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
AP1S3-201ENST00000334271 M0R2T5 61 aa4.8□□□□□ -1.64
AP1S3-201ENST00000334271 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
AP1S3-201ENST00000334271 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
AP1S3-201ENST00000334271 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
AP1S3-201ENST00000334271 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
AP1S3-201ENST00000334271 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
AP1S3-201ENST00000334271 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
AP1S3-201ENST00000334271 MT2AP02795 61 aa4.68□□□□□ -1.66
AP1S3-201ENST00000334271 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.66
AP1S3-201ENST00000334271 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
AP1S3-201ENST00000334271 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
AP1S3-201ENST00000334271 A0A0D9SG42 100 aa4.63□□□□□ -1.67
AP1S3-201ENST00000334271 MT1FP04733 61 aa4.62□□□□□ -1.67
AP1S3-201ENST00000334271 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
AP1S3-201ENST00000334271 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
AP1S3-201ENST00000334271 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
AP1S3-201ENST00000334271 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
AP1S3-201ENST00000334271 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
AP1S3-201ENST00000334271 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
AP1S3-201ENST00000334271 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
AP1S3-201ENST00000334271 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
AP1S3-201ENST00000334271 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
AP1S3-201ENST00000334271 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
AP1S3-201ENST00000334271 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
AP1S3-201ENST00000334271 MT1BP07438 61 aa4.41□□□□□ -1.7
AP1S3-201ENST00000334271 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
AP1S3-201ENST00000334271 TNP1P09430 55 aa4.33□□□□□ -1.72
AP1S3-201ENST00000334271 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
AP1S3-201ENST00000334271 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
AP1S3-201ENST00000334271 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
AP1S3-201ENST00000334271 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
AP1S3-201ENST00000334271 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
AP1S3-201ENST00000334271 MT1XP80297 61 aa4.27□□□□□ -1.73
AP1S3-201ENST00000334271 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
AP1S3-201ENST00000334271 USH2AO75445 5202 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms