RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 H0YAA0 97 aa6.28□□□□□ -1.4
HDAC6-201ENST00000334136 KIAA1109Q2LD37 5005 aa6.27□□□□□ -1.41
HDAC6-201ENST00000334136 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
HDAC6-201ENST00000334136 KMT2CQ8NEZ4 4911 aaKnown RBP6.26□□□□□ -1.41
HDAC6-201ENST00000334136 FAT1Q14517 4588 aa6.25□□□□□ -1.41
HDAC6-201ENST00000334136 M0QZ58 72 aa6.25□□□□□ -1.41
HDAC6-201ENST00000334136 HYDINQ4G0P3 5121 aa6.25□□□□□ -1.41
HDAC6-201ENST00000334136 RYR3Q15413 4870 aa6.25□□□□□ -1.41
HDAC6-201ENST00000334136 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
HDAC6-201ENST00000334136 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
HDAC6-201ENST00000334136 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
HDAC6-201ENST00000334136 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
HDAC6-201ENST00000334136 FAT2Q9NYQ8 4349 aa6.19□□□□□ -1.42
HDAC6-201ENST00000334136 RYR1P21817 5038 aa6.14□□□□□ -1.43
HDAC6-201ENST00000334136 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
HDAC6-201ENST00000334136 APOBP04114 4563 aaKnown RBP6.08□□□□□ -1.44
HDAC6-201ENST00000334136 BIRC6Q9NR09 4857 aa6.07□□□□□ -1.44
HDAC6-201ENST00000334136 FRAS1Q86XX4 4008 aa6.07□□□□□ -1.44
HDAC6-201ENST00000334136 PKHD1P08F94 4074 aa6.05□□□□□ -1.44
HDAC6-201ENST00000334136 HECTD4Q9Y4D8 3996 aa6.05□□□□□ -1.44
HDAC6-201ENST00000334136 P0C880 135 aa6.01□□□□□ -1.45
HDAC6-201ENST00000334136 DNAH8Q96JB1 4490 aa6□□□□□ -1.45
HDAC6-201ENST00000334136 VPS13BQ7Z7G8 4022 aa6□□□□□ -1.45
HDAC6-201ENST00000334136 PKD1P98161 4303 aa5.98□□□□□ -1.45
HDAC6-201ENST00000334136 EPPK1P58107 5090 aaKnown RBP5.96□□□□□ -1.46
HDAC6-201ENST00000334136 HERC2O95714 4834 aa5.95□□□□□ -1.46
HDAC6-201ENST00000334136 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
HDAC6-201ENST00000334136 HSPG2P98160 4391 aa5.92□□□□□ -1.46
HDAC6-201ENST00000334136 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
HDAC6-201ENST00000334136 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
HDAC6-201ENST00000334136 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
HDAC6-201ENST00000334136 MYCBP2O75592 4640 aa5.82□□□□□ -1.48
HDAC6-201ENST00000334136 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
HDAC6-201ENST00000334136 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-201ENST00000334136 TNP1P09430 55 aa5.72□□□□□ -1.49
HDAC6-201ENST00000334136 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
HDAC6-201ENST00000334136 FAT3Q8TDW7 4589 aa5.72□□□□□ -1.49
HDAC6-201ENST00000334136 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.49
HDAC6-201ENST00000334136 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
HDAC6-201ENST00000334136 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
HDAC6-201ENST00000334136 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
HDAC6-201ENST00000334136 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
HDAC6-201ENST00000334136 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
HDAC6-201ENST00000334136 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
HDAC6-201ENST00000334136 LRP2P98164 4655 aa5.54□□□□□ -1.52
HDAC6-201ENST00000334136 HERC1Q15751 4861 aa5.5□□□□□ -1.53
HDAC6-201ENST00000334136 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
HDAC6-201ENST00000334136 TNXBP22105 4242 aa5.47□□□□□ -1.53
HDAC6-201ENST00000334136 PKHD1L1Q86WI1 4243 aa5.46□□□□□ -1.54
HDAC6-201ENST00000334136 MT1HP80294 61 aa5.4□□□□□ -1.55
HDAC6-201ENST00000334136 LPAP08519 4548 aa5.39□□□□□ -1.55
HDAC6-201ENST00000334136 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
HDAC6-201ENST00000334136 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
HDAC6-201ENST00000334136 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
HDAC6-201ENST00000334136 MT2AP02795 61 aa5.2□□□□□ -1.58
HDAC6-201ENST00000334136 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
HDAC6-201ENST00000334136 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
HDAC6-201ENST00000334136 UBR4Q5T4S7 5183 aa5.17□□□□□ -1.58
HDAC6-201ENST00000334136 MT1FP04733 61 aa5.13□□□□□ -1.59
HDAC6-201ENST00000334136 KRTAP19-2Q3LHN2 52 aa5.13□□□□□ -1.59
HDAC6-201ENST00000334136 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
HDAC6-201ENST00000334136 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
HDAC6-201ENST00000334136 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
HDAC6-201ENST00000334136 MUC2Q02817 5179 aa5□□□□□ -1.61
HDAC6-201ENST00000334136 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
HDAC6-201ENST00000334136 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
HDAC6-201ENST00000334136 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
HDAC6-201ENST00000334136 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.62
HDAC6-201ENST00000334136 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
HDAC6-201ENST00000334136 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
HDAC6-201ENST00000334136 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
HDAC6-201ENST00000334136 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
HDAC6-201ENST00000334136 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
HDAC6-201ENST00000334136 INE1O15225 51 aa4.81□□□□□ -1.64
HDAC6-201ENST00000334136 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
HDAC6-201ENST00000334136 MT1BP07438 61 aa4.75□□□□□ -1.65
HDAC6-201ENST00000334136 LCE2BO14633 110 aa4.74□□□□□ -1.65
HDAC6-201ENST00000334136 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
HDAC6-201ENST00000334136 FSIP2Q5CZC0 6907 aa4.73□□□□□ -1.65
HDAC6-201ENST00000334136 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
HDAC6-201ENST00000334136 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
HDAC6-201ENST00000334136 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
HDAC6-201ENST00000334136 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
HDAC6-201ENST00000334136 MT1XP80297 61 aa4.6□□□□□ -1.67
HDAC6-201ENST00000334136 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
HDAC6-201ENST00000334136 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-201ENST00000334136 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
HDAC6-201ENST00000334136 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
HDAC6-201ENST00000334136 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
HDAC6-201ENST00000334136 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
HDAC6-201ENST00000334136 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
HDAC6-201ENST00000334136 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
HDAC6-201ENST00000334136 USH2AO75445 5202 aa4.37□□□□□ -1.71
HDAC6-201ENST00000334136 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
HDAC6-201ENST00000334136 SPRR2EP22531 72 aa4.27□□□□□ -1.73
HDAC6-201ENST00000334136 SPRR2BP35325 72 aa4.27□□□□□ -1.73
HDAC6-201ENST00000334136 SPRR2AP35326 72 aa4.27□□□□□ -1.73
HDAC6-201ENST00000334136 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
HDAC6-201ENST00000334136 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
HDAC6-201ENST00000334136 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms