RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
C12orf56-201ENST00000333722 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
C12orf56-201ENST00000333722 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
C12orf56-201ENST00000333722 RYR1P21817 5038 aa6.8□□□□□ -1.32
C12orf56-201ENST00000333722 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
C12orf56-201ENST00000333722 RYR3Q15413 4870 aa6.8□□□□□ -1.32
C12orf56-201ENST00000333722 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
C12orf56-201ENST00000333722 A6NN06 94 aa6.78□□□□□ -1.32
C12orf56-201ENST00000333722 RYR2Q92736 4967 aa6.74□□□□□ -1.33
C12orf56-201ENST00000333722 PKD1P98161 4303 aa6.74□□□□□ -1.33
C12orf56-201ENST00000333722 MT1HL1P0DM35 61 aa6.71□□□□□ -1.34
C12orf56-201ENST00000333722 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.34
C12orf56-201ENST00000333722 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
C12orf56-201ENST00000333722 H0YAA0 97 aa6.69□□□□□ -1.34
C12orf56-201ENST00000333722 P0C880 135 aa6.64□□□□□ -1.35
C12orf56-201ENST00000333722 R4GN34 69 aa6.62□□□□□ -1.35
C12orf56-201ENST00000333722 M0QZ58 72 aa6.61□□□□□ -1.35
C12orf56-201ENST00000333722 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
C12orf56-201ENST00000333722 M0R2T5 61 aa6.58□□□□□ -1.36
C12orf56-201ENST00000333722 HSPG2P98160 4391 aa6.5□□□□□ -1.37
C12orf56-201ENST00000333722 EPPK1P58107 5090 aaKnown RBP6.49□□□□□ -1.37
C12orf56-201ENST00000333722 LRP2P98164 4655 aa6.48□□□□□ -1.37
C12orf56-201ENST00000333722 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.37
C12orf56-201ENST00000333722 ROMO1P60602 79 aa6.46□□□□□ -1.38
C12orf56-201ENST00000333722 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
C12orf56-201ENST00000333722 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
C12orf56-201ENST00000333722 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
C12orf56-201ENST00000333722 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
C12orf56-201ENST00000333722 LPAP08519 4548 aa6.37□□□□□ -1.39
C12orf56-201ENST00000333722 HERC2O95714 4834 aa6.36□□□□□ -1.39
C12orf56-201ENST00000333722 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
C12orf56-201ENST00000333722 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
C12orf56-201ENST00000333722 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
C12orf56-201ENST00000333722 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
C12orf56-201ENST00000333722 H3BS24 57 aa6.27□□□□□ -1.41
C12orf56-201ENST00000333722 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
C12orf56-201ENST00000333722 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
C12orf56-201ENST00000333722 TNXBP22105 4242 aa6.23□□□□□ -1.41
C12orf56-201ENST00000333722 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
C12orf56-201ENST00000333722 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
C12orf56-201ENST00000333722 MUC2Q02817 5179 aa6.15□□□□□ -1.42
C12orf56-201ENST00000333722 HERC1Q15751 4861 aa6.07□□□□□ -1.44
C12orf56-201ENST00000333722 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
C12orf56-201ENST00000333722 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
C12orf56-201ENST00000333722 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
C12orf56-201ENST00000333722 RNF213Q63HN8 5207 aa5.96□□□□□ -1.46
C12orf56-201ENST00000333722 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.46
C12orf56-201ENST00000333722 TNP1P09430 55 aa5.89□□□□□ -1.47
C12orf56-201ENST00000333722 NDUFAF8A1L188 74 aa5.89□□□□□ -1.47
C12orf56-201ENST00000333722 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
C12orf56-201ENST00000333722 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
C12orf56-201ENST00000333722 UBR4Q5T4S7 5183 aa5.81□□□□□ -1.48
C12orf56-201ENST00000333722 MT1HP80294 61 aa5.68□□□□□ -1.5
C12orf56-201ENST00000333722 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
C12orf56-201ENST00000333722 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
C12orf56-201ENST00000333722 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
C12orf56-201ENST00000333722 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
C12orf56-201ENST00000333722 MT1FP04733 61 aa5.59□□□□□ -1.52
C12orf56-201ENST00000333722 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
C12orf56-201ENST00000333722 MT2AP02795 61 aa5.57□□□□□ -1.52
C12orf56-201ENST00000333722 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
C12orf56-201ENST00000333722 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
C12orf56-201ENST00000333722 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
C12orf56-201ENST00000333722 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
C12orf56-201ENST00000333722 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
C12orf56-201ENST00000333722 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
C12orf56-201ENST00000333722 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
C12orf56-201ENST00000333722 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
C12orf56-201ENST00000333722 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
C12orf56-201ENST00000333722 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
C12orf56-201ENST00000333722 USH2AO75445 5202 aa5.27□□□□□ -1.57
C12orf56-201ENST00000333722 MT1BP07438 61 aa5.22□□□□□ -1.57
C12orf56-201ENST00000333722 KRTAP12-3P60328 96 aa5.21□□□□□ -1.57
C12orf56-201ENST00000333722 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
C12orf56-201ENST00000333722 MT1XP80297 61 aa5.16□□□□□ -1.58
C12orf56-201ENST00000333722 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
C12orf56-201ENST00000333722 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
C12orf56-201ENST00000333722 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
C12orf56-201ENST00000333722 LCE2BO14633 110 aa5.09□□□□□ -1.6
C12orf56-201ENST00000333722 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
C12orf56-201ENST00000333722 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
C12orf56-201ENST00000333722 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
C12orf56-201ENST00000333722 KMT2DO14686 5537 aa5.05□□□□□ -1.6
C12orf56-201ENST00000333722 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
C12orf56-201ENST00000333722 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
C12orf56-201ENST00000333722 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
C12orf56-201ENST00000333722 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
C12orf56-201ENST00000333722 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
C12orf56-201ENST00000333722 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
C12orf56-201ENST00000333722 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
C12orf56-201ENST00000333722 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
C12orf56-201ENST00000333722 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
C12orf56-201ENST00000333722 SSPOA2VEC9 5147 aa4.65□□□□□ -1.67
C12orf56-201ENST00000333722 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
C12orf56-201ENST00000333722 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.67
C12orf56-201ENST00000333722 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
C12orf56-201ENST00000333722 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
C12orf56-201ENST00000333722 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
C12orf56-201ENST00000333722 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
C12orf56-201ENST00000333722 MT1GP13640 62 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms