RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 A0A1B0GU33 70 aa10.59□□□□□ -0.71
LINC01006-201ENST00000333319 MT1HL1P0DM35 61 aa10.59□□□□□ -0.71
LINC01006-201ENST00000333319 H0YAA0 97 aa10.59□□□□□ -0.71
LINC01006-201ENST00000333319 RBM12B-AS1Q9P1G2 102 aa10.59□□□□□ -0.71
LINC01006-201ENST00000333319 H1FX-AS1Q4G0G2 97 aa10.55□□□□□ -0.72
LINC01006-201ENST00000333319 ADM2Q7Z4H4 148 aa10.52□□□□□ -0.73
LINC01006-201ENST00000333319 PRAC1Q96KF2 57 aa10.51□□□□□ -0.73
LINC01006-201ENST00000333319 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.73
LINC01006-201ENST00000333319 EPPK1P58107 5090 aaKnown RBP10.45□□□□□ -0.74
LINC01006-201ENST00000333319 S4R3F8 94 aa10.4□□□□□ -0.75
LINC01006-201ENST00000333319 LPAP08519 4548 aa10.34□□□□□ -0.75
LINC01006-201ENST00000333319 LRP2P98164 4655 aa10.33□□□□□ -0.76
LINC01006-201ENST00000333319 KRTAP10-6P60371 365 aaPredicted RBP10.33□□□□□ -0.76
LINC01006-201ENST00000333319 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
LINC01006-201ENST00000333319 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
LINC01006-201ENST00000333319 CSAG1Q6PB30 78 aa10.23□□□□□ -0.77
LINC01006-201ENST00000333319 KRTAP4-5Q9BYR2 181 aa10.23□□□□□ -0.77
LINC01006-201ENST00000333319 ABCA13Q86UQ4 5058 aa10.23□□□□□ -0.77
LINC01006-201ENST00000333319 KRTAP13-4Q3LI77 160 aa10.2□□□□□ -0.78
LINC01006-201ENST00000333319 K7ERS5 55 aa10.19□□□□□ -0.78
LINC01006-201ENST00000333319 P0C880 135 aa10.16□□□□□ -0.78
LINC01006-201ENST00000333319 A0A0D9SG42 100 aa10.12□□□□□ -0.79
LINC01006-201ENST00000333319 LINC01554Q52M75 96 aa10.09□□□□□ -0.79
LINC01006-201ENST00000333319 KRTAP25-1Q3LHN0 102 aa9.97□□□□□ -0.81
LINC01006-201ENST00000333319 BIRC6Q9NR09 4857 aa9.97□□□□□ -0.81
LINC01006-201ENST00000333319 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
LINC01006-201ENST00000333319 ROMO1P60602 79 aa9.94□□□□□ -0.82
LINC01006-201ENST00000333319 J3QL48 77 aa9.92□□□□□ -0.82
LINC01006-201ENST00000333319 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
LINC01006-201ENST00000333319 MUC17Q685J3 4493 aa9.89□□□□□ -0.83
LINC01006-201ENST00000333319 HERC2O95714 4834 aa9.88□□□□□ -0.83
LINC01006-201ENST00000333319 KRTAP12-2P59991 146 aa9.86□□□□□ -0.83
LINC01006-201ENST00000333319 M0QZ58 72 aa9.82□□□□□ -0.84
LINC01006-201ENST00000333319 KRTAP4-1Q9BYQ7 146 aa9.82□□□□□ -0.84
LINC01006-201ENST00000333319 KRTAP12-1P59990 96 aa9.8□□□□□ -0.84
LINC01006-201ENST00000333319 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
LINC01006-201ENST00000333319 R4GN34 69 aa9.65□□□□□ -0.87
LINC01006-201ENST00000333319 KRTAP19-2Q3LHN2 52 aa9.61□□□□□ -0.87
LINC01006-201ENST00000333319 C10orf95Q9H7T3 257 aa9.59□□□□□ -0.87
LINC01006-201ENST00000333319 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
LINC01006-201ENST00000333319 MUC2Q02817 5179 aa9.54□□□□□ -0.88
LINC01006-201ENST00000333319 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
LINC01006-201ENST00000333319 HERC1Q15751 4861 aa9.41□□□□□ -0.9
LINC01006-201ENST00000333319 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.9
LINC01006-201ENST00000333319 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
LINC01006-201ENST00000333319 CAMK2N1Q7Z7J9 78 aa9.14□□□□□ -0.95
LINC01006-201ENST00000333319 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
LINC01006-201ENST00000333319 FAT4Q6V0I7 4981 aa9.08□□□□□ -0.96
LINC01006-201ENST00000333319 KRTAP15-1Q3LI76 137 aa9.04□□□□□ -0.96
LINC01006-201ENST00000333319 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
LINC01006-201ENST00000333319 H3BS24 57 aa8.92□□□□□ -0.98
LINC01006-201ENST00000333319 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
LINC01006-201ENST00000333319 M0R2T5 61 aa8.91□□□□□ -0.98
LINC01006-201ENST00000333319 MT1HP80294 61 aa8.87□□□□□ -0.99
LINC01006-201ENST00000333319 PP632Q6XCG6 107 aa8.84□□□□□ -0.99
LINC01006-201ENST00000333319 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
LINC01006-201ENST00000333319 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
LINC01006-201ENST00000333319 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
LINC01006-201ENST00000333319 TNP1P09430 55 aa8.77□□□□□ -1.01
LINC01006-201ENST00000333319 NDUFAF8A1L188 74 aa8.75□□□□□ -1.01
LINC01006-201ENST00000333319 MT2AP02795 61 aa8.69□□□□□ -1.02
LINC01006-201ENST00000333319 MT1FP04733 61 aa8.69□□□□□ -1.02
LINC01006-201ENST00000333319 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
LINC01006-201ENST00000333319 KRTAP9-8Q9BYQ0 159 aa8.65□□□□□ -1.03
LINC01006-201ENST00000333319 KRTAP23-1A1A580 65 aa8.59□□□□□ -1.03
LINC01006-201ENST00000333319 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
LINC01006-201ENST00000333319 MT1BP07438 61 aa8.37□□□□□ -1.07
LINC01006-201ENST00000333319 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
LINC01006-201ENST00000333319 LUZP6Q538Z0 58 aa8.31□□□□□ -1.08
LINC01006-201ENST00000333319 KRTAP9-3Q9BYQ3 159 aa8.29□□□□□ -1.08
LINC01006-201ENST00000333319 KRTAP10-5P60370 271 aa8.28□□□□□ -1.08
LINC01006-201ENST00000333319 MT1XP80297 61 aa8.27□□□□□ -1.09
LINC01006-201ENST00000333319 SPRR5A0A1B0GTR4 108 aa8.18□□□□□ -1.1
LINC01006-201ENST00000333319 KRTAP8-1Q8IUC2 63 aa8.11□□□□□ -1.11
LINC01006-201ENST00000333319 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
LINC01006-201ENST00000333319 KRTAP10-7P60409 375 aaPredicted RBP8.03□□□□□ -1.12
LINC01006-201ENST00000333319 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
LINC01006-201ENST00000333319 PRO2289Q9P1D8 64 aa8□□□□□ -1.13
LINC01006-201ENST00000333319 LCE2BO14633 110 aa7.99□□□□□ -1.13
LINC01006-201ENST00000333319 KRTAP12-3P60328 96 aa7.94□□□□□ -1.14
LINC01006-201ENST00000333319 USH2AO75445 5202 aa7.87□□□□□ -1.15
LINC01006-201ENST00000333319 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
LINC01006-201ENST00000333319 KRTAP19-5Q3LI72 72 aa7.67□□□□□ -1.18
LINC01006-201ENST00000333319 KMT2DO14686 5537 aa7.66□□□□□ -1.18
LINC01006-201ENST00000333319 KRTAP4-8A0A0G2JLE6 195 aa7.58□□□□□ -1.2
LINC01006-201ENST00000333319 KRTAP4-8Q9BYQ9 185 aa7.58□□□□□ -1.2
LINC01006-201ENST00000333319 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
LINC01006-201ENST00000333319 LCE3CQ5T5A8 94 aa7.47□□□□□ -1.21
LINC01006-201ENST00000333319 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
LINC01006-201ENST00000333319 KRTAP19-7Q3SYF9 63 aa7.37□□□□□ -1.23
LINC01006-201ENST00000333319 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
LINC01006-201ENST00000333319 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
LINC01006-201ENST00000333319 KRTAP9-6A8MVA2 160 aa7.18□□□□□ -1.26
LINC01006-201ENST00000333319 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
LINC01006-201ENST00000333319 MT1EP04732 61 aa7.16□□□□□ -1.26
LINC01006-201ENST00000333319 MT1LQ93083 61 aa7.14□□□□□ -1.27
LINC01006-201ENST00000333319 KRTAP19-4Q3LI73 84 aa7.09□□□□□ -1.27
LINC01006-201ENST00000333319 INE1O15225 51 aa7.04□□□□□ -1.28
LINC01006-201ENST00000333319 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
LINC01006-201ENST00000333319 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms