RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
SRPRA-201ENST00000332118 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
SRPRA-201ENST00000332118 A0A1B0GU69 56 aa7.12□□□□□ -1.27
SRPRA-201ENST00000332118 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
SRPRA-201ENST00000332118 H3BS24 57 aa7.03□□□□□ -1.28
SRPRA-201ENST00000332118 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
SRPRA-201ENST00000332118 HERC2O95714 4834 aa6.99□□□□□ -1.29
SRPRA-201ENST00000332118 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
SRPRA-201ENST00000332118 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
SRPRA-201ENST00000332118 ABCA13Q86UQ4 5058 aa6.95□□□□□ -1.3
SRPRA-201ENST00000332118 BIRC6Q9NR09 4857 aa6.95□□□□□ -1.3
SRPRA-201ENST00000332118 MUC17Q685J3 4493 aa6.94□□□□□ -1.3
SRPRA-201ENST00000332118 UQCR11O14957 56 aa6.94□□□□□ -1.3
SRPRA-201ENST00000332118 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
SRPRA-201ENST00000332118 LPAP08519 4548 aa6.91□□□□□ -1.3
SRPRA-201ENST00000332118 LRP2P98164 4655 aa6.89□□□□□ -1.31
SRPRA-201ENST00000332118 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
SRPRA-201ENST00000332118 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
SRPRA-201ENST00000332118 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
SRPRA-201ENST00000332118 S4R3F8 94 aa6.83□□□□□ -1.32
SRPRA-201ENST00000332118 H0YAA0 97 aa6.8□□□□□ -1.32
SRPRA-201ENST00000332118 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
SRPRA-201ENST00000332118 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
SRPRA-201ENST00000332118 A0A1B0GU33 70 aa6.78□□□□□ -1.32
SRPRA-201ENST00000332118 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
SRPRA-201ENST00000332118 J3QL48 77 aa6.73□□□□□ -1.33
SRPRA-201ENST00000332118 KRTAP19-2Q3LHN2 52 aa6.7□□□□□ -1.34
SRPRA-201ENST00000332118 A0A0D9SG42 100 aa6.68□□□□□ -1.34
SRPRA-201ENST00000332118 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
SRPRA-201ENST00000332118 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
SRPRA-201ENST00000332118 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
SRPRA-201ENST00000332118 P0C880 135 aa6.58□□□□□ -1.36
SRPRA-201ENST00000332118 PCLOQ9Y6V0 5065 aa6.57□□□□□ -1.36
SRPRA-201ENST00000332118 M0QZ58 72 aa6.51□□□□□ -1.37
SRPRA-201ENST00000332118 HERC1Q15751 4861 aa6.5□□□□□ -1.37
SRPRA-201ENST00000332118 ROMO1P60602 79 aa6.49□□□□□ -1.37
SRPRA-201ENST00000332118 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.37
SRPRA-201ENST00000332118 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
SRPRA-201ENST00000332118 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
SRPRA-201ENST00000332118 K7ERS5 55 aa6.44□□□□□ -1.38
SRPRA-201ENST00000332118 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
SRPRA-201ENST00000332118 MUC2Q02817 5179 aa6.38□□□□□ -1.39
SRPRA-201ENST00000332118 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
SRPRA-201ENST00000332118 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
SRPRA-201ENST00000332118 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
SRPRA-201ENST00000332118 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
SRPRA-201ENST00000332118 R4GN34 69 aa6.25□□□□□ -1.41
SRPRA-201ENST00000332118 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
SRPRA-201ENST00000332118 MT1HP80294 61 aa6.14□□□□□ -1.43
SRPRA-201ENST00000332118 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
SRPRA-201ENST00000332118 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
SRPRA-201ENST00000332118 UBR4Q5T4S7 5183 aa6.07□□□□□ -1.44
SRPRA-201ENST00000332118 FAT4Q6V0I7 4981 aa6.03□□□□□ -1.44
SRPRA-201ENST00000332118 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
SRPRA-201ENST00000332118 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
SRPRA-201ENST00000332118 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
SRPRA-201ENST00000332118 MT2AP02795 61 aa5.97□□□□□ -1.45
SRPRA-201ENST00000332118 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
SRPRA-201ENST00000332118 MT1FP04733 61 aa5.93□□□□□ -1.46
SRPRA-201ENST00000332118 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
SRPRA-201ENST00000332118 M0R2T5 61 aa5.86□□□□□ -1.47
SRPRA-201ENST00000332118 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
SRPRA-201ENST00000332118 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
SRPRA-201ENST00000332118 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
SRPRA-201ENST00000332118 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
SRPRA-201ENST00000332118 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
SRPRA-201ENST00000332118 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
SRPRA-201ENST00000332118 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
SRPRA-201ENST00000332118 MT1BP07438 61 aa5.73□□□□□ -1.49
SRPRA-201ENST00000332118 LUZP6Q538Z0 58 aa5.71□□□□□ -1.5
SRPRA-201ENST00000332118 TNP1P09430 55 aa5.7□□□□□ -1.5
SRPRA-201ENST00000332118 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
SRPRA-201ENST00000332118 MT1XP80297 61 aa5.61□□□□□ -1.51
SRPRA-201ENST00000332118 LCE2BO14633 110 aa5.52□□□□□ -1.53
SRPRA-201ENST00000332118 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
SRPRA-201ENST00000332118 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
SRPRA-201ENST00000332118 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
SRPRA-201ENST00000332118 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.55
SRPRA-201ENST00000332118 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
SRPRA-201ENST00000332118 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
SRPRA-201ENST00000332118 USH2AO75445 5202 aa5.37□□□□□ -1.55
SRPRA-201ENST00000332118 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
SRPRA-201ENST00000332118 KMT2DO14686 5537 aa5.29□□□□□ -1.56
SRPRA-201ENST00000332118 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
SRPRA-201ENST00000332118 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
SRPRA-201ENST00000332118 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
SRPRA-201ENST00000332118 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
SRPRA-201ENST00000332118 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
SRPRA-201ENST00000332118 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
SRPRA-201ENST00000332118 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
SRPRA-201ENST00000332118 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
SRPRA-201ENST00000332118 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
SRPRA-201ENST00000332118 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
SRPRA-201ENST00000332118 MT1EP04732 61 aa4.9□□□□□ -1.63
SRPRA-201ENST00000332118 MT1LQ93083 61 aa4.84□□□□□ -1.63
SRPRA-201ENST00000332118 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
SRPRA-201ENST00000332118 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
SRPRA-201ENST00000332118 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
SRPRA-201ENST00000332118 INE1O15225 51 aa4.69□□□□□ -1.66
SRPRA-201ENST00000332118 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms