RNA–Protein interactions for RNA: ENST00000330722.6

KRT6A-201, Transcript of keratin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT6A, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-201ENST00000330722 COX6B2Q6YFQ2 88 aa9.59□□□□□ -0.87
KRT6A-201ENST00000330722 H0YAA0 97 aa9.58□□□□□ -0.88
KRT6A-201ENST00000330722 XP32Q5T750 250 aa9.5□□□□□ -0.89
KRT6A-201ENST00000330722 LPAP08519 4548 aa9.49□□□□□ -0.89
KRT6A-201ENST00000330722 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
KRT6A-201ENST00000330722 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
KRT6A-201ENST00000330722 A0A1B0GU33 70 aa9.48□□□□□ -0.89
KRT6A-201ENST00000330722 H1FX-AS1Q4G0G2 97 aa9.46□□□□□ -0.9
KRT6A-201ENST00000330722 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
KRT6A-201ENST00000330722 KRTAP3-3Q9BYR6 98 aa9.44□□□□□ -0.9
KRT6A-201ENST00000330722 LRP2P98164 4655 aa9.39□□□□□ -0.91
KRT6A-201ENST00000330722 ABCA13Q86UQ4 5058 aa9.34□□□□□ -0.91
KRT6A-201ENST00000330722 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
KRT6A-201ENST00000330722 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
KRT6A-201ENST00000330722 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
KRT6A-201ENST00000330722 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
KRT6A-201ENST00000330722 S4R3F8 94 aa9.25□□□□□ -0.93
KRT6A-201ENST00000330722 KRTAP4-5Q9BYR2 181 aa9.18□□□□□ -0.94
KRT6A-201ENST00000330722 P0C880 135 aa9.17□□□□□ -0.94
KRT6A-201ENST00000330722 LINC01554Q52M75 96 aa9.14□□□□□ -0.95
KRT6A-201ENST00000330722 A0A0D9SG42 100 aa9.13□□□□□ -0.95
KRT6A-201ENST00000330722 TPRXLQ17RH7 258 aa9.1□□□□□ -0.95
KRT6A-201ENST00000330722 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
KRT6A-201ENST00000330722 K7ERS5 55 aa9.02□□□□□ -0.97
KRT6A-201ENST00000330722 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
KRT6A-201ENST00000330722 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
KRT6A-201ENST00000330722 KRTAP12-2P59991 146 aa8.92□□□□□ -0.98
KRT6A-201ENST00000330722 ROMO1P60602 79 aa8.91□□□□□ -0.98
KRT6A-201ENST00000330722 HERC2O95714 4834 aa8.9□□□□□ -0.98
KRT6A-201ENST00000330722 KRTAP4-1Q9BYQ7 146 aa8.85□□□□□ -0.99
KRT6A-201ENST00000330722 KRTAP12-1P59990 96 aa8.82□□□□□ -1
KRT6A-201ENST00000330722 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
KRT6A-201ENST00000330722 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
KRT6A-201ENST00000330722 MUC2Q02817 5179 aa8.74□□□□□ -1.01
KRT6A-201ENST00000330722 BIRC6Q9NR09 4857 aa8.74□□□□□ -1.01
KRT6A-201ENST00000330722 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
KRT6A-201ENST00000330722 M0QZ58 72 aa8.71□□□□□ -1.02
KRT6A-201ENST00000330722 J3QL48 77 aa8.69□□□□□ -1.02
KRT6A-201ENST00000330722 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
KRT6A-201ENST00000330722 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
KRT6A-201ENST00000330722 R4GN34 69 aa8.57□□□□□ -1.04
KRT6A-201ENST00000330722 HERC1Q15751 4861 aa8.55□□□□□ -1.04
KRT6A-201ENST00000330722 PCLOQ9Y6V0 5065 aa8.49□□□□□ -1.05
KRT6A-201ENST00000330722 FLGP20930 4061 aaPredicted RBP8.46□□□□□ -1.05
KRT6A-201ENST00000330722 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
KRT6A-201ENST00000330722 H3BS24 57 aa8.33□□□□□ -1.08
KRT6A-201ENST00000330722 FAT4Q6V0I7 4981 aa8.33□□□□□ -1.08
KRT6A-201ENST00000330722 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
KRT6A-201ENST00000330722 RNF213Q63HN8 5207 aa8.15□□□□□ -1.1
KRT6A-201ENST00000330722 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
KRT6A-201ENST00000330722 UBR4Q5T4S7 5183 aa8.13□□□□□ -1.11
KRT6A-201ENST00000330722 CAMK2N1Q7Z7J9 78 aa8.12□□□□□ -1.11
KRT6A-201ENST00000330722 NDUFAF8A1L188 74 aa7.98□□□□□ -1.13
KRT6A-201ENST00000330722 MT1HP80294 61 aa7.9□□□□□ -1.15
KRT6A-201ENST00000330722 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.15
KRT6A-201ENST00000330722 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
KRT6A-201ENST00000330722 M0R2T5 61 aa7.86□□□□□ -1.15
KRT6A-201ENST00000330722 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
KRT6A-201ENST00000330722 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
KRT6A-201ENST00000330722 MT1FP04733 61 aa7.79□□□□□ -1.16
KRT6A-201ENST00000330722 TNP1P09430 55 aa7.78□□□□□ -1.16
KRT6A-201ENST00000330722 MT2AP02795 61 aa7.76□□□□□ -1.17
KRT6A-201ENST00000330722 KRTAP9-8Q9BYQ0 159 aa7.73□□□□□ -1.17
KRT6A-201ENST00000330722 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
KRT6A-201ENST00000330722 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
KRT6A-201ENST00000330722 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
KRT6A-201ENST00000330722 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
KRT6A-201ENST00000330722 MT1BP07438 61 aa7.5□□□□□ -1.21
KRT6A-201ENST00000330722 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
KRT6A-201ENST00000330722 MT1XP80297 61 aa7.42□□□□□ -1.22
KRT6A-201ENST00000330722 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
KRT6A-201ENST00000330722 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
KRT6A-201ENST00000330722 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
KRT6A-201ENST00000330722 USH2AO75445 5202 aa7.26□□□□□ -1.25
KRT6A-201ENST00000330722 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
KRT6A-201ENST00000330722 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
KRT6A-201ENST00000330722 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
KRT6A-201ENST00000330722 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
KRT6A-201ENST00000330722 LCE2BO14633 110 aa7.16□□□□□ -1.26
KRT6A-201ENST00000330722 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
KRT6A-201ENST00000330722 KMT2DO14686 5537 aa7.1□□□□□ -1.27
KRT6A-201ENST00000330722 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
KRT6A-201ENST00000330722 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
KRT6A-201ENST00000330722 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
KRT6A-201ENST00000330722 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
KRT6A-201ENST00000330722 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
KRT6A-201ENST00000330722 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
KRT6A-201ENST00000330722 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
KRT6A-201ENST00000330722 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
KRT6A-201ENST00000330722 FSIP2Q5CZC0 6907 aa6.61□□□□□ -1.35
KRT6A-201ENST00000330722 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
KRT6A-201ENST00000330722 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
KRT6A-201ENST00000330722 MT1EP04732 61 aa6.41□□□□□ -1.38
KRT6A-201ENST00000330722 MT1LQ93083 61 aa6.39□□□□□ -1.39
KRT6A-201ENST00000330722 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
KRT6A-201ENST00000330722 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
KRT6A-201ENST00000330722 INE1O15225 51 aa6.28□□□□□ -1.4
KRT6A-201ENST00000330722 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
KRT6A-201ENST00000330722 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
KRT6A-201ENST00000330722 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms