RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 A0A087WTM6 91 aa4.22□□□□□ -1.73
CLRN1-202ENST00000327047 ZNF861PO60384 105 aa4.22□□□□□ -1.73
CLRN1-202ENST00000327047 DNAH8Q96JB1 4490 aa4.22□□□□□ -1.73
CLRN1-202ENST00000327047 IGKV2-30P06310 120 aa4.21□□□□□ -1.73
CLRN1-202ENST00000327047 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
CLRN1-202ENST00000327047 SPINK1P00995 79 aa4.2□□□□□ -1.74
CLRN1-202ENST00000327047 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
CLRN1-202ENST00000327047 C1orf134Q5TEV5 83 aa4.19□□□□□ -1.74
CLRN1-202ENST00000327047 HSPG2P98160 4391 aa4.18□□□□□ -1.74
CLRN1-202ENST00000327047 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
CLRN1-202ENST00000327047 DNAH5Q8TE73 4624 aa4.17□□□□□ -1.74
CLRN1-202ENST00000327047 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
CLRN1-202ENST00000327047 LRP1BQ9NZR2 4599 aa4.14□□□□□ -1.75
CLRN1-202ENST00000327047 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
CLRN1-202ENST00000327047 A8MUU9 505 aa4.12□□□□□ -1.75
CLRN1-202ENST00000327047 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
CLRN1-202ENST00000327047 H0YAA0 97 aa4.12□□□□□ -1.75
CLRN1-202ENST00000327047 PKD1P98161 4303 aa4.11□□□□□ -1.75
CLRN1-202ENST00000327047 KRTAP10-2P60368 255 aa4.11□□□□□ -1.75
CLRN1-202ENST00000327047 ROMO1P60602 79 aa4.11□□□□□ -1.75
CLRN1-202ENST00000327047 LINC00304Q8N9R0 145 aa4.11□□□□□ -1.75
CLRN1-202ENST00000327047 Q6ZSA8 131 aa4.11□□□□□ -1.75
CLRN1-202ENST00000327047 SSBP3-AS1Q7Z2R9 100 aa4.11□□□□□ -1.75
CLRN1-202ENST00000327047 CRIPTQ9P021 101 aa4.1□□□□□ -1.75
CLRN1-202ENST00000327047 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
CLRN1-202ENST00000327047 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
CLRN1-202ENST00000327047 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
CLRN1-202ENST00000327047 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
CLRN1-202ENST00000327047 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
CLRN1-202ENST00000327047 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
CLRN1-202ENST00000327047 KRTAP13-2Q52LG2 175 aa4.06□□□□□ -1.76
CLRN1-202ENST00000327047 KRTAP10-1P60331 282 aa4.06□□□□□ -1.76
CLRN1-202ENST00000327047 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
CLRN1-202ENST00000327047 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
CLRN1-202ENST00000327047 A0A1B0GU33 70 aa4.04□□□□□ -1.76
CLRN1-202ENST00000327047 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
CLRN1-202ENST00000327047 P0C880 135 aa4.02□□□□□ -1.77
CLRN1-202ENST00000327047 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
CLRN1-202ENST00000327047 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
CLRN1-202ENST00000327047 Q5VSD8 79 aa3.99□□□□□ -1.77
CLRN1-202ENST00000327047 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
CLRN1-202ENST00000327047 APOBP04114 4563 aaKnown RBP3.98□□□□□ -1.77
CLRN1-202ENST00000327047 KRTAP1-4P0C5Y4 121 aa3.98□□□□□ -1.77
CLRN1-202ENST00000327047 K7ERS5 55 aa3.97□□□□□ -1.77
CLRN1-202ENST00000327047 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
CLRN1-202ENST00000327047 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
CLRN1-202ENST00000327047 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
CLRN1-202ENST00000327047 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
CLRN1-202ENST00000327047 MUC2Q02817 5179 aa3.94□□□□□ -1.78
CLRN1-202ENST00000327047 FAT1Q14517 4588 aa3.94□□□□□ -1.78
CLRN1-202ENST00000327047 C9orf92A6NGG3 77 aa3.92□□□□□ -1.78
CLRN1-202ENST00000327047 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.79
CLRN1-202ENST00000327047 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
CLRN1-202ENST00000327047 A0A0D9SG42 100 aa3.89□□□□□ -1.79
CLRN1-202ENST00000327047 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
CLRN1-202ENST00000327047 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
CLRN1-202ENST00000327047 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
CLRN1-202ENST00000327047 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
CLRN1-202ENST00000327047 SMR3BP02814 79 aaPredicted RBP3.86□□□□□ -1.79
CLRN1-202ENST00000327047 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
CLRN1-202ENST00000327047 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.79
CLRN1-202ENST00000327047 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.79
CLRN1-202ENST00000327047 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
CLRN1-202ENST00000327047 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
CLRN1-202ENST00000327047 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
CLRN1-202ENST00000327047 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
CLRN1-202ENST00000327047 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
CLRN1-202ENST00000327047 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
CLRN1-202ENST00000327047 TNXBP22105 4242 aa3.77□□□□□ -1.81
CLRN1-202ENST00000327047 S4R3F8 94 aa3.75□□□□□ -1.81
CLRN1-202ENST00000327047 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
CLRN1-202ENST00000327047 KRTAP10-8P60410 259 aa3.71□□□□□ -1.81
CLRN1-202ENST00000327047 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
CLRN1-202ENST00000327047 LRP2P98164 4655 aa3.67□□□□□ -1.82
CLRN1-202ENST00000327047 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
CLRN1-202ENST00000327047 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
CLRN1-202ENST00000327047 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
CLRN1-202ENST00000327047 M0QZ58 72 aa3.55□□□□□ -1.84
CLRN1-202ENST00000327047 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
CLRN1-202ENST00000327047 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
CLRN1-202ENST00000327047 LPAP08519 4548 aa3.53□□□□□ -1.84
CLRN1-202ENST00000327047 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
CLRN1-202ENST00000327047 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
CLRN1-202ENST00000327047 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
CLRN1-202ENST00000327047 R4GN34 69 aa3.47□□□□□ -1.85
CLRN1-202ENST00000327047 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
CLRN1-202ENST00000327047 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
CLRN1-202ENST00000327047 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
CLRN1-202ENST00000327047 KRTAP4-1Q9BYQ7 146 aa3.37□□□□□ -1.87
CLRN1-202ENST00000327047 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
CLRN1-202ENST00000327047 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
CLRN1-202ENST00000327047 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
CLRN1-202ENST00000327047 NEBP20929 6669 aa3.32□□□□□ -1.88
CLRN1-202ENST00000327047 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
CLRN1-202ENST00000327047 USH2AO75445 5202 aa3.27□□□□□ -1.89
CLRN1-202ENST00000327047 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
CLRN1-202ENST00000327047 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
CLRN1-202ENST00000327047 TNP1P09430 55 aa3.2□□□□□ -1.9
CLRN1-202ENST00000327047 FLGP20930 4061 aaPredicted RBP3.2□□□□□ -1.9
CLRN1-202ENST00000327047 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms