RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 M0QZ58 72 aa3.4□□□□□ -1.87
CAST-202ENST00000325674 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
CAST-202ENST00000325674 ACANP16112 2415 aa3.39□□□□□ -1.87
CAST-202ENST00000325674 STARD9Q9P2P6 4700 aa3.38□□□□□ -1.87
CAST-202ENST00000325674 APOBP04114 4563 aaKnown RBP3.38□□□□□ -1.87
CAST-202ENST00000325674 UBE2DNLQ8IWF7 75 aa3.38□□□□□ -1.87
CAST-202ENST00000325674 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
CAST-202ENST00000325674 NOTCH2Q04721 2471 aa3.37□□□□□ -1.87
CAST-202ENST00000325674 NOTCH1P46531 2555 aa3.37□□□□□ -1.87
CAST-202ENST00000325674 HSPG2P98160 4391 aa3.37□□□□□ -1.87
CAST-202ENST00000325674 LCE2AQ5TA79 106 aaPredicted RBP3.36□□□□□ -1.87
CAST-202ENST00000325674 INE1O15225 51 aa3.36□□□□□ -1.87
CAST-202ENST00000325674 FLNBO75369 2602 aaKnown RBP3.35□□□□□ -1.87
CAST-202ENST00000325674 FASNP49327 2511 aaKnown RBP3.34□□□□□ -1.87
CAST-202ENST00000325674 STAB2Q8WWQ8 2551 aa3.33□□□□□ -1.88
CAST-202ENST00000325674 NSD1Q96L73 2696 aaPredicted RBP3.33□□□□□ -1.88
CAST-202ENST00000325674 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
CAST-202ENST00000325674 ATRQ13535 2644 aa3.31□□□□□ -1.88
CAST-202ENST00000325674 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
CAST-202ENST00000325674 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
CAST-202ENST00000325674 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
CAST-202ENST00000325674 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
CAST-202ENST00000325674 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
CAST-202ENST00000325674 DYNC1H1Q14204 4646 aaKnown RBP3.23□□□□□ -1.89
CAST-202ENST00000325674 R4GN34 69 aa3.23□□□□□ -1.89
CAST-202ENST00000325674 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
CAST-202ENST00000325674 LCE2BO14633 110 aa3.22□□□□□ -1.89
CAST-202ENST00000325674 KRTAP10-2P60368 255 aa3.22□□□□□ -1.89
CAST-202ENST00000325674 FAT1Q14517 4588 aa3.18□□□□□ -1.9
CAST-202ENST00000325674 DMBT1Q9UGM3 2413 aaPredicted RBP3.16□□□□□ -1.9
CAST-202ENST00000325674 KRTAP10-1P60331 282 aa3.16□□□□□ -1.9
CAST-202ENST00000325674 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.9
CAST-202ENST00000325674 Q5VSD8 79 aa3.13□□□□□ -1.91
CAST-202ENST00000325674 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
CAST-202ENST00000325674 STAB1Q9NY15 2570 aa3.1□□□□□ -1.91
CAST-202ENST00000325674 LORP23490 312 aaPredicted RBP3.09□□□□□ -1.91
CAST-202ENST00000325674 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
CAST-202ENST00000325674 HYDINQ4G0P3 5121 aa3.04□□□□□ -1.92
CAST-202ENST00000325674 KRTAP21-3Q3LHN1 58 aa3.04□□□□□ -1.92
CAST-202ENST00000325674 DNHD1Q96M86 4753 aa3.02□□□□□ -1.93
CAST-202ENST00000325674 LPAP08519 4548 aa2.99□□□□□ -1.93
CAST-202ENST00000325674 TNP1P09430 55 aa2.96□□□□□ -1.94
CAST-202ENST00000325674 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.94
CAST-202ENST00000325674 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
CAST-202ENST00000325674 LCE2CQ5TA81 110 aa2.92□□□□□ -1.94
CAST-202ENST00000325674 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
CAST-202ENST00000325674 HERC1Q15751 4861 aa2.9□□□□□ -1.94
CAST-202ENST00000325674 RYR2Q92736 4967 aa2.87□□□□□ -1.95
CAST-202ENST00000325674 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
CAST-202ENST00000325674 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
CAST-202ENST00000325674 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.95
CAST-202ENST00000325674 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
CAST-202ENST00000325674 KMT2CQ8NEZ4 4911 aaKnown RBP2.82□□□□□ -1.96
CAST-202ENST00000325674 LRP2P98164 4655 aa2.8□□□□□ -1.96
CAST-202ENST00000325674 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
CAST-202ENST00000325674 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
CAST-202ENST00000325674 KRTAP9-2Q9BYQ4 174 aa2.77□□□□□ -1.97
CAST-202ENST00000325674 SMR3BP02814 79 aaPredicted RBP2.76□□□□□ -1.97
CAST-202ENST00000325674 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
CAST-202ENST00000325674 MT1HL1P0DM35 61 aa2.74□□□□□ -1.97
CAST-202ENST00000325674 RYR1P21817 5038 aa2.74□□□□□ -1.97
CAST-202ENST00000325674 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
CAST-202ENST00000325674 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
CAST-202ENST00000325674 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
CAST-202ENST00000325674 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
CAST-202ENST00000325674 KRTAP4-8A0A0G2JLE6 195 aa2.71□□□□□ -1.98
CAST-202ENST00000325674 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.7□□□□□ -1.98
CAST-202ENST00000325674 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
CAST-202ENST00000325674 RYR3Q15413 4870 aa2.68□□□□□ -1.98
CAST-202ENST00000325674 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
CAST-202ENST00000325674 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
CAST-202ENST00000325674 KRTAP17-1Q9BYP8 105 aa2.65□□□□□ -1.99
CAST-202ENST00000325674 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
CAST-202ENST00000325674 KRTAP19-1Q8IUB9 90 aa2.64□□□□□ -1.99
CAST-202ENST00000325674 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
CAST-202ENST00000325674 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
CAST-202ENST00000325674 KRTAP9-4Q9BYQ2 154 aa2.63□□□□□ -1.99
CAST-202ENST00000325674 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
CAST-202ENST00000325674 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
CAST-202ENST00000325674 BIRC6Q9NR09 4857 aa2.61□□□□□ -1.99
CAST-202ENST00000325674 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
CAST-202ENST00000325674 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
CAST-202ENST00000325674 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
CAST-202ENST00000325674 ABCA13Q86UQ4 5058 aa2.52□□□□□ -2.01
CAST-202ENST00000325674 HERC2O95714 4834 aa2.51□□□□□ -2.01
CAST-202ENST00000325674 HMCN2Q8NDA2 5059 aa2.51□□□□□ -2.01
CAST-202ENST00000325674 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
CAST-202ENST00000325674 PCLOQ9Y6V0 5065 aa2.5□□□□□ -2.01
CAST-202ENST00000325674 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
CAST-202ENST00000325674 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
CAST-202ENST00000325674 MT1XP80297 61 aa2.49□□□□□ -2.01
CAST-202ENST00000325674 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
CAST-202ENST00000325674 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
CAST-202ENST00000325674 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
CAST-202ENST00000325674 KRTAP4-5Q9BYR2 181 aa2.44□□□□□ -2.02
CAST-202ENST00000325674 MUC2Q02817 5179 aa2.44□□□□□ -2.02
CAST-202ENST00000325674 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
CAST-202ENST00000325674 MT1BP07438 61 aa2.4□□□□□ -2.03
CAST-202ENST00000325674 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
CAST-202ENST00000325674 EPPK1P58107 5090 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms