RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
TRAPPC12-201ENST00000324266 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
TRAPPC12-201ENST00000324266 PKHD1L1Q86WI1 4243 aa9.69□□□□□ -0.86
TRAPPC12-201ENST00000324266 KRTAP3-1Q9BYR8 98 aa9.68□□□□□ -0.86
TRAPPC12-201ENST00000324266 EPPK1P58107 5090 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-201ENST00000324266 HSPG2P98160 4391 aa9.6□□□□□ -0.87
TRAPPC12-201ENST00000324266 KIAA1109Q2LD37 5005 aa9.55□□□□□ -0.88
TRAPPC12-201ENST00000324266 C10orf95Q9H7T3 257 aa9.55□□□□□ -0.88
TRAPPC12-201ENST00000324266 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
TRAPPC12-201ENST00000324266 KRTAP10-4P60372 401 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC12-201ENST00000324266 RYR1P21817 5038 aa9.52□□□□□ -0.89
TRAPPC12-201ENST00000324266 LUZP6Q538Z0 58 aa9.51□□□□□ -0.89
TRAPPC12-201ENST00000324266 KRTAP17-1Q9BYP8 105 aa9.48□□□□□ -0.89
TRAPPC12-201ENST00000324266 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
TRAPPC12-201ENST00000324266 Q5VSD8 79 aa9.44□□□□□ -0.9
TRAPPC12-201ENST00000324266 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.91
TRAPPC12-201ENST00000324266 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
TRAPPC12-201ENST00000324266 DMBT1Q9UGM3 2413 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-201ENST00000324266 TNXBP22105 4242 aa9.32□□□□□ -0.92
TRAPPC12-201ENST00000324266 MYCBP2O75592 4640 aa9.3□□□□□ -0.92
TRAPPC12-201ENST00000324266 A0A0D9SG42 100 aa9.29□□□□□ -0.92
TRAPPC12-201ENST00000324266 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
TRAPPC12-201ENST00000324266 KRTAP4-5Q9BYR2 181 aa9.24□□□□□ -0.93
TRAPPC12-201ENST00000324266 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
TRAPPC12-201ENST00000324266 KRTAP10-6P60371 365 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC12-201ENST00000324266 BIRC6Q9NR09 4857 aa9.21□□□□□ -0.93
TRAPPC12-201ENST00000324266 KRTAP10-8P60410 259 aa9.2□□□□□ -0.94
TRAPPC12-201ENST00000324266 XP32Q5T750 250 aa9.13□□□□□ -0.95
TRAPPC12-201ENST00000324266 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
TRAPPC12-201ENST00000324266 S4R3F8 94 aa9.13□□□□□ -0.95
TRAPPC12-201ENST00000324266 ABCA13Q86UQ4 5058 aa9.11□□□□□ -0.95
TRAPPC12-201ENST00000324266 HERC2O95714 4834 aa9.1□□□□□ -0.95
TRAPPC12-201ENST00000324266 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
TRAPPC12-201ENST00000324266 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
TRAPPC12-201ENST00000324266 LPAP08519 4548 aa9.01□□□□□ -0.97
TRAPPC12-201ENST00000324266 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
TRAPPC12-201ENST00000324266 LRP2P98164 4655 aa8.91□□□□□ -0.98
TRAPPC12-201ENST00000324266 KRTAP12-1P59990 96 aa8.9□□□□□ -0.99
TRAPPC12-201ENST00000324266 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
TRAPPC12-201ENST00000324266 PCLOQ9Y6V0 5065 aa8.89□□□□□ -0.99
TRAPPC12-201ENST00000324266 J3QL48 77 aa8.85□□□□□ -0.99
TRAPPC12-201ENST00000324266 HERC1Q15751 4861 aa8.68□□□□□ -1.02
TRAPPC12-201ENST00000324266 M0QZ58 72 aa8.63□□□□□ -1.03
TRAPPC12-201ENST00000324266 R4GN34 69 aa8.48□□□□□ -1.05
TRAPPC12-201ENST00000324266 MUC17Q685J3 4493 aa8.46□□□□□ -1.06
TRAPPC12-201ENST00000324266 HMCN2Q8NDA2 5059 aa8.46□□□□□ -1.06
TRAPPC12-201ENST00000324266 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
TRAPPC12-201ENST00000324266 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC12-201ENST00000324266 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
TRAPPC12-201ENST00000324266 MUC2Q02817 5179 aa8.29□□□□□ -1.08
TRAPPC12-201ENST00000324266 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
TRAPPC12-201ENST00000324266 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
TRAPPC12-201ENST00000324266 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
TRAPPC12-201ENST00000324266 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
TRAPPC12-201ENST00000324266 SPRR5A0A1B0GTR4 108 aa8.12□□□□□ -1.11
TRAPPC12-201ENST00000324266 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
TRAPPC12-201ENST00000324266 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-201ENST00000324266 INE1O15225 51 aa7.94□□□□□ -1.14
TRAPPC12-201ENST00000324266 FAT4Q6V0I7 4981 aa7.89□□□□□ -1.15
TRAPPC12-201ENST00000324266 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
TRAPPC12-201ENST00000324266 TNP1P09430 55 aa7.75□□□□□ -1.17
TRAPPC12-201ENST00000324266 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
TRAPPC12-201ENST00000324266 MT1HP80294 61 aa7.64□□□□□ -1.19
TRAPPC12-201ENST00000324266 M0R2T5 61 aa7.59□□□□□ -1.19
TRAPPC12-201ENST00000324266 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
TRAPPC12-201ENST00000324266 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
TRAPPC12-201ENST00000324266 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
TRAPPC12-201ENST00000324266 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC12-201ENST00000324266 MT1FP04733 61 aa7.36□□□□□ -1.23
TRAPPC12-201ENST00000324266 KRTAP10-10P60014 251 aa7.35□□□□□ -1.23
TRAPPC12-201ENST00000324266 KRTAP9-8Q9BYQ0 159 aa7.35□□□□□ -1.23
TRAPPC12-201ENST00000324266 MT2AP02795 61 aa7.33□□□□□ -1.24
TRAPPC12-201ENST00000324266 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
TRAPPC12-201ENST00000324266 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
TRAPPC12-201ENST00000324266 MT1BP07438 61 aa7.13□□□□□ -1.27
TRAPPC12-201ENST00000324266 MT1XP80297 61 aa7.12□□□□□ -1.27
TRAPPC12-201ENST00000324266 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
TRAPPC12-201ENST00000324266 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
TRAPPC12-201ENST00000324266 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
TRAPPC12-201ENST00000324266 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
TRAPPC12-201ENST00000324266 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC12-201ENST00000324266 LCE2BO14633 110 aa6.93□□□□□ -1.3
TRAPPC12-201ENST00000324266 USH2AO75445 5202 aa6.91□□□□□ -1.3
TRAPPC12-201ENST00000324266 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
TRAPPC12-201ENST00000324266 KMT2DO14686 5537 aa6.76□□□□□ -1.33
TRAPPC12-201ENST00000324266 KRTAP19-5Q3LI72 72 aa6.7□□□□□ -1.34
TRAPPC12-201ENST00000324266 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC12-201ENST00000324266 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
TRAPPC12-201ENST00000324266 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
TRAPPC12-201ENST00000324266 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
TRAPPC12-201ENST00000324266 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
TRAPPC12-201ENST00000324266 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
TRAPPC12-201ENST00000324266 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
TRAPPC12-201ENST00000324266 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
TRAPPC12-201ENST00000324266 KRTAP2-3P0C7H8 128 aa6.41□□□□□ -1.38
TRAPPC12-201ENST00000324266 KRTAP2-4Q9BYR9 128 aa6.41□□□□□ -1.38
TRAPPC12-201ENST00000324266 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
TRAPPC12-201ENST00000324266 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC12-201ENST00000324266 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
TRAPPC12-201ENST00000324266 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms