RNA–Protein interactions for RNA: ENST00000323446.9

CPT1C-202, Transcript of carnitine palmitoyltransferase 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPT1C, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-202ENST00000323446 RYR2Q92736 4967 aa7.19□□□□□ -1.26
CPT1C-202ENST00000323446 C9orf92A6NGG3 77 aa7.18□□□□□ -1.26
CPT1C-202ENST00000323446 RYR3Q15413 4870 aa7.17□□□□□ -1.26
CPT1C-202ENST00000323446 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.26
CPT1C-202ENST00000323446 DMBT1Q9UGM3 2413 aaPredicted RBP7.13□□□□□ -1.27
CPT1C-202ENST00000323446 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
CPT1C-202ENST00000323446 A0A0A0MQY5 61 aa7.06□□□□□ -1.28
CPT1C-202ENST00000323446 APOBP04114 4563 aaKnown RBP7.06□□□□□ -1.28
CPT1C-202ENST00000323446 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
CPT1C-202ENST00000323446 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
CPT1C-202ENST00000323446 S4R3F8 94 aa7.01□□□□□ -1.29
CPT1C-202ENST00000323446 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
CPT1C-202ENST00000323446 LRP1Q07954 4544 aaKnown RBP6.99□□□□□ -1.29
CPT1C-202ENST00000323446 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
CPT1C-202ENST00000323446 PKHD1L1Q86WI1 4243 aa6.96□□□□□ -1.3
CPT1C-202ENST00000323446 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
CPT1C-202ENST00000323446 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
CPT1C-202ENST00000323446 EPPK1P58107 5090 aaKnown RBP6.93□□□□□ -1.3
CPT1C-202ENST00000323446 MYCBP2O75592 4640 aa6.9□□□□□ -1.31
CPT1C-202ENST00000323446 XP32Q5T750 250 aa6.87□□□□□ -1.31
CPT1C-202ENST00000323446 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
CPT1C-202ENST00000323446 KIAA1109Q2LD37 5005 aa6.83□□□□□ -1.32
CPT1C-202ENST00000323446 HSPG2P98160 4391 aa6.82□□□□□ -1.32
CPT1C-202ENST00000323446 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
CPT1C-202ENST00000323446 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
CPT1C-202ENST00000323446 TNXBP22105 4242 aa6.79□□□□□ -1.32
CPT1C-202ENST00000323446 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
CPT1C-202ENST00000323446 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
CPT1C-202ENST00000323446 RYR1P21817 5038 aa6.74□□□□□ -1.33
CPT1C-202ENST00000323446 Q5VSD8 79 aa6.74□□□□□ -1.33
CPT1C-202ENST00000323446 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
CPT1C-202ENST00000323446 LPAP08519 4548 aa6.66□□□□□ -1.34
CPT1C-202ENST00000323446 M0QZ58 72 aa6.64□□□□□ -1.35
CPT1C-202ENST00000323446 LRP2P98164 4655 aa6.57□□□□□ -1.36
CPT1C-202ENST00000323446 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
CPT1C-202ENST00000323446 BIRC6Q9NR09 4857 aa6.55□□□□□ -1.36
CPT1C-202ENST00000323446 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
CPT1C-202ENST00000323446 ABCA13Q86UQ4 5058 aa6.51□□□□□ -1.37
CPT1C-202ENST00000323446 HERC2O95714 4834 aa6.44□□□□□ -1.38
CPT1C-202ENST00000323446 R4GN34 69 aa6.41□□□□□ -1.38
CPT1C-202ENST00000323446 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.38
CPT1C-202ENST00000323446 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
CPT1C-202ENST00000323446 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
CPT1C-202ENST00000323446 HERC1Q15751 4861 aa6.24□□□□□ -1.41
CPT1C-202ENST00000323446 J3QL48 77 aa6.23□□□□□ -1.41
CPT1C-202ENST00000323446 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
CPT1C-202ENST00000323446 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
CPT1C-202ENST00000323446 MUC2Q02817 5179 aa6.17□□□□□ -1.42
CPT1C-202ENST00000323446 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
CPT1C-202ENST00000323446 MUC17Q685J3 4493 aa6.15□□□□□ -1.43
CPT1C-202ENST00000323446 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
CPT1C-202ENST00000323446 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
CPT1C-202ENST00000323446 TNP1P09430 55 aa5.98□□□□□ -1.45
CPT1C-202ENST00000323446 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
CPT1C-202ENST00000323446 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
CPT1C-202ENST00000323446 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
CPT1C-202ENST00000323446 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
CPT1C-202ENST00000323446 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
CPT1C-202ENST00000323446 FAT4Q6V0I7 4981 aa5.87□□□□□ -1.47
CPT1C-202ENST00000323446 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
CPT1C-202ENST00000323446 INE1O15225 51 aa5.78□□□□□ -1.48
CPT1C-202ENST00000323446 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
CPT1C-202ENST00000323446 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
CPT1C-202ENST00000323446 M0R2T5 61 aa5.59□□□□□ -1.52
CPT1C-202ENST00000323446 MT1HP80294 61 aa5.46□□□□□ -1.53
CPT1C-202ENST00000323446 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.53
CPT1C-202ENST00000323446 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
CPT1C-202ENST00000323446 MT1FP04733 61 aa5.42□□□□□ -1.54
CPT1C-202ENST00000323446 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
CPT1C-202ENST00000323446 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
CPT1C-202ENST00000323446 MT2AP02795 61 aa5.38□□□□□ -1.55
CPT1C-202ENST00000323446 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
CPT1C-202ENST00000323446 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
CPT1C-202ENST00000323446 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
CPT1C-202ENST00000323446 MT1BP07438 61 aa5.19□□□□□ -1.58
CPT1C-202ENST00000323446 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
CPT1C-202ENST00000323446 USH2AO75445 5202 aa5.15□□□□□ -1.58
CPT1C-202ENST00000323446 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
CPT1C-202ENST00000323446 MT1XP80297 61 aa5.15□□□□□ -1.59
CPT1C-202ENST00000323446 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
CPT1C-202ENST00000323446 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.6
CPT1C-202ENST00000323446 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
CPT1C-202ENST00000323446 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
CPT1C-202ENST00000323446 KMT2DO14686 5537 aa5.07□□□□□ -1.6
CPT1C-202ENST00000323446 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
CPT1C-202ENST00000323446 LCE2BO14633 110 aa4.97□□□□□ -1.61
CPT1C-202ENST00000323446 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
CPT1C-202ENST00000323446 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
CPT1C-202ENST00000323446 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
CPT1C-202ENST00000323446 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
CPT1C-202ENST00000323446 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
CPT1C-202ENST00000323446 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
CPT1C-202ENST00000323446 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
CPT1C-202ENST00000323446 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
CPT1C-202ENST00000323446 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
CPT1C-202ENST00000323446 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.66
CPT1C-202ENST00000323446 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.67
CPT1C-202ENST00000323446 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
CPT1C-202ENST00000323446 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
CPT1C-202ENST00000323446 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms