RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 DNAH8Q96JB1 4490 aa8.23□□□□□ -1.09
SFXN1-201ENST00000321442 CMYA5Q8N3K9 4069 aa8.22□□□□□ -1.09
SFXN1-201ENST00000321442 DNAH7Q8WXX0 4024 aa8.2□□□□□ -1.1
SFXN1-201ENST00000321442 DYNC1H1Q14204 4646 aaKnown RBP8.2□□□□□ -1.1
SFXN1-201ENST00000321442 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
SFXN1-201ENST00000321442 RYR1P21817 5038 aa8.18□□□□□ -1.1
SFXN1-201ENST00000321442 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
SFXN1-201ENST00000321442 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
SFXN1-201ENST00000321442 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
SFXN1-201ENST00000321442 TNP1P09430 55 aa8.12□□□□□ -1.11
SFXN1-201ENST00000321442 DNAH2Q9P225 4427 aa8.1□□□□□ -1.11
SFXN1-201ENST00000321442 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
SFXN1-201ENST00000321442 MT1HL1P0DM35 61 aa8.09□□□□□ -1.11
SFXN1-201ENST00000321442 DNAH17Q9UFH2 4485 aa8.06□□□□□ -1.12
SFXN1-201ENST00000321442 HYDINQ4G0P3 5121 aa8.06□□□□□ -1.12
SFXN1-201ENST00000321442 DNAH6Q9C0G6 4158 aa8.06□□□□□ -1.12
SFXN1-201ENST00000321442 DNAH3Q8TD57 4116 aa8.05□□□□□ -1.12
SFXN1-201ENST00000321442 RYR3Q15413 4870 aa8.05□□□□□ -1.12
SFXN1-201ENST00000321442 FAT3Q8TDW7 4589 aa8.04□□□□□ -1.12
SFXN1-201ENST00000321442 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
SFXN1-201ENST00000321442 FRAS1Q86XX4 4008 aa7.98□□□□□ -1.13
SFXN1-201ENST00000321442 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
SFXN1-201ENST00000321442 KMT2CQ8NEZ4 4911 aaKnown RBP7.96□□□□□ -1.13
SFXN1-201ENST00000321442 LRP1Q07954 4544 aaKnown RBP7.96□□□□□ -1.13
SFXN1-201ENST00000321442 SACSQ9NZJ4 4579 aa7.95□□□□□ -1.14
SFXN1-201ENST00000321442 PKHD1P08F94 4074 aa7.94□□□□□ -1.14
SFXN1-201ENST00000321442 DYNC2H1Q8NCM8 4307 aaKnown RBP7.93□□□□□ -1.14
SFXN1-201ENST00000321442 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
SFXN1-201ENST00000321442 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.15
SFXN1-201ENST00000321442 APOBP04114 4563 aaKnown RBP7.9□□□□□ -1.15
SFXN1-201ENST00000321442 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
SFXN1-201ENST00000321442 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
SFXN1-201ENST00000321442 HECTD4Q9Y4D8 3996 aa7.78□□□□□ -1.16
SFXN1-201ENST00000321442 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.17
SFXN1-201ENST00000321442 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
SFXN1-201ENST00000321442 RYR2Q92736 4967 aa7.73□□□□□ -1.17
SFXN1-201ENST00000321442 KRTAP15-1Q3LI76 137 aa7.71□□□□□ -1.18
SFXN1-201ENST00000321442 HERC2O95714 4834 aa7.62□□□□□ -1.19
SFXN1-201ENST00000321442 LRP2P98164 4655 aa7.6□□□□□ -1.19
SFXN1-201ENST00000321442 EPPK1P58107 5090 aaKnown RBP7.5□□□□□ -1.21
SFXN1-201ENST00000321442 KRTAP4-1Q9BYQ7 146 aa7.42□□□□□ -1.22
SFXN1-201ENST00000321442 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
SFXN1-201ENST00000321442 PKD1P98161 4303 aa7.4□□□□□ -1.22
SFXN1-201ENST00000321442 HSPG2P98160 4391 aa7.4□□□□□ -1.22
SFXN1-201ENST00000321442 PCLOQ9Y6V0 5065 aa7.32□□□□□ -1.24
SFXN1-201ENST00000321442 LPAP08519 4548 aa7.3□□□□□ -1.24
SFXN1-201ENST00000321442 ABCA13Q86UQ4 5058 aa7.25□□□□□ -1.25
SFXN1-201ENST00000321442 BIRC6Q9NR09 4857 aa7.19□□□□□ -1.26
SFXN1-201ENST00000321442 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
SFXN1-201ENST00000321442 HERC1Q15751 4861 aa7.11□□□□□ -1.27
SFXN1-201ENST00000321442 RNF213Q63HN8 5207 aa7.08□□□□□ -1.28
SFXN1-201ENST00000321442 MUC2Q02817 5179 aa7.06□□□□□ -1.28
SFXN1-201ENST00000321442 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
SFXN1-201ENST00000321442 PKHD1L1Q86WI1 4243 aa6.95□□□□□ -1.3
SFXN1-201ENST00000321442 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
SFXN1-201ENST00000321442 UBR4Q5T4S7 5183 aa6.91□□□□□ -1.3
SFXN1-201ENST00000321442 MT1HP80294 61 aa6.9□□□□□ -1.3
SFXN1-201ENST00000321442 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
SFXN1-201ENST00000321442 TNXBP22105 4242 aa6.86□□□□□ -1.31
SFXN1-201ENST00000321442 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
SFXN1-201ENST00000321442 KRTAP12-3P60328 96 aa6.84□□□□□ -1.32
SFXN1-201ENST00000321442 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
SFXN1-201ENST00000321442 INE1O15225 51 aa6.77□□□□□ -1.33
SFXN1-201ENST00000321442 MT2AP02795 61 aa6.77□□□□□ -1.33
SFXN1-201ENST00000321442 MT1FP04733 61 aa6.75□□□□□ -1.33
SFXN1-201ENST00000321442 LCE2CQ5TA81 110 aa6.52□□□□□ -1.36
SFXN1-201ENST00000321442 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
SFXN1-201ENST00000321442 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
SFXN1-201ENST00000321442 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
SFXN1-201ENST00000321442 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
SFXN1-201ENST00000321442 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
SFXN1-201ENST00000321442 KRTAP19-2Q3LHN2 52 aa6.4□□□□□ -1.39
SFXN1-201ENST00000321442 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
SFXN1-201ENST00000321442 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
SFXN1-201ENST00000321442 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.39
SFXN1-201ENST00000321442 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
SFXN1-201ENST00000321442 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
SFXN1-201ENST00000321442 MT1BP07438 61 aa6.19□□□□□ -1.42
SFXN1-201ENST00000321442 USH2AO75445 5202 aa6.19□□□□□ -1.42
SFXN1-201ENST00000321442 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
SFXN1-201ENST00000321442 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
SFXN1-201ENST00000321442 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
SFXN1-201ENST00000321442 MT1XP80297 61 aa6.12□□□□□ -1.43
SFXN1-201ENST00000321442 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
SFXN1-201ENST00000321442 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
SFXN1-201ENST00000321442 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
SFXN1-201ENST00000321442 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
SFXN1-201ENST00000321442 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
SFXN1-201ENST00000321442 LCE2BO14633 110 aa6.07□□□□□ -1.44
SFXN1-201ENST00000321442 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
SFXN1-201ENST00000321442 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
SFXN1-201ENST00000321442 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
SFXN1-201ENST00000321442 KMT2DO14686 5537 aa5.86□□□□□ -1.47
SFXN1-201ENST00000321442 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
SFXN1-201ENST00000321442 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
SFXN1-201ENST00000321442 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
SFXN1-201ENST00000321442 MT1GP13640 62 aa5.59□□□□□ -1.51
SFXN1-201ENST00000321442 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
SFXN1-201ENST00000321442 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
SFXN1-201ENST00000321442 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms