RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
CLK1-201ENST00000321356 H0YAA0 97 aa4.64□□□□□ -1.67
CLK1-201ENST00000321356 FLG2Q5D862 2391 aaPredicted RBP4.61□□□□□ -1.67
CLK1-201ENST00000321356 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
CLK1-201ENST00000321356 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
CLK1-201ENST00000321356 A0A1B0GU33 70 aa4.6□□□□□ -1.67
CLK1-201ENST00000321356 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
CLK1-201ENST00000321356 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
CLK1-201ENST00000321356 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
CLK1-201ENST00000321356 RYR2Q92736 4967 aa4.58□□□□□ -1.68
CLK1-201ENST00000321356 CSAG1Q6PB30 78 aa4.57□□□□□ -1.68
CLK1-201ENST00000321356 TNXBP22105 4242 aa4.56□□□□□ -1.68
CLK1-201ENST00000321356 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
CLK1-201ENST00000321356 HSPG2P98160 4391 aa4.54□□□□□ -1.68
CLK1-201ENST00000321356 LRP1Q07954 4544 aaKnown RBP4.54□□□□□ -1.68
CLK1-201ENST00000321356 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
CLK1-201ENST00000321356 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
CLK1-201ENST00000321356 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
CLK1-201ENST00000321356 KMT2CQ8NEZ4 4911 aaKnown RBP4.5□□□□□ -1.69
CLK1-201ENST00000321356 RPL37P61927 97 aaKnown RBP4.49□□□□□ -1.69
CLK1-201ENST00000321356 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
CLK1-201ENST00000321356 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
CLK1-201ENST00000321356 K7ERS5 55 aa4.45□□□□□ -1.7
CLK1-201ENST00000321356 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
CLK1-201ENST00000321356 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
CLK1-201ENST00000321356 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
CLK1-201ENST00000321356 Q5VSD8 79 aa4.43□□□□□ -1.7
CLK1-201ENST00000321356 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
CLK1-201ENST00000321356 S4R3F8 94 aa4.41□□□□□ -1.7
CLK1-201ENST00000321356 RYR1P21817 5038 aa4.41□□□□□ -1.7
CLK1-201ENST00000321356 ROMO1P60602 79 aa4.37□□□□□ -1.71
CLK1-201ENST00000321356 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
CLK1-201ENST00000321356 MT1HL1P0DM35 61 aa4.36□□□□□ -1.71
CLK1-201ENST00000321356 P0C880 135 aa4.35□□□□□ -1.71
CLK1-201ENST00000321356 RYR3Q15413 4870 aa4.34□□□□□ -1.71
CLK1-201ENST00000321356 A0A0D9SG42 100 aa4.33□□□□□ -1.72
CLK1-201ENST00000321356 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
CLK1-201ENST00000321356 CRIPTQ9P021 101 aa4.32□□□□□ -1.72
CLK1-201ENST00000321356 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
CLK1-201ENST00000321356 LRP2P98164 4655 aa4.29□□□□□ -1.72
CLK1-201ENST00000321356 LPAP08519 4548 aa4.29□□□□□ -1.72
CLK1-201ENST00000321356 TPRXLQ17RH7 258 aa4.28□□□□□ -1.72
CLK1-201ENST00000321356 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
CLK1-201ENST00000321356 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
CLK1-201ENST00000321356 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
CLK1-201ENST00000321356 M0QZ58 72 aa4.23□□□□□ -1.73
CLK1-201ENST00000321356 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
CLK1-201ENST00000321356 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
CLK1-201ENST00000321356 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
CLK1-201ENST00000321356 H3BS24 57 aa4.19□□□□□ -1.74
CLK1-201ENST00000321356 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
CLK1-201ENST00000321356 EPPK1P58107 5090 aaKnown RBP4.18□□□□□ -1.74
CLK1-201ENST00000321356 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
CLK1-201ENST00000321356 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
CLK1-201ENST00000321356 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
CLK1-201ENST00000321356 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
CLK1-201ENST00000321356 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
CLK1-201ENST00000321356 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.75
CLK1-201ENST00000321356 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
CLK1-201ENST00000321356 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.76
CLK1-201ENST00000321356 R4GN34 69 aa4.08□□□□□ -1.76
CLK1-201ENST00000321356 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
CLK1-201ENST00000321356 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
CLK1-201ENST00000321356 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
CLK1-201ENST00000321356 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
CLK1-201ENST00000321356 HERC2O95714 4834 aa3.97□□□□□ -1.77
CLK1-201ENST00000321356 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
CLK1-201ENST00000321356 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
CLK1-201ENST00000321356 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
CLK1-201ENST00000321356 BIRC6Q9NR09 4857 aa3.94□□□□□ -1.78
CLK1-201ENST00000321356 MUC2Q02817 5179 aa3.88□□□□□ -1.79
CLK1-201ENST00000321356 HERC1Q15751 4861 aa3.88□□□□□ -1.79
CLK1-201ENST00000321356 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
CLK1-201ENST00000321356 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
CLK1-201ENST00000321356 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
CLK1-201ENST00000321356 PCLOQ9Y6V0 5065 aa3.8□□□□□ -1.8
CLK1-201ENST00000321356 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
CLK1-201ENST00000321356 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
CLK1-201ENST00000321356 TNP1P09430 55 aa3.75□□□□□ -1.81
CLK1-201ENST00000321356 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
CLK1-201ENST00000321356 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.82
CLK1-201ENST00000321356 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
CLK1-201ENST00000321356 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
CLK1-201ENST00000321356 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
CLK1-201ENST00000321356 MT1HP80294 61 aa3.63□□□□□ -1.83
CLK1-201ENST00000321356 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
CLK1-201ENST00000321356 MT2AP02795 61 aa3.6□□□□□ -1.83
CLK1-201ENST00000321356 MT1FP04733 61 aa3.59□□□□□ -1.83
CLK1-201ENST00000321356 M0R2T5 61 aa3.58□□□□□ -1.84
CLK1-201ENST00000321356 UBR4Q5T4S7 5183 aa3.58□□□□□ -1.84
CLK1-201ENST00000321356 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
CLK1-201ENST00000321356 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
CLK1-201ENST00000321356 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
CLK1-201ENST00000321356 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
CLK1-201ENST00000321356 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
CLK1-201ENST00000321356 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
CLK1-201ENST00000321356 MT1BP07438 61 aa3.5□□□□□ -1.85
CLK1-201ENST00000321356 KRTAP10-5P60370 271 aa3.48□□□□□ -1.85
CLK1-201ENST00000321356 MT1XP80297 61 aa3.48□□□□□ -1.85
CLK1-201ENST00000321356 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms