RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
RTL3-201ENST00000321110 PKD1P98161 4303 aa4.11□□□□□ -1.75
RTL3-201ENST00000321110 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
RTL3-201ENST00000321110 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
RTL3-201ENST00000321110 S4R3F8 94 aa4.09□□□□□ -1.75
RTL3-201ENST00000321110 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
RTL3-201ENST00000321110 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
RTL3-201ENST00000321110 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
RTL3-201ENST00000321110 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
RTL3-201ENST00000321110 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
RTL3-201ENST00000321110 FAT2Q9NYQ8 4349 aa4.06□□□□□ -1.76
RTL3-201ENST00000321110 SACSQ9NZJ4 4579 aa4.06□□□□□ -1.76
RTL3-201ENST00000321110 RYR2Q92736 4967 aa4.06□□□□□ -1.76
RTL3-201ENST00000321110 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
RTL3-201ENST00000321110 RYR3Q15413 4870 aa4□□□□□ -1.77
RTL3-201ENST00000321110 PKHD1P08F94 4074 aa3.96□□□□□ -1.78
RTL3-201ENST00000321110 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
RTL3-201ENST00000321110 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
RTL3-201ENST00000321110 PKHD1L1Q86WI1 4243 aa3.93□□□□□ -1.78
RTL3-201ENST00000321110 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
RTL3-201ENST00000321110 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.79
RTL3-201ENST00000321110 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
RTL3-201ENST00000321110 SEC61BP60468 96 aaKnown RBP3.9□□□□□ -1.79
RTL3-201ENST00000321110 APOBP04114 4563 aaKnown RBP3.89□□□□□ -1.79
RTL3-201ENST00000321110 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
RTL3-201ENST00000321110 EPPK1P58107 5090 aaKnown RBP3.87□□□□□ -1.79
RTL3-201ENST00000321110 FAT1Q14517 4588 aa3.85□□□□□ -1.79
RTL3-201ENST00000321110 M0QZ58 72 aa3.85□□□□□ -1.79
RTL3-201ENST00000321110 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
RTL3-201ENST00000321110 HSPG2P98160 4391 aa3.84□□□□□ -1.79
RTL3-201ENST00000321110 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
RTL3-201ENST00000321110 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
RTL3-201ENST00000321110 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
RTL3-201ENST00000321110 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
RTL3-201ENST00000321110 LCE2BO14633 110 aa3.78□□□□□ -1.8
RTL3-201ENST00000321110 Q5VSD8 79 aa3.78□□□□□ -1.8
RTL3-201ENST00000321110 RYR1P21817 5038 aa3.78□□□□□ -1.8
RTL3-201ENST00000321110 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
RTL3-201ENST00000321110 TNXBP22105 4242 aa3.77□□□□□ -1.81
RTL3-201ENST00000321110 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
RTL3-201ENST00000321110 KRTAP4-5Q9BYR2 181 aa3.73□□□□□ -1.81
RTL3-201ENST00000321110 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
RTL3-201ENST00000321110 R4GN34 69 aa3.7□□□□□ -1.82
RTL3-201ENST00000321110 LPAP08519 4548 aa3.69□□□□□ -1.82
RTL3-201ENST00000321110 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
RTL3-201ENST00000321110 ABCA13Q86UQ4 5058 aa3.67□□□□□ -1.82
RTL3-201ENST00000321110 LORP23490 312 aaPredicted RBP3.67□□□□□ -1.82
RTL3-201ENST00000321110 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
RTL3-201ENST00000321110 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
RTL3-201ENST00000321110 HERC2O95714 4834 aa3.64□□□□□ -1.83
RTL3-201ENST00000321110 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
RTL3-201ENST00000321110 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
RTL3-201ENST00000321110 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
RTL3-201ENST00000321110 LRP2P98164 4655 aa3.58□□□□□ -1.84
RTL3-201ENST00000321110 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
RTL3-201ENST00000321110 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
RTL3-201ENST00000321110 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
RTL3-201ENST00000321110 INE1O15225 51 aa3.48□□□□□ -1.85
RTL3-201ENST00000321110 TNP1P09430 55 aa3.45□□□□□ -1.86
RTL3-201ENST00000321110 HERC1Q15751 4861 aa3.45□□□□□ -1.86
RTL3-201ENST00000321110 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
RTL3-201ENST00000321110 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
RTL3-201ENST00000321110 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
RTL3-201ENST00000321110 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
RTL3-201ENST00000321110 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
RTL3-201ENST00000321110 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
RTL3-201ENST00000321110 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
RTL3-201ENST00000321110 MUC2Q02817 5179 aa3.24□□□□□ -1.89
RTL3-201ENST00000321110 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
RTL3-201ENST00000321110 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
RTL3-201ENST00000321110 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
RTL3-201ENST00000321110 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
RTL3-201ENST00000321110 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
RTL3-201ENST00000321110 KRTAP19-1Q8IUB9 90 aa3.14□□□□□ -1.91
RTL3-201ENST00000321110 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
RTL3-201ENST00000321110 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
RTL3-201ENST00000321110 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
RTL3-201ENST00000321110 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
RTL3-201ENST00000321110 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
RTL3-201ENST00000321110 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
RTL3-201ENST00000321110 KRTAP9-6A0A140TA67 174 aa3.07□□□□□ -1.92
RTL3-201ENST00000321110 M0R2T5 61 aa3.07□□□□□ -1.92
RTL3-201ENST00000321110 KRTAP10-10P60014 251 aa3.05□□□□□ -1.92
RTL3-201ENST00000321110 MT1HP80294 61 aa3.04□□□□□ -1.92
RTL3-201ENST00000321110 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
RTL3-201ENST00000321110 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
RTL3-201ENST00000321110 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
RTL3-201ENST00000321110 MT1XP80297 61 aa2.99□□□□□ -1.93
RTL3-201ENST00000321110 MT1FP04733 61 aa2.98□□□□□ -1.93
RTL3-201ENST00000321110 MT2AP02795 61 aa2.98□□□□□ -1.93
RTL3-201ENST00000321110 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
RTL3-201ENST00000321110 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
RTL3-201ENST00000321110 MT1BP07438 61 aa2.93□□□□□ -1.94
RTL3-201ENST00000321110 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
RTL3-201ENST00000321110 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
RTL3-201ENST00000321110 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
RTL3-201ENST00000321110 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
RTL3-201ENST00000321110 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.94
RTL3-201ENST00000321110 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
RTL3-201ENST00000321110 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms