RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ROMO1P60602 79 aa5.61□□□□□ -1.51
TOP3A-201ENST00000321105 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
TOP3A-201ENST00000321105 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
TOP3A-201ENST00000321105 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
TOP3A-201ENST00000321105 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
TOP3A-201ENST00000321105 VPS13BQ7Z7G8 4022 aa5.59□□□□□ -1.51
TOP3A-201ENST00000321105 HYDINQ4G0P3 5121 aa5.59□□□□□ -1.52
TOP3A-201ENST00000321105 PKHD1P08F94 4074 aa5.55□□□□□ -1.52
TOP3A-201ENST00000321105 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
TOP3A-201ENST00000321105 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
TOP3A-201ENST00000321105 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
TOP3A-201ENST00000321105 RYR3Q15413 4870 aa5.52□□□□□ -1.53
TOP3A-201ENST00000321105 SACSQ9NZJ4 4579 aa5.5□□□□□ -1.53
TOP3A-201ENST00000321105 DYNC2H1Q8NCM8 4307 aaKnown RBP5.5□□□□□ -1.53
TOP3A-201ENST00000321105 KMT2CQ8NEZ4 4911 aaKnown RBP5.5□□□□□ -1.53
TOP3A-201ENST00000321105 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
TOP3A-201ENST00000321105 HECTD4Q9Y4D8 3996 aa5.45□□□□□ -1.54
TOP3A-201ENST00000321105 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
TOP3A-201ENST00000321105 H3BS24 57 aa5.41□□□□□ -1.54
TOP3A-201ENST00000321105 ALMS1Q8TCU4 4167 aa5.39□□□□□ -1.55
TOP3A-201ENST00000321105 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
TOP3A-201ENST00000321105 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
TOP3A-201ENST00000321105 FAT2Q9NYQ8 4349 aa5.36□□□□□ -1.55
TOP3A-201ENST00000321105 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
TOP3A-201ENST00000321105 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
TOP3A-201ENST00000321105 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
TOP3A-201ENST00000321105 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
TOP3A-201ENST00000321105 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
TOP3A-201ENST00000321105 KRTAP3-3Q9BYR6 98 aa5.3□□□□□ -1.56
TOP3A-201ENST00000321105 LRP2P98164 4655 aa5.29□□□□□ -1.56
TOP3A-201ENST00000321105 RYR2Q92736 4967 aa5.29□□□□□ -1.56
TOP3A-201ENST00000321105 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
TOP3A-201ENST00000321105 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
TOP3A-201ENST00000321105 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.57
TOP3A-201ENST00000321105 HERC2O95714 4834 aa5.21□□□□□ -1.58
TOP3A-201ENST00000321105 EPPK1P58107 5090 aaKnown RBP5.19□□□□□ -1.58
TOP3A-201ENST00000321105 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
TOP3A-201ENST00000321105 TNP1P09430 55 aa5.18□□□□□ -1.58
TOP3A-201ENST00000321105 PKD1P98161 4303 aa5.14□□□□□ -1.59
TOP3A-201ENST00000321105 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
TOP3A-201ENST00000321105 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
TOP3A-201ENST00000321105 HSPG2P98160 4391 aa5.11□□□□□ -1.59
TOP3A-201ENST00000321105 LPAP08519 4548 aa5.08□□□□□ -1.6
TOP3A-201ENST00000321105 PCLOQ9Y6V0 5065 aa5.01□□□□□ -1.61
TOP3A-201ENST00000321105 ABCA13Q86UQ4 5058 aa4.98□□□□□ -1.61
TOP3A-201ENST00000321105 MUC2Q02817 5179 aa4.96□□□□□ -1.61
TOP3A-201ENST00000321105 BIRC6Q9NR09 4857 aa4.93□□□□□ -1.62
TOP3A-201ENST00000321105 HERC1Q15751 4861 aa4.9□□□□□ -1.62
TOP3A-201ENST00000321105 PP632Q6XCG6 107 aa4.9□□□□□ -1.62
TOP3A-201ENST00000321105 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
TOP3A-201ENST00000321105 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
TOP3A-201ENST00000321105 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
TOP3A-201ENST00000321105 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
TOP3A-201ENST00000321105 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
TOP3A-201ENST00000321105 TNXBP22105 4242 aa4.79□□□□□ -1.64
TOP3A-201ENST00000321105 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
TOP3A-201ENST00000321105 MT1HP80294 61 aa4.72□□□□□ -1.65
TOP3A-201ENST00000321105 MT2AP02795 61 aa4.64□□□□□ -1.67
TOP3A-201ENST00000321105 MT1FP04733 61 aa4.64□□□□□ -1.67
TOP3A-201ENST00000321105 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
TOP3A-201ENST00000321105 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
TOP3A-201ENST00000321105 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
TOP3A-201ENST00000321105 LCE2DQ5TA82 110 aaPredicted RBP4.51□□□□□ -1.69
TOP3A-201ENST00000321105 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
TOP3A-201ENST00000321105 KRTAP19-1Q8IUB9 90 aa4.5□□□□□ -1.69
TOP3A-201ENST00000321105 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
TOP3A-201ENST00000321105 MUC17Q685J3 4493 aa4.49□□□□□ -1.69
TOP3A-201ENST00000321105 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
TOP3A-201ENST00000321105 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
TOP3A-201ENST00000321105 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
TOP3A-201ENST00000321105 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
TOP3A-201ENST00000321105 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
TOP3A-201ENST00000321105 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
TOP3A-201ENST00000321105 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
TOP3A-201ENST00000321105 USH2AO75445 5202 aa4.33□□□□□ -1.72
TOP3A-201ENST00000321105 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
TOP3A-201ENST00000321105 MT1BP07438 61 aa4.28□□□□□ -1.72
TOP3A-201ENST00000321105 MT1XP80297 61 aa4.25□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
TOP3A-201ENST00000321105 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.73
TOP3A-201ENST00000321105 LCE2BO14633 110 aa4.17□□□□□ -1.74
TOP3A-201ENST00000321105 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
TOP3A-201ENST00000321105 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
TOP3A-201ENST00000321105 KMT2DO14686 5537 aa4.12□□□□□ -1.75
TOP3A-201ENST00000321105 LCE2AQ5TA79 106 aaPredicted RBP4.09□□□□□ -1.75
TOP3A-201ENST00000321105 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
TOP3A-201ENST00000321105 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
TOP3A-201ENST00000321105 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
TOP3A-201ENST00000321105 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
TOP3A-201ENST00000321105 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
TOP3A-201ENST00000321105 MT1GP13640 62 aa3.85□□□□□ -1.79
TOP3A-201ENST00000321105 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
TOP3A-201ENST00000321105 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
TOP3A-201ENST00000321105 INE1O15225 51 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms