RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 C9orf92A6NGG3 77 aa8.68□□□□□ -1.02
CRAT-201ENST00000318080 A0A1B0GU33 70 aa8.67□□□□□ -1.02
CRAT-201ENST00000318080 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.03
CRAT-201ENST00000318080 MYCBP2O75592 4640 aa8.64□□□□□ -1.03
CRAT-201ENST00000318080 PKHD1L1Q86WI1 4243 aa8.63□□□□□ -1.03
CRAT-201ENST00000318080 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
CRAT-201ENST00000318080 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
CRAT-201ENST00000318080 Q5VSD8 79 aa8.58□□□□□ -1.04
CRAT-201ENST00000318080 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
CRAT-201ENST00000318080 C20orf166-AS1Q96NR2 134 aa8.5□□□□□ -1.05
CRAT-201ENST00000318080 KRTAP4-5Q9BYR2 181 aa8.5□□□□□ -1.05
CRAT-201ENST00000318080 BIRC6Q9NR09 4857 aa8.5□□□□□ -1.05
CRAT-201ENST00000318080 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
CRAT-201ENST00000318080 COX6B2Q6YFQ2 88 aa8.49□□□□□ -1.05
CRAT-201ENST00000318080 TNXBP22105 4242 aa8.49□□□□□ -1.05
CRAT-201ENST00000318080 ABCA13Q86UQ4 5058 aa8.48□□□□□ -1.05
CRAT-201ENST00000318080 A0A0D9SG42 100 aa8.47□□□□□ -1.05
CRAT-201ENST00000318080 RPS29P62273 56 aaKnown RBP8.46□□□□□ -1.06
CRAT-201ENST00000318080 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
CRAT-201ENST00000318080 HERC2O95714 4834 aa8.4□□□□□ -1.07
CRAT-201ENST00000318080 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
CRAT-201ENST00000318080 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
CRAT-201ENST00000318080 K7ERS5 55 aa8.38□□□□□ -1.07
CRAT-201ENST00000318080 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
CRAT-201ENST00000318080 LUZP6Q538Z0 58 aa8.28□□□□□ -1.08
CRAT-201ENST00000318080 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
CRAT-201ENST00000318080 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
CRAT-201ENST00000318080 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
CRAT-201ENST00000318080 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
CRAT-201ENST00000318080 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
CRAT-201ENST00000318080 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
CRAT-201ENST00000318080 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
CRAT-201ENST00000318080 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
CRAT-201ENST00000318080 HERC1Q15751 4861 aa8.11□□□□□ -1.11
CRAT-201ENST00000318080 LPAP08519 4548 aa8.1□□□□□ -1.11
CRAT-201ENST00000318080 S4R3F8 94 aa8.06□□□□□ -1.12
CRAT-201ENST00000318080 XP32Q5T750 250 aa8.03□□□□□ -1.12
CRAT-201ENST00000318080 SEC61BP60468 96 aaKnown RBP8.02□□□□□ -1.13
CRAT-201ENST00000318080 J3QL48 77 aa8□□□□□ -1.13
CRAT-201ENST00000318080 LRP2P98164 4655 aa7.99□□□□□ -1.13
CRAT-201ENST00000318080 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
CRAT-201ENST00000318080 HMCN2Q8NDA2 5059 aa7.83□□□□□ -1.16
CRAT-201ENST00000318080 MUC2Q02817 5179 aa7.74□□□□□ -1.17
CRAT-201ENST00000318080 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
CRAT-201ENST00000318080 M0QZ58 72 aa7.62□□□□□ -1.19
CRAT-201ENST00000318080 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
CRAT-201ENST00000318080 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
CRAT-201ENST00000318080 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
CRAT-201ENST00000318080 KRTAP4-1Q9BYQ7 146 aa7.56□□□□□ -1.2
CRAT-201ENST00000318080 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
CRAT-201ENST00000318080 R4GN34 69 aa7.5□□□□□ -1.21
CRAT-201ENST00000318080 FAT4Q6V0I7 4981 aa7.39□□□□□ -1.23
CRAT-201ENST00000318080 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
CRAT-201ENST00000318080 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
CRAT-201ENST00000318080 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
CRAT-201ENST00000318080 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
CRAT-201ENST00000318080 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
CRAT-201ENST00000318080 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
CRAT-201ENST00000318080 MT1HP80294 61 aa6.96□□□□□ -1.3
CRAT-201ENST00000318080 M0R2T5 61 aa6.89□□□□□ -1.31
CRAT-201ENST00000318080 TNP1P09430 55 aa6.86□□□□□ -1.31
CRAT-201ENST00000318080 SPRR5A0A1B0GTR4 108 aa6.78□□□□□ -1.32
CRAT-201ENST00000318080 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
CRAT-201ENST00000318080 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
CRAT-201ENST00000318080 MT2AP02795 61 aa6.68□□□□□ -1.34
CRAT-201ENST00000318080 MT1FP04733 61 aa6.68□□□□□ -1.34
CRAT-201ENST00000318080 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
CRAT-201ENST00000318080 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
CRAT-201ENST00000318080 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
CRAT-201ENST00000318080 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
CRAT-201ENST00000318080 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
CRAT-201ENST00000318080 INE1O15225 51 aa6.6□□□□□ -1.35
CRAT-201ENST00000318080 USH2AO75445 5202 aa6.49□□□□□ -1.37
CRAT-201ENST00000318080 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
CRAT-201ENST00000318080 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
CRAT-201ENST00000318080 LCE2BO14633 110 aa6.35□□□□□ -1.39
CRAT-201ENST00000318080 KRTAP8-1Q8IUC2 63 aa6.31□□□□□ -1.4
CRAT-201ENST00000318080 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
CRAT-201ENST00000318080 MT1XP80297 61 aa6.29□□□□□ -1.4
CRAT-201ENST00000318080 MT1BP07438 61 aa6.28□□□□□ -1.4
CRAT-201ENST00000318080 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
CRAT-201ENST00000318080 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
CRAT-201ENST00000318080 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
CRAT-201ENST00000318080 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
CRAT-201ENST00000318080 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
CRAT-201ENST00000318080 KMT2DO14686 5537 aa6.11□□□□□ -1.43
CRAT-201ENST00000318080 LCE2DQ5TA82 110 aaPredicted RBP5.98□□□□□ -1.45
CRAT-201ENST00000318080 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
CRAT-201ENST00000318080 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
CRAT-201ENST00000318080 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
CRAT-201ENST00000318080 LCE3CQ5T5A8 94 aa5.84□□□□□ -1.47
CRAT-201ENST00000318080 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
CRAT-201ENST00000318080 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
CRAT-201ENST00000318080 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
CRAT-201ENST00000318080 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CRAT-201ENST00000318080 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
CRAT-201ENST00000318080 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
CRAT-201ENST00000318080 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
CRAT-201ENST00000318080 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
CRAT-201ENST00000318080 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms