RNA–Protein interactions for RNA: ENST00000314583.7

HCLS1-201, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCLS1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-201ENST00000314583 SEC61GP60059 68 aa9.55□□□□□ -0.88
HCLS1-201ENST00000314583 A8MU10 97 aa9.54□□□□□ -0.88
HCLS1-201ENST00000314583 UQCR11O14957 56 aa9.48□□□□□ -0.89
HCLS1-201ENST00000314583 SPATA8Q6RVD6 105 aa9.43□□□□□ -0.9
HCLS1-201ENST00000314583 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
HCLS1-201ENST00000314583 LPAP08519 4548 aa9.38□□□□□ -0.91
HCLS1-201ENST00000314583 PMAIP1Q13794 54 aa9.38□□□□□ -0.91
HCLS1-201ENST00000314583 LRP2P98164 4655 aa9.37□□□□□ -0.91
HCLS1-201ENST00000314583 S4R3F8 94 aa9.37□□□□□ -0.91
HCLS1-201ENST00000314583 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
HCLS1-201ENST00000314583 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
HCLS1-201ENST00000314583 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
HCLS1-201ENST00000314583 SEC61BP60468 96 aaKnown RBP9.32□□□□□ -0.92
HCLS1-201ENST00000314583 A6NN06 94 aa9.27□□□□□ -0.92
HCLS1-201ENST00000314583 A0A1B0GU33 70 aa9.27□□□□□ -0.93
HCLS1-201ENST00000314583 PCLOQ9Y6V0 5065 aa9.2□□□□□ -0.94
HCLS1-201ENST00000314583 H0YAA0 97 aa9.18□□□□□ -0.94
HCLS1-201ENST00000314583 MUC17Q685J3 4493 aa9.17□□□□□ -0.94
HCLS1-201ENST00000314583 KRTAP4-1Q9BYQ7 146 aa9.14□□□□□ -0.95
HCLS1-201ENST00000314583 KTN1-AS1Q86SY8 53 aa9.13□□□□□ -0.95
HCLS1-201ENST00000314583 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
HCLS1-201ENST00000314583 CSAG1Q6PB30 78 aa9.1□□□□□ -0.95
HCLS1-201ENST00000314583 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
HCLS1-201ENST00000314583 HMCN2Q8NDA2 5059 aa9.05□□□□□ -0.96
HCLS1-201ENST00000314583 HERC1Q15751 4861 aa9.03□□□□□ -0.96
HCLS1-201ENST00000314583 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
HCLS1-201ENST00000314583 P0C880 135 aa8.97□□□□□ -0.97
HCLS1-201ENST00000314583 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
HCLS1-201ENST00000314583 K7ERS5 55 aa8.93□□□□□ -0.98
HCLS1-201ENST00000314583 KRTAP13-4Q3LI77 160 aa8.92□□□□□ -0.98
HCLS1-201ENST00000314583 M0QZ58 72 aa8.83□□□□□ -1
HCLS1-201ENST00000314583 A0A0D9SG42 100 aa8.8□□□□□ -1
HCLS1-201ENST00000314583 PRAC1Q96KF2 57 aa8.72□□□□□ -1.01
HCLS1-201ENST00000314583 MUC2Q02817 5179 aa8.65□□□□□ -1.02
HCLS1-201ENST00000314583 R4GN34 69 aa8.64□□□□□ -1.03
HCLS1-201ENST00000314583 LCE2CQ5TA81 110 aa8.64□□□□□ -1.03
HCLS1-201ENST00000314583 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
HCLS1-201ENST00000314583 KRTAP12-1P59990 96 aa8.62□□□□□ -1.03
HCLS1-201ENST00000314583 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
HCLS1-201ENST00000314583 ROMO1P60602 79 aa8.6□□□□□ -1.03
HCLS1-201ENST00000314583 SPINT4Q6UDR6 99 aa8.57□□□□□ -1.04
HCLS1-201ENST00000314583 RNF213Q63HN8 5207 aa8.57□□□□□ -1.04
HCLS1-201ENST00000314583 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
HCLS1-201ENST00000314583 UBR4Q5T4S7 5183 aa8.52□□□□□ -1.05
HCLS1-201ENST00000314583 LINC01554Q52M75 96 aa8.49□□□□□ -1.05
HCLS1-201ENST00000314583 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.06
HCLS1-201ENST00000314583 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
HCLS1-201ENST00000314583 MT1HP80294 61 aa8.42□□□□□ -1.06
HCLS1-201ENST00000314583 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
HCLS1-201ENST00000314583 M0R2T5 61 aa8.29□□□□□ -1.08
HCLS1-201ENST00000314583 KRTAP9-8Q9BYQ0 159 aa8.16□□□□□ -1.1
HCLS1-201ENST00000314583 MT2AP02795 61 aa8.15□□□□□ -1.11
HCLS1-201ENST00000314583 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.11
HCLS1-201ENST00000314583 SPRR2GQ9BYE4 73 aa8.14□□□□□ -1.11
HCLS1-201ENST00000314583 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
HCLS1-201ENST00000314583 MT1FP04733 61 aa8.11□□□□□ -1.11
HCLS1-201ENST00000314583 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
HCLS1-201ENST00000314583 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
HCLS1-201ENST00000314583 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
HCLS1-201ENST00000314583 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
HCLS1-201ENST00000314583 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
HCLS1-201ENST00000314583 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
HCLS1-201ENST00000314583 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
HCLS1-201ENST00000314583 TNP1P09430 55 aa7.84□□□□□ -1.15
HCLS1-201ENST00000314583 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
HCLS1-201ENST00000314583 MT1BP07438 61 aa7.74□□□□□ -1.17
HCLS1-201ENST00000314583 LCE2BO14633 110 aa7.6□□□□□ -1.19
HCLS1-201ENST00000314583 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
HCLS1-201ENST00000314583 MT1XP80297 61 aa7.55□□□□□ -1.2
HCLS1-201ENST00000314583 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
HCLS1-201ENST00000314583 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
HCLS1-201ENST00000314583 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
HCLS1-201ENST00000314583 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
HCLS1-201ENST00000314583 USH2AO75445 5202 aa7.3□□□□□ -1.24
HCLS1-201ENST00000314583 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
HCLS1-201ENST00000314583 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
HCLS1-201ENST00000314583 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
HCLS1-201ENST00000314583 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
HCLS1-201ENST00000314583 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
HCLS1-201ENST00000314583 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
HCLS1-201ENST00000314583 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
HCLS1-201ENST00000314583 SSPOA2VEC9 5147 aa7.08□□□□□ -1.28
HCLS1-201ENST00000314583 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
HCLS1-201ENST00000314583 H3BS24 57 aa6.94□□□□□ -1.3
HCLS1-201ENST00000314583 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
HCLS1-201ENST00000314583 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
HCLS1-201ENST00000314583 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
HCLS1-201ENST00000314583 KMT2DO14686 5537 aa6.74□□□□□ -1.33
HCLS1-201ENST00000314583 FSIP2Q5CZC0 6907 aa6.73□□□□□ -1.33
HCLS1-201ENST00000314583 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
HCLS1-201ENST00000314583 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.33
HCLS1-201ENST00000314583 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
HCLS1-201ENST00000314583 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
HCLS1-201ENST00000314583 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
HCLS1-201ENST00000314583 MT1EP04732 61 aa6.59□□□□□ -1.35
HCLS1-201ENST00000314583 MT1LQ93083 61 aa6.52□□□□□ -1.37
HCLS1-201ENST00000314583 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
HCLS1-201ENST00000314583 A0A0A0MQY5 61 aa6.42□□□□□ -1.38
HCLS1-201ENST00000314583 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
HCLS1-201ENST00000314583 KRTAP9-6A8MVA2 160 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 836.7 ms