RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 K7ERU9 68 aa8.34□□□□□ -1.07
RPA2-201ENST00000313433 MP68P56378 58 aa8.31□□□□□ -1.08
RPA2-201ENST00000313433 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
RPA2-201ENST00000313433 FAM236AA0A1B0GUQ0 79 aa8.27□□□□□ -1.09
RPA2-201ENST00000313433 FAM236BA0A1B0GV22 79 aa8.27□□□□□ -1.09
RPA2-201ENST00000313433 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
RPA2-201ENST00000313433 MACF1Q9UPN3 7388 aaKnown RBP8.26□□□□□ -1.09
RPA2-201ENST00000313433 MT1BP07438 61 aa8.26□□□□□ -1.09
RPA2-201ENST00000313433 SPRR2GQ9BYE4 73 aa8.25□□□□□ -1.09
RPA2-201ENST00000313433 H3BPC8 53 aa8.23□□□□□ -1.09
RPA2-201ENST00000313433 KRTAP19-8Q3LI54 63 aa8.22□□□□□ -1.09
RPA2-201ENST00000313433 A8MUN3 132 aa8.21□□□□□ -1.1
RPA2-201ENST00000313433 TRAV7A0A075B6U4 112 aa8.16□□□□□ -1.1
RPA2-201ENST00000313433 NDUFC1O43677 76 aa8.15□□□□□ -1.1
RPA2-201ENST00000313433 DMAC1Q96GE9 116 aa8.15□□□□□ -1.1
RPA2-201ENST00000313433 Q5VV11 94 aa8.12□□□□□ -1.11
RPA2-201ENST00000313433 H0YAA0 97 aa8.1□□□□□ -1.11
RPA2-201ENST00000313433 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
RPA2-201ENST00000313433 SMIM20Q8N5G0 67 aa8.07□□□□□ -1.12
RPA2-201ENST00000313433 ADM2Q7Z4H4 148 aa8.04□□□□□ -1.12
RPA2-201ENST00000313433 SVIPQ8NHG7 77 aa8.03□□□□□ -1.12
RPA2-201ENST00000313433 SNURFQ9Y675 71 aa8.03□□□□□ -1.12
RPA2-201ENST00000313433 A6NN06 94 aa8.01□□□□□ -1.13
RPA2-201ENST00000313433 KRTAP10-5P60370 271 aa8.01□□□□□ -1.13
RPA2-201ENST00000313433 CRIPTQ9P021 101 aa8□□□□□ -1.13
RPA2-201ENST00000313433 KRTAP6-3Q3LI67 103 aa7.99□□□□□ -1.13
RPA2-201ENST00000313433 KRTAP3-2Q9BYR7 98 aa7.98□□□□□ -1.13
RPA2-201ENST00000313433 P0C880 135 aa7.97□□□□□ -1.13
RPA2-201ENST00000313433 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
RPA2-201ENST00000313433 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
RPA2-201ENST00000313433 ACYP2P14621 99 aa7.89□□□□□ -1.15
RPA2-201ENST00000313433 SPANXA2-OT1Q8N9U9 137 aa7.82□□□□□ -1.16
RPA2-201ENST00000313433 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
RPA2-201ENST00000313433 COX7CP15954 63 aa7.76□□□□□ -1.17
RPA2-201ENST00000313433 M0QZ58 72 aa7.74□□□□□ -1.17
RPA2-201ENST00000313433 MT1XP80297 61 aa7.74□□□□□ -1.17
RPA2-201ENST00000313433 R4GN34 69 aa7.74□□□□□ -1.17
RPA2-201ENST00000313433 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.18
RPA2-201ENST00000313433 KRTAP5-9P26371 169 aa7.69□□□□□ -1.18
RPA2-201ENST00000313433 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
RPA2-201ENST00000313433 H7BZZ5 65 aa7.66□□□□□ -1.18
RPA2-201ENST00000313433 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.18
RPA2-201ENST00000313433 COA5Q86WW8 74 aa7.64□□□□□ -1.19
RPA2-201ENST00000313433 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
RPA2-201ENST00000313433 NEBP20929 6669 aa7.61□□□□□ -1.19
RPA2-201ENST00000313433 PLAC4Q8WY50 150 aa7.6□□□□□ -1.19
RPA2-201ENST00000313433 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
RPA2-201ENST00000313433 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
RPA2-201ENST00000313433 KMT2DO14686 5537 aa7.57□□□□□ -1.2
RPA2-201ENST00000313433 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
RPA2-201ENST00000313433 CCDC179H3BU77 68 aa7.52□□□□□ -1.21
RPA2-201ENST00000313433 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
RPA2-201ENST00000313433 MDN1Q9NU22 5596 aa7.43□□□□□ -1.22
RPA2-201ENST00000313433 SPRR2FQ96RM1 72 aa7.42□□□□□ -1.22
RPA2-201ENST00000313433 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
RPA2-201ENST00000313433 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.22
RPA2-201ENST00000313433 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
RPA2-201ENST00000313433 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
RPA2-201ENST00000313433 KRTAP20-1Q3LI63 56 aa7.36□□□□□ -1.23
RPA2-201ENST00000313433 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
RPA2-201ENST00000313433 SPRR2EP22531 72 aa7.3□□□□□ -1.24
RPA2-201ENST00000313433 SPRR2BP35325 72 aa7.3□□□□□ -1.24
RPA2-201ENST00000313433 SPRR2AP35326 72 aa7.3□□□□□ -1.24
RPA2-201ENST00000313433 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
RPA2-201ENST00000313433 LCE1AQ5T7P2 110 aa7.27□□□□□ -1.25
RPA2-201ENST00000313433 SERP1Q9Y6X1 66 aa7.27□□□□□ -1.25
RPA2-201ENST00000313433 A0A1B0GU33 70 aa7.25□□□□□ -1.25
RPA2-201ENST00000313433 SEC61GP60059 68 aa7.25□□□□□ -1.25
RPA2-201ENST00000313433 A0A0D9SG42 100 aa7.24□□□□□ -1.25
RPA2-201ENST00000313433 ATP5EP56381 51 aaPredicted RBP7.18□□□□□ -1.26
RPA2-201ENST00000313433 KRTAP2-3P0C7H8 128 aa7.17□□□□□ -1.26
RPA2-201ENST00000313433 KRTAP2-4Q9BYR9 128 aa7.17□□□□□ -1.26
RPA2-201ENST00000313433 A0A1B0GU69 56 aa7.16□□□□□ -1.26
RPA2-201ENST00000313433 KRTAP12-1P59990 96 aa7.15□□□□□ -1.26
RPA2-201ENST00000313433 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
RPA2-201ENST00000313433 TMEM258P61165 79 aa7.11□□□□□ -1.27
RPA2-201ENST00000313433 A8MU10 97 aa7.1□□□□□ -1.27
RPA2-201ENST00000313433 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
RPA2-201ENST00000313433 SPRR2DP22532 72 aa7.04□□□□□ -1.28
RPA2-201ENST00000313433 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
RPA2-201ENST00000313433 SMIM26A0A096LP01 95 aa6.97□□□□□ -1.29
RPA2-201ENST00000313433 KRTAP2-2Q9BYT5 123 aa6.94□□□□□ -1.3
RPA2-201ENST00000313433 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
RPA2-201ENST00000313433 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
RPA2-201ENST00000313433 PRR15LQ9BU68 103 aa6.91□□□□□ -1.3
RPA2-201ENST00000313433 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
RPA2-201ENST00000313433 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
RPA2-201ENST00000313433 MT1EP04732 61 aa6.84□□□□□ -1.31
RPA2-201ENST00000313433 PCP4P48539 62 aa6.79□□□□□ -1.32
RPA2-201ENST00000313433 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
RPA2-201ENST00000313433 UQCR11O14957 56 aa6.75□□□□□ -1.33
RPA2-201ENST00000313433 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
RPA2-201ENST00000313433 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
RPA2-201ENST00000313433 PSPHP1O15172 72 aa6.7□□□□□ -1.34
RPA2-201ENST00000313433 Q1T7F1 81 aa6.69□□□□□ -1.34
RPA2-201ENST00000313433 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
RPA2-201ENST00000313433 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
RPA2-201ENST00000313433 TNP1P09430 55 aa6.63□□□□□ -1.35
RPA2-201ENST00000313433 V9GYY9 64 aa6.59□□□□□ -1.35
RPA2-201ENST00000313433 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms