RNA–Protein interactions for RNA: ENST00000312960.3

SIAH2-201, Transcript of siah E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIAH2, Length 2,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2-201ENST00000312960 H0YAA0 97 aa11.82□□□□□ -0.52
SIAH2-201ENST00000312960 A0A1B0GU33 70 aa11.8□□□□□ -0.52
SIAH2-201ENST00000312960 DMBT1Q9UGM3 2413 aaPredicted RBP11.79□□□□□ -0.52
SIAH2-201ENST00000312960 XP32Q5T750 250 aa11.79□□□□□ -0.52
SIAH2-201ENST00000312960 ADM2Q7Z4H4 148 aa11.77□□□□□ -0.53
SIAH2-201ENST00000312960 H1FX-AS1Q4G0G2 97 aa11.77□□□□□ -0.53
SIAH2-201ENST00000312960 PRAC1Q96KF2 57 aa11.76□□□□□ -0.53
SIAH2-201ENST00000312960 MT1HL1P0DM35 61 aa11.74□□□□□ -0.53
SIAH2-201ENST00000312960 KRTAP4-5Q9BYR2 181 aa11.73□□□□□ -0.53
SIAH2-201ENST00000312960 KRTAP3-3Q9BYR6 98 aa11.65□□□□□ -0.54
SIAH2-201ENST00000312960 KRTAP10-6P60371 365 aaPredicted RBP11.52□□□□□ -0.56
SIAH2-201ENST00000312960 S4R3F8 94 aa11.52□□□□□ -0.56
SIAH2-201ENST00000312960 BIRC6Q9NR09 4857 aa11.52□□□□□ -0.57
SIAH2-201ENST00000312960 ABCA13Q86UQ4 5058 aa11.49□□□□□ -0.57
SIAH2-201ENST00000312960 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.58
SIAH2-201ENST00000312960 HERC2O95714 4834 aa11.46□□□□□ -0.58
SIAH2-201ENST00000312960 CSAG1Q6PB30 78 aa11.45□□□□□ -0.58
SIAH2-201ENST00000312960 TPRXLQ17RH7 258 aa11.4□□□□□ -0.58
SIAH2-201ENST00000312960 K7ERS5 55 aa11.36□□□□□ -0.59
SIAH2-201ENST00000312960 LPAP08519 4548 aa11.36□□□□□ -0.59
SIAH2-201ENST00000312960 KRTAP13-4Q3LI77 160 aa11.36□□□□□ -0.59
SIAH2-201ENST00000312960 LINC01554Q52M75 96 aa11.35□□□□□ -0.59
SIAH2-201ENST00000312960 LRP2P98164 4655 aa11.34□□□□□ -0.59
SIAH2-201ENST00000312960 P0C880 135 aa11.28□□□□□ -0.6
SIAH2-201ENST00000312960 A0A0D9SG42 100 aa11.2□□□□□ -0.62
SIAH2-201ENST00000312960 J3QL48 77 aa11.2□□□□□ -0.62
SIAH2-201ENST00000312960 KRTAP25-1Q3LHN0 102 aa11.19□□□□□ -0.62
SIAH2-201ENST00000312960 ROMO1P60602 79 aa11.11□□□□□ -0.63
SIAH2-201ENST00000312960 CRIPTQ9P021 101 aa11.01□□□□□ -0.65
SIAH2-201ENST00000312960 PCLOQ9Y6V0 5065 aa10.99□□□□□ -0.65
SIAH2-201ENST00000312960 KRTAP12-2P59991 146 aa10.97□□□□□ -0.65
SIAH2-201ENST00000312960 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.66
SIAH2-201ENST00000312960 M0QZ58 72 aa10.95□□□□□ -0.66
SIAH2-201ENST00000312960 MUC17Q685J3 4493 aa10.93□□□□□ -0.66
SIAH2-201ENST00000312960 KRTAP12-1P59990 96 aa10.92□□□□□ -0.66
SIAH2-201ENST00000312960 H3BS24 57 aa10.89□□□□□ -0.67
SIAH2-201ENST00000312960 HERC1Q15751 4861 aa10.88□□□□□ -0.67
SIAH2-201ENST00000312960 SPINT4Q6UDR6 99 aa10.85□□□□□ -0.67
SIAH2-201ENST00000312960 KRTAP4-1Q9BYQ7 146 aa10.83□□□□□ -0.68
SIAH2-201ENST00000312960 HMCN2Q8NDA2 5059 aa10.72□□□□□ -0.69
SIAH2-201ENST00000312960 KRTAP19-2Q3LHN2 52 aa10.67□□□□□ -0.7
SIAH2-201ENST00000312960 C10orf95Q9H7T3 257 aa10.67□□□□□ -0.7
SIAH2-201ENST00000312960 R4GN34 69 aa10.67□□□□□ -0.7
SIAH2-201ENST00000312960 LORP23490 312 aaPredicted RBP10.59□□□□□ -0.71
SIAH2-201ENST00000312960 MUC2Q02817 5179 aa10.51□□□□□ -0.73
SIAH2-201ENST00000312960 FLGP20930 4061 aaPredicted RBP10.41□□□□□ -0.74
SIAH2-201ENST00000312960 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
SIAH2-201ENST00000312960 KRTAP15-1Q3LI76 137 aa10.19□□□□□ -0.78
SIAH2-201ENST00000312960 RNF213Q63HN8 5207 aa10.18□□□□□ -0.78
SIAH2-201ENST00000312960 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
SIAH2-201ENST00000312960 CAMK2N1Q7Z7J9 78 aa10.1□□□□□ -0.79
SIAH2-201ENST00000312960 FAT4Q6V0I7 4981 aa10.07□□□□□ -0.8
SIAH2-201ENST00000312960 PP632Q6XCG6 107 aa9.9□□□□□ -0.82
SIAH2-201ENST00000312960 MT1HP80294 61 aa9.86□□□□□ -0.83
SIAH2-201ENST00000312960 NDUFAF8A1L188 74 aa9.82□□□□□ -0.84
SIAH2-201ENST00000312960 PLAC4Q8WY50 150 aa9.81□□□□□ -0.84
SIAH2-201ENST00000312960 SPRR2GQ9BYE4 73 aa9.81□□□□□ -0.84
SIAH2-201ENST00000312960 KRTAP19-1Q8IUB9 90 aa9.75□□□□□ -0.85
SIAH2-201ENST00000312960 M0R2T5 61 aa9.74□□□□□ -0.85
SIAH2-201ENST00000312960 TNP1P09430 55 aa9.74□□□□□ -0.85
SIAH2-201ENST00000312960 KRTAP23-1A1A580 65 aa9.65□□□□□ -0.86
SIAH2-201ENST00000312960 MT2AP02795 61 aa9.59□□□□□ -0.87
SIAH2-201ENST00000312960 MT1FP04733 61 aa9.58□□□□□ -0.88
SIAH2-201ENST00000312960 KRTAP9-8Q9BYQ0 159 aa9.56□□□□□ -0.88
SIAH2-201ENST00000312960 KRTAP10-10P60014 251 aa9.54□□□□□ -0.88
SIAH2-201ENST00000312960 KRTAP19-8Q3LI54 63 aa9.4□□□□□ -0.91
SIAH2-201ENST00000312960 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
SIAH2-201ENST00000312960 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
SIAH2-201ENST00000312960 MT1BP07438 61 aa9.26□□□□□ -0.93
SIAH2-201ENST00000312960 LCE3AQ5TA76 89 aa9.24□□□□□ -0.93
SIAH2-201ENST00000312960 SPRR5A0A1B0GTR4 108 aa9.21□□□□□ -0.94
SIAH2-201ENST00000312960 KRTAP9-3Q9BYQ3 159 aa9.19□□□□□ -0.94
SIAH2-201ENST00000312960 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
SIAH2-201ENST00000312960 MT1XP80297 61 aa9.16□□□□□ -0.94
SIAH2-201ENST00000312960 A0A0A0MQY5 61 aa9.06□□□□□ -0.96
SIAH2-201ENST00000312960 KRTAP8-1Q8IUC2 63 aa9.05□□□□□ -0.96
SIAH2-201ENST00000312960 LCE2BO14633 110 aa8.93□□□□□ -0.98
SIAH2-201ENST00000312960 KRTAP10-12P60413 245 aa8.92□□□□□ -0.98
SIAH2-201ENST00000312960 KRTAP10-7P60409 375 aaPredicted RBP8.88□□□□□ -0.99
SIAH2-201ENST00000312960 PRO2289Q9P1D8 64 aa8.83□□□□□ -1
SIAH2-201ENST00000312960 KRTAP12-3P60328 96 aa8.82□□□□□ -1
SIAH2-201ENST00000312960 USH2AO75445 5202 aa8.72□□□□□ -1.01
SIAH2-201ENST00000312960 KRTAP19-5Q3LI72 72 aa8.49□□□□□ -1.05
SIAH2-201ENST00000312960 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
SIAH2-201ENST00000312960 KMT2DO14686 5537 aa8.36□□□□□ -1.07
SIAH2-201ENST00000312960 KRTAP4-8A0A0G2JLE6 195 aa8.35□□□□□ -1.07
SIAH2-201ENST00000312960 KRTAP4-8Q9BYQ9 185 aa8.35□□□□□ -1.07
SIAH2-201ENST00000312960 FSIP2Q5CZC0 6907 aa8.32□□□□□ -1.08
SIAH2-201ENST00000312960 LCE3CQ5T5A8 94 aa8.31□□□□□ -1.08
SIAH2-201ENST00000312960 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
SIAH2-201ENST00000312960 KRTAP19-6Q3LI70 58 aa8.24□□□□□ -1.09
SIAH2-201ENST00000312960 KRTAP19-7Q3SYF9 63 aa8.18□□□□□ -1.1
SIAH2-201ENST00000312960 KRTAP9-6A8MVA2 160 aa7.99□□□□□ -1.13
SIAH2-201ENST00000312960 FCGBPQ9Y6R7 5405 aaPredicted RBP7.98□□□□□ -1.13
SIAH2-201ENST00000312960 INE1O15225 51 aa7.96□□□□□ -1.13
SIAH2-201ENST00000312960 KRTAP19-4Q3LI73 84 aa7.96□□□□□ -1.13
SIAH2-201ENST00000312960 MT1EP04732 61 aa7.94□□□□□ -1.14
SIAH2-201ENST00000312960 KRTAP9-2Q9BYQ4 174 aa7.93□□□□□ -1.14
SIAH2-201ENST00000312960 KRTAP4-7Q9BYR0 210 aa7.92□□□□□ -1.14
SIAH2-201ENST00000312960 MT1LQ93083 61 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms