RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 SPATA8Q6RVD6 105 aa11.79□□□□□ -0.52
CTSF-201ENST00000310325 BIRC6Q9NR09 4857 aa11.78□□□□□ -0.52
CTSF-201ENST00000310325 MIR22HGQ0VDD5 57 aa11.76□□□□□ -0.53
CTSF-201ENST00000310325 A6NN06 94 aa11.69□□□□□ -0.54
CTSF-201ENST00000310325 HERC2O95714 4834 aa11.64□□□□□ -0.55
CTSF-201ENST00000310325 ABCA13Q86UQ4 5058 aa11.63□□□□□ -0.55
CTSF-201ENST00000310325 LRP2P98164 4655 aa11.61□□□□□ -0.55
CTSF-201ENST00000310325 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
CTSF-201ENST00000310325 S4R3F8 94 aa11.59□□□□□ -0.55
CTSF-201ENST00000310325 A0A1B0GU33 70 aa11.56□□□□□ -0.56
CTSF-201ENST00000310325 LPAP08519 4548 aa11.56□□□□□ -0.56
CTSF-201ENST00000310325 J3QL48 77 aa11.54□□□□□ -0.56
CTSF-201ENST00000310325 H1FX-AS1Q4G0G2 97 aa11.54□□□□□ -0.56
CTSF-201ENST00000310325 KTN1-AS1Q86SY8 53 aa11.51□□□□□ -0.57
CTSF-201ENST00000310325 H0YAA0 97 aa11.5□□□□□ -0.57
CTSF-201ENST00000310325 RBM12B-AS1Q9P1G2 102 aa11.47□□□□□ -0.57
CTSF-201ENST00000310325 SEC61BP60468 96 aaKnown RBP11.4□□□□□ -0.58
CTSF-201ENST00000310325 KRTAP10-6P60371 365 aaPredicted RBP11.38□□□□□ -0.59
CTSF-201ENST00000310325 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
CTSF-201ENST00000310325 PCLOQ9Y6V0 5065 aa11.25□□□□□ -0.61
CTSF-201ENST00000310325 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
CTSF-201ENST00000310325 MUC17Q685J3 4493 aa11.21□□□□□ -0.61
CTSF-201ENST00000310325 P0C880 135 aa11.21□□□□□ -0.62
CTSF-201ENST00000310325 KRTAP4-1Q9BYQ7 146 aa11.18□□□□□ -0.62
CTSF-201ENST00000310325 KRTAP13-4Q3LI77 160 aa11.18□□□□□ -0.62
CTSF-201ENST00000310325 ADM2Q7Z4H4 148 aa11.17□□□□□ -0.62
CTSF-201ENST00000310325 K7ERS5 55 aa11.09□□□□□ -0.63
CTSF-201ENST00000310325 PRAC1Q96KF2 57 aa11.08□□□□□ -0.64
CTSF-201ENST00000310325 A0A0D9SG42 100 aa11.02□□□□□ -0.64
CTSF-201ENST00000310325 HERC1Q15751 4861 aa11.01□□□□□ -0.65
CTSF-201ENST00000310325 KRTAP19-2Q3LHN2 52 aa10.96□□□□□ -0.65
CTSF-201ENST00000310325 M0QZ58 72 aa10.91□□□□□ -0.66
CTSF-201ENST00000310325 HMCN2Q8NDA2 5059 aa10.82□□□□□ -0.68
CTSF-201ENST00000310325 KRTAP12-2P59991 146 aa10.78□□□□□ -0.68
CTSF-201ENST00000310325 KRTAP12-1P59990 96 aa10.75□□□□□ -0.69
CTSF-201ENST00000310325 ROMO1P60602 79 aa10.75□□□□□ -0.69
CTSF-201ENST00000310325 R4GN34 69 aa10.72□□□□□ -0.69
CTSF-201ENST00000310325 SPINT4Q6UDR6 99 aa10.71□□□□□ -0.69
CTSF-201ENST00000310325 MUC2Q02817 5179 aa10.7□□□□□ -0.7
CTSF-201ENST00000310325 FLGP20930 4061 aaPredicted RBP10.67□□□□□ -0.7
CTSF-201ENST00000310325 LORP23490 312 aaPredicted RBP10.64□□□□□ -0.71
CTSF-201ENST00000310325 KRTAP25-1Q3LHN0 102 aa10.63□□□□□ -0.71
CTSF-201ENST00000310325 LINC01554Q52M75 96 aa10.6□□□□□ -0.71
CTSF-201ENST00000310325 CRIPTQ9P021 101 aa10.54□□□□□ -0.72
CTSF-201ENST00000310325 LCE2CQ5TA81 110 aa10.47□□□□□ -0.73
CTSF-201ENST00000310325 UBR4Q5T4S7 5183 aa10.34□□□□□ -0.75
CTSF-201ENST00000310325 RNF213Q63HN8 5207 aa10.32□□□□□ -0.76
CTSF-201ENST00000310325 C10orf95Q9H7T3 257 aa10.28□□□□□ -0.76
CTSF-201ENST00000310325 FAT4Q6V0I7 4981 aa10.24□□□□□ -0.77
CTSF-201ENST00000310325 MT1HP80294 61 aa10.22□□□□□ -0.77
CTSF-201ENST00000310325 M0R2T5 61 aa10.19□□□□□ -0.78
CTSF-201ENST00000310325 CAMK2N1Q7Z7J9 78 aa10.12□□□□□ -0.79
CTSF-201ENST00000310325 SPRR2GQ9BYE4 73 aa10.02□□□□□ -0.8
CTSF-201ENST00000310325 KRTAP19-1Q8IUB9 90 aa9.97□□□□□ -0.81
CTSF-201ENST00000310325 MT2AP02795 61 aa9.96□□□□□ -0.81
CTSF-201ENST00000310325 MT1FP04733 61 aa9.93□□□□□ -0.82
CTSF-201ENST00000310325 KRTAP9-8Q9BYQ0 159 aa9.92□□□□□ -0.82
CTSF-201ENST00000310325 KRTAP10-10P60014 251 aa9.91□□□□□ -0.82
CTSF-201ENST00000310325 PLAC4Q8WY50 150 aa9.83□□□□□ -0.84
CTSF-201ENST00000310325 PP632Q6XCG6 107 aa9.72□□□□□ -0.85
CTSF-201ENST00000310325 TNP1P09430 55 aa9.7□□□□□ -0.86
CTSF-201ENST00000310325 KRTAP19-8Q3LI54 63 aa9.66□□□□□ -0.86
CTSF-201ENST00000310325 KRTAP15-1Q3LI76 137 aa9.57□□□□□ -0.88
CTSF-201ENST00000310325 KRTAP23-1A1A580 65 aa9.54□□□□□ -0.88
CTSF-201ENST00000310325 KRTAP9-3Q9BYQ3 159 aa9.53□□□□□ -0.88
CTSF-201ENST00000310325 MT1BP07438 61 aa9.52□□□□□ -0.89
CTSF-201ENST00000310325 LCE2AQ5TA79 106 aaPredicted RBP9.48□□□□□ -0.89
CTSF-201ENST00000310325 KRTAP10-5P60370 271 aa9.34□□□□□ -0.91
CTSF-201ENST00000310325 MT1XP80297 61 aa9.34□□□□□ -0.91
CTSF-201ENST00000310325 LCE3AQ5TA76 89 aa9.22□□□□□ -0.93
CTSF-201ENST00000310325 LCE2BO14633 110 aa9.2□□□□□ -0.94
CTSF-201ENST00000310325 PRO2289Q9P1D8 64 aa9.13□□□□□ -0.95
CTSF-201ENST00000310325 NDUFAF8A1L188 74 aa9.11□□□□□ -0.95
CTSF-201ENST00000310325 KRTAP10-12P60413 245 aa9.05□□□□□ -0.96
CTSF-201ENST00000310325 KRTAP8-1Q8IUC2 63 aa9.03□□□□□ -0.96
CTSF-201ENST00000310325 KRTAP10-7P60409 375 aaPredicted RBP9.02□□□□□ -0.97
CTSF-201ENST00000310325 H3BS24 57 aa8.95□□□□□ -0.98
CTSF-201ENST00000310325 SPRR5A0A1B0GTR4 108 aa8.87□□□□□ -0.99
CTSF-201ENST00000310325 LUZP6Q538Z0 58 aa8.85□□□□□ -0.99
CTSF-201ENST00000310325 USH2AO75445 5202 aa8.84□□□□□ -0.99
CTSF-201ENST00000310325 KRTAP12-3P60328 96 aa8.81□□□□□ -1
CTSF-201ENST00000310325 KRTAP19-5Q3LI72 72 aa8.58□□□□□ -1.04
CTSF-201ENST00000310325 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
CTSF-201ENST00000310325 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
CTSF-201ENST00000310325 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
CTSF-201ENST00000310325 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
CTSF-201ENST00000310325 FSIP2Q5CZC0 6907 aa8.48□□□□□ -1.05
CTSF-201ENST00000310325 KMT2DO14686 5537 aa8.48□□□□□ -1.05
CTSF-201ENST00000310325 KRTAP19-6Q3LI70 58 aa8.45□□□□□ -1.06
CTSF-201ENST00000310325 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
CTSF-201ENST00000310325 KRTAP19-7Q3SYF9 63 aa8.33□□□□□ -1.08
CTSF-201ENST00000310325 LCE3CQ5T5A8 94 aa8.28□□□□□ -1.08
CTSF-201ENST00000310325 MT1EP04732 61 aa8.13□□□□□ -1.11
CTSF-201ENST00000310325 FCGBPQ9Y6R7 5405 aaPredicted RBP8.09□□□□□ -1.11
CTSF-201ENST00000310325 A0A0A0MQY5 61 aa8.08□□□□□ -1.12
CTSF-201ENST00000310325 KRTAP19-4Q3LI73 84 aa8.07□□□□□ -1.12
CTSF-201ENST00000310325 MT1LQ93083 61 aa8.07□□□□□ -1.12
CTSF-201ENST00000310325 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
CTSF-201ENST00000310325 KRTAP4-7Q9BYR0 210 aa7.95□□□□□ -1.14
CTSF-201ENST00000310325 KRTAP9-6A8MVA2 160 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms