RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 RPL37P61927 97 aaKnown RBP6.02□□□□□ -1.45
PTPN2-201ENST00000309660 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
PTPN2-201ENST00000309660 A0A1B0GU33 70 aa6.01□□□□□ -1.45
PTPN2-201ENST00000309660 RBM12B-AS1Q9P1G2 102 aa5.98□□□□□ -1.45
PTPN2-201ENST00000309660 H0YAA0 97 aa5.97□□□□□ -1.45
PTPN2-201ENST00000309660 MT1HL1P0DM35 61 aa5.97□□□□□ -1.45
PTPN2-201ENST00000309660 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
PTPN2-201ENST00000309660 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
PTPN2-201ENST00000309660 S4R3F8 94 aa5.9□□□□□ -1.46
PTPN2-201ENST00000309660 LRP2P98164 4655 aa5.88□□□□□ -1.47
PTPN2-201ENST00000309660 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
PTPN2-201ENST00000309660 A0A0D9SG42 100 aa5.87□□□□□ -1.47
PTPN2-201ENST00000309660 LPAP08519 4548 aa5.87□□□□□ -1.47
PTPN2-201ENST00000309660 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
PTPN2-201ENST00000309660 CSAG1Q6PB30 78 aa5.83□□□□□ -1.48
PTPN2-201ENST00000309660 K7ERS5 55 aa5.82□□□□□ -1.48
PTPN2-201ENST00000309660 ABCA13Q86UQ4 5058 aa5.81□□□□□ -1.48
PTPN2-201ENST00000309660 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
PTPN2-201ENST00000309660 P0C880 135 aa5.79□□□□□ -1.48
PTPN2-201ENST00000309660 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
PTPN2-201ENST00000309660 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
PTPN2-201ENST00000309660 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
PTPN2-201ENST00000309660 J3QL48 77 aa5.76□□□□□ -1.49
PTPN2-201ENST00000309660 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
PTPN2-201ENST00000309660 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
PTPN2-201ENST00000309660 SPINT4Q6UDR6 99 aa5.67□□□□□ -1.5
PTPN2-201ENST00000309660 SEC61BP60468 96 aaKnown RBP5.64□□□□□ -1.51
PTPN2-201ENST00000309660 HERC2O95714 4834 aa5.63□□□□□ -1.51
PTPN2-201ENST00000309660 ROMO1P60602 79 aa5.61□□□□□ -1.51
PTPN2-201ENST00000309660 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
PTPN2-201ENST00000309660 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
PTPN2-201ENST00000309660 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
PTPN2-201ENST00000309660 M0QZ58 72 aa5.55□□□□□ -1.52
PTPN2-201ENST00000309660 MUC2Q02817 5179 aa5.54□□□□□ -1.52
PTPN2-201ENST00000309660 R4GN34 69 aa5.53□□□□□ -1.52
PTPN2-201ENST00000309660 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
PTPN2-201ENST00000309660 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
PTPN2-201ENST00000309660 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
PTPN2-201ENST00000309660 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
PTPN2-201ENST00000309660 HERC1Q15751 4861 aa5.42□□□□□ -1.54
PTPN2-201ENST00000309660 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.54
PTPN2-201ENST00000309660 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
PTPN2-201ENST00000309660 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
PTPN2-201ENST00000309660 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
PTPN2-201ENST00000309660 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
PTPN2-201ENST00000309660 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
PTPN2-201ENST00000309660 M0R2T5 61 aa5.22□□□□□ -1.57
PTPN2-201ENST00000309660 RNF213Q63HN8 5207 aa5.21□□□□□ -1.57
PTPN2-201ENST00000309660 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
PTPN2-201ENST00000309660 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.58
PTPN2-201ENST00000309660 H3BS24 57 aa5.1□□□□□ -1.59
PTPN2-201ENST00000309660 LCE2CQ5TA81 110 aa5.1□□□□□ -1.59
PTPN2-201ENST00000309660 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
PTPN2-201ENST00000309660 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
PTPN2-201ENST00000309660 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
PTPN2-201ENST00000309660 MT1HP80294 61 aa5.01□□□□□ -1.61
PTPN2-201ENST00000309660 PLAC4Q8WY50 150 aa5□□□□□ -1.61
PTPN2-201ENST00000309660 TNP1P09430 55 aa4.98□□□□□ -1.61
PTPN2-201ENST00000309660 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
PTPN2-201ENST00000309660 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
PTPN2-201ENST00000309660 MT1FP04733 61 aa4.93□□□□□ -1.62
PTPN2-201ENST00000309660 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
PTPN2-201ENST00000309660 MT2AP02795 61 aa4.91□□□□□ -1.62
PTPN2-201ENST00000309660 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
PTPN2-201ENST00000309660 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
PTPN2-201ENST00000309660 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
PTPN2-201ENST00000309660 MT1BP07438 61 aa4.7□□□□□ -1.66
PTPN2-201ENST00000309660 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
PTPN2-201ENST00000309660 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
PTPN2-201ENST00000309660 MT1XP80297 61 aa4.65□□□□□ -1.67
PTPN2-201ENST00000309660 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
PTPN2-201ENST00000309660 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
PTPN2-201ENST00000309660 USH2AO75445 5202 aa4.63□□□□□ -1.67
PTPN2-201ENST00000309660 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
PTPN2-201ENST00000309660 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
PTPN2-201ENST00000309660 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
PTPN2-201ENST00000309660 LCE2BO14633 110 aa4.52□□□□□ -1.69
PTPN2-201ENST00000309660 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
PTPN2-201ENST00000309660 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
PTPN2-201ENST00000309660 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
PTPN2-201ENST00000309660 KMT2DO14686 5537 aa4.47□□□□□ -1.69
PTPN2-201ENST00000309660 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
PTPN2-201ENST00000309660 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
PTPN2-201ENST00000309660 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
PTPN2-201ENST00000309660 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
PTPN2-201ENST00000309660 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
PTPN2-201ENST00000309660 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
PTPN2-201ENST00000309660 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
PTPN2-201ENST00000309660 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
PTPN2-201ENST00000309660 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
PTPN2-201ENST00000309660 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
PTPN2-201ENST00000309660 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
PTPN2-201ENST00000309660 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
PTPN2-201ENST00000309660 MT1EP04732 61 aa4.02□□□□□ -1.77
PTPN2-201ENST00000309660 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
PTPN2-201ENST00000309660 MT1LQ93083 61 aa4.01□□□□□ -1.77
PTPN2-201ENST00000309660 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
PTPN2-201ENST00000309660 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
PTPN2-201ENST00000309660 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
PTPN2-201ENST00000309660 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms