RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 C10orf95Q9H7T3 257 aa5.76□□□□□ -1.49
PTPN7-201ENST00000309017 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
PTPN7-201ENST00000309017 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
PTPN7-201ENST00000309017 HSPG2P98160 4391 aa5.74□□□□□ -1.49
PTPN7-201ENST00000309017 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
PTPN7-201ENST00000309017 P0C880 135 aa5.72□□□□□ -1.49
PTPN7-201ENST00000309017 LPAP08519 4548 aa5.71□□□□□ -1.5
PTPN7-201ENST00000309017 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
PTPN7-201ENST00000309017 DYNC1H1Q14204 4646 aaKnown RBP5.7□□□□□ -1.5
PTPN7-201ENST00000309017 Q5VSD8 79 aa5.69□□□□□ -1.5
PTPN7-201ENST00000309017 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
PTPN7-201ENST00000309017 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
PTPN7-201ENST00000309017 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
PTPN7-201ENST00000309017 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
PTPN7-201ENST00000309017 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
PTPN7-201ENST00000309017 MYCBP2O75592 4640 aa5.65□□□□□ -1.5
PTPN7-201ENST00000309017 XP32Q5T750 250 aa5.63□□□□□ -1.51
PTPN7-201ENST00000309017 NDUFAF8A1L188 74 aa5.62□□□□□ -1.51
PTPN7-201ENST00000309017 RYR3Q15413 4870 aa5.62□□□□□ -1.51
PTPN7-201ENST00000309017 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
PTPN7-201ENST00000309017 A0A1B0GVY2 172 aa5.6□□□□□ -1.51
PTPN7-201ENST00000309017 TNXBP22105 4242 aa5.58□□□□□ -1.52
PTPN7-201ENST00000309017 KIAA1109Q2LD37 5005 aa5.57□□□□□ -1.52
PTPN7-201ENST00000309017 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
PTPN7-201ENST00000309017 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
PTPN7-201ENST00000309017 EPPK1P58107 5090 aaKnown RBP5.53□□□□□ -1.52
PTPN7-201ENST00000309017 M0QZ58 72 aa5.49□□□□□ -1.53
PTPN7-201ENST00000309017 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
PTPN7-201ENST00000309017 RYR2Q92736 4967 aa5.47□□□□□ -1.53
PTPN7-201ENST00000309017 R4GN34 69 aa5.45□□□□□ -1.54
PTPN7-201ENST00000309017 RYR1P21817 5038 aa5.44□□□□□ -1.54
PTPN7-201ENST00000309017 KRTAP4-5Q9BYR2 181 aa5.42□□□□□ -1.54
PTPN7-201ENST00000309017 ABCA13Q86UQ4 5058 aa5.38□□□□□ -1.55
PTPN7-201ENST00000309017 LRP2P98164 4655 aa5.35□□□□□ -1.55
PTPN7-201ENST00000309017 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
PTPN7-201ENST00000309017 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
PTPN7-201ENST00000309017 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
PTPN7-201ENST00000309017 PCLOQ9Y6V0 5065 aa5.26□□□□□ -1.57
PTPN7-201ENST00000309017 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
PTPN7-201ENST00000309017 HERC2O95714 4834 aa5.25□□□□□ -1.57
PTPN7-201ENST00000309017 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
PTPN7-201ENST00000309017 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
PTPN7-201ENST00000309017 M0R2T5 61 aa5.2□□□□□ -1.58
PTPN7-201ENST00000309017 LORP23490 312 aaPredicted RBP5.2□□□□□ -1.58
PTPN7-201ENST00000309017 SEC61BP60468 96 aaKnown RBP5.2□□□□□ -1.58
PTPN7-201ENST00000309017 MUC2Q02817 5179 aa5.18□□□□□ -1.58
PTPN7-201ENST00000309017 HERC1Q15751 4861 aa5.17□□□□□ -1.58
PTPN7-201ENST00000309017 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
PTPN7-201ENST00000309017 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
PTPN7-201ENST00000309017 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
PTPN7-201ENST00000309017 A0A0A0MQY5 61 aa5.06□□□□□ -1.6
PTPN7-201ENST00000309017 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
PTPN7-201ENST00000309017 KRTAP4-1Q9BYQ7 146 aa5.01□□□□□ -1.61
PTPN7-201ENST00000309017 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
PTPN7-201ENST00000309017 TNP1P09430 55 aa4.99□□□□□ -1.61
PTPN7-201ENST00000309017 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
PTPN7-201ENST00000309017 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
PTPN7-201ENST00000309017 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
PTPN7-201ENST00000309017 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
PTPN7-201ENST00000309017 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
PTPN7-201ENST00000309017 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
PTPN7-201ENST00000309017 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
PTPN7-201ENST00000309017 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
PTPN7-201ENST00000309017 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
PTPN7-201ENST00000309017 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
PTPN7-201ENST00000309017 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
PTPN7-201ENST00000309017 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
PTPN7-201ENST00000309017 MT1FP04733 61 aa4.44□□□□□ -1.7
PTPN7-201ENST00000309017 MT1HP80294 61 aa4.43□□□□□ -1.7
PTPN7-201ENST00000309017 MT2AP02795 61 aa4.42□□□□□ -1.7
PTPN7-201ENST00000309017 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
PTPN7-201ENST00000309017 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
PTPN7-201ENST00000309017 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
PTPN7-201ENST00000309017 INE1O15225 51 aa4.39□□□□□ -1.71
PTPN7-201ENST00000309017 USH2AO75445 5202 aa4.36□□□□□ -1.71
PTPN7-201ENST00000309017 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
PTPN7-201ENST00000309017 MT1XP80297 61 aa4.32□□□□□ -1.72
PTPN7-201ENST00000309017 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
PTPN7-201ENST00000309017 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
PTPN7-201ENST00000309017 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
PTPN7-201ENST00000309017 MT1BP07438 61 aa4.3□□□□□ -1.72
PTPN7-201ENST00000309017 KMT2DO14686 5537 aa4.29□□□□□ -1.72
PTPN7-201ENST00000309017 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
PTPN7-201ENST00000309017 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
PTPN7-201ENST00000309017 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.74
PTPN7-201ENST00000309017 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
PTPN7-201ENST00000309017 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
PTPN7-201ENST00000309017 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
PTPN7-201ENST00000309017 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
PTPN7-201ENST00000309017 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
PTPN7-201ENST00000309017 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
PTPN7-201ENST00000309017 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
PTPN7-201ENST00000309017 LCE2BO14633 110 aa3.96□□□□□ -1.78
PTPN7-201ENST00000309017 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
PTPN7-201ENST00000309017 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
PTPN7-201ENST00000309017 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
PTPN7-201ENST00000309017 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
PTPN7-201ENST00000309017 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
PTPN7-201ENST00000309017 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
PTPN7-201ENST00000309017 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms