RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 ATOX1O00244 68 aa9.59□□□□□ -0.87
MRPL39-201ENST00000307301 FAM236AA0A1B0GUQ0 79 aa9.57□□□□□ -0.88
MRPL39-201ENST00000307301 FAM236BA0A1B0GV22 79 aa9.57□□□□□ -0.88
MRPL39-201ENST00000307301 FCGBPQ9Y6R7 5405 aaPredicted RBP9.55□□□□□ -0.88
MRPL39-201ENST00000307301 KRTAP19-6Q3LI70 58 aa9.54□□□□□ -0.88
MRPL39-201ENST00000307301 J3QR89 54 aa9.53□□□□□ -0.88
MRPL39-201ENST00000307301 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
MRPL39-201ENST00000307301 LINC00208Q96KT6 92 aa9.49□□□□□ -0.89
MRPL39-201ENST00000307301 KRTAP4-7Q9BYR0 210 aa9.49□□□□□ -0.89
MRPL39-201ENST00000307301 KLKP1Q107X0 134 aa9.45□□□□□ -0.9
MRPL39-201ENST00000307301 LCE1DQ5T752 114 aa9.45□□□□□ -0.9
MRPL39-201ENST00000307301 MP68P56378 58 aa9.43□□□□□ -0.9
MRPL39-201ENST00000307301 KRTAP9-7A8MTY7 169 aa9.42□□□□□ -0.9
MRPL39-201ENST00000307301 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
MRPL39-201ENST00000307301 A8MUN3 132 aa9.36□□□□□ -0.91
MRPL39-201ENST00000307301 NDUFC1O43677 76 aa9.35□□□□□ -0.91
MRPL39-201ENST00000307301 SCGB1A1P11684 91 aa9.33□□□□□ -0.92
MRPL39-201ENST00000307301 MT1BP07438 61 aa9.31□□□□□ -0.92
MRPL39-201ENST00000307301 H3BPC8 53 aa9.3□□□□□ -0.92
MRPL39-201ENST00000307301 KRTAP19-8Q3LI54 63 aa9.3□□□□□ -0.92
MRPL39-201ENST00000307301 IMUPQ9GZP8 106 aa9.3□□□□□ -0.92
MRPL39-201ENST00000307301 Q5VV11 94 aa9.29□□□□□ -0.92
MRPL39-201ENST00000307301 KRTAP4-9Q9BYQ8 210 aa9.25□□□□□ -0.93
MRPL39-201ENST00000307301 H0YAA0 97 aa9.24□□□□□ -0.93
MRPL39-201ENST00000307301 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
MRPL39-201ENST00000307301 K7ERU9 68 aa9.23□□□□□ -0.93
MRPL39-201ENST00000307301 CRIPTQ9P021 101 aa9.23□□□□□ -0.93
MRPL39-201ENST00000307301 MACF1Q9UPN3 7388 aaKnown RBP9.18□□□□□ -0.94
MRPL39-201ENST00000307301 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
MRPL39-201ENST00000307301 DMAC1Q96GE9 116 aa9.16□□□□□ -0.94
MRPL39-201ENST00000307301 A6NN06 94 aa9.14□□□□□ -0.95
MRPL39-201ENST00000307301 KRTAP4-2Q9BYR5 136 aa9.14□□□□□ -0.95
MRPL39-201ENST00000307301 TRAV7A0A075B6U4 112 aa9.09□□□□□ -0.95
MRPL39-201ENST00000307301 SMIM20Q8N5G0 67 aa9.08□□□□□ -0.96
MRPL39-201ENST00000307301 KRTAP10-5P60370 271 aa9.06□□□□□ -0.96
MRPL39-201ENST00000307301 SYNE2Q8WXH0 6885 aaKnown RBP9.03□□□□□ -0.96
MRPL39-201ENST00000307301 LCE4AQ5TA78 99 aa9.03□□□□□ -0.96
MRPL39-201ENST00000307301 P0C880 135 aa8.98□□□□□ -0.97
MRPL39-201ENST00000307301 KRTAP6-3Q3LI67 103 aa8.98□□□□□ -0.97
MRPL39-201ENST00000307301 ACYP2P14621 99 aa8.95□□□□□ -0.98
MRPL39-201ENST00000307301 C20orf197Q8N268 126 aa8.93□□□□□ -0.98
MRPL39-201ENST00000307301 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
MRPL39-201ENST00000307301 R4GN34 69 aa8.91□□□□□ -0.98
MRPL39-201ENST00000307301 KRTAP4-11Q9BYQ6 195 aa8.88□□□□□ -0.99
MRPL39-201ENST00000307301 M0QZ58 72 aa8.86□□□□□ -0.99
MRPL39-201ENST00000307301 SERP2Q8N6R1 65 aa8.82□□□□□ -1
MRPL39-201ENST00000307301 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
MRPL39-201ENST00000307301 PLAC4Q8WY50 150 aa8.81□□□□□ -1
MRPL39-201ENST00000307301 CHKB-CPT1BH3BT56 60 aa8.79□□□□□ -1
MRPL39-201ENST00000307301 SPANXA2-OT1Q8N9U9 137 aa8.76□□□□□ -1.01
MRPL39-201ENST00000307301 MT1XP80297 61 aa8.75□□□□□ -1.01
MRPL39-201ENST00000307301 PRO2289Q9P1D8 64 aa8.74□□□□□ -1.01
MRPL39-201ENST00000307301 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
MRPL39-201ENST00000307301 KRTAP5-9P26371 169 aa8.62□□□□□ -1.03
MRPL39-201ENST00000307301 COX7CP15954 63 aa8.58□□□□□ -1.04
MRPL39-201ENST00000307301 LCE5AQ5TCM9 118 aa8.53□□□□□ -1.04
MRPL39-201ENST00000307301 COA5Q86WW8 74 aa8.53□□□□□ -1.04
MRPL39-201ENST00000307301 KRTAP12-2P59991 146 aa8.5□□□□□ -1.05
MRPL39-201ENST00000307301 MUC12Q9UKN1 5478 aa8.48□□□□□ -1.05
MRPL39-201ENST00000307301 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
MRPL39-201ENST00000307301 NEBP20929 6669 aa8.47□□□□□ -1.05
MRPL39-201ENST00000307301 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
MRPL39-201ENST00000307301 H7BZZ5 65 aa8.44□□□□□ -1.06
MRPL39-201ENST00000307301 KMT2DO14686 5537 aa8.44□□□□□ -1.06
MRPL39-201ENST00000307301 KRTAP8-1Q8IUC2 63 aa8.41□□□□□ -1.06
MRPL39-201ENST00000307301 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.06
MRPL39-201ENST00000307301 KRTAP10-7P60409 375 aaPredicted RBP8.36□□□□□ -1.07
MRPL39-201ENST00000307301 ANAPC13Q9BS18 74 aa8.33□□□□□ -1.08
MRPL39-201ENST00000307301 SEC61GP60059 68 aa8.32□□□□□ -1.08
MRPL39-201ENST00000307301 KRTAP5-3Q6L8H2 238 aa8.31□□□□□ -1.08
MRPL39-201ENST00000307301 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
MRPL39-201ENST00000307301 MDN1Q9NU22 5596 aa8.3□□□□□ -1.08
MRPL39-201ENST00000307301 KRTAP10-12P60413 245 aa8.3□□□□□ -1.08
MRPL39-201ENST00000307301 KRTAP20-1Q3LI63 56 aa8.27□□□□□ -1.09
MRPL39-201ENST00000307301 SPRR2EP22531 72 aa8.26□□□□□ -1.09
MRPL39-201ENST00000307301 SPRR2BP35325 72 aa8.26□□□□□ -1.09
MRPL39-201ENST00000307301 SPRR2AP35326 72 aa8.26□□□□□ -1.09
MRPL39-201ENST00000307301 KRTAP19-4Q3LI73 84 aa8.26□□□□□ -1.09
MRPL39-201ENST00000307301 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
MRPL39-201ENST00000307301 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
MRPL39-201ENST00000307301 A0A0D9SG42 100 aa8.19□□□□□ -1.1
MRPL39-201ENST00000307301 A0A1B0GU33 70 aa8.19□□□□□ -1.1
MRPL39-201ENST00000307301 CCDC179H3BU77 68 aa8.18□□□□□ -1.1
MRPL39-201ENST00000307301 LCE1AQ5T7P2 110 aa8.16□□□□□ -1.1
MRPL39-201ENST00000307301 A0A1B0GU69 56 aa8.08□□□□□ -1.12
MRPL39-201ENST00000307301 KRTAP2-3P0C7H8 128 aa8.08□□□□□ -1.12
MRPL39-201ENST00000307301 KRTAP2-4Q9BYR9 128 aa8.08□□□□□ -1.12
MRPL39-201ENST00000307301 SPINT4Q6UDR6 99 aa8.06□□□□□ -1.12
MRPL39-201ENST00000307301 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
MRPL39-201ENST00000307301 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
MRPL39-201ENST00000307301 SPRR2DP22532 72 aa7.98□□□□□ -1.13
MRPL39-201ENST00000307301 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
MRPL39-201ENST00000307301 A8MU10 97 aa7.92□□□□□ -1.14
MRPL39-201ENST00000307301 PRR15LQ9BU68 103 aa7.86□□□□□ -1.15
MRPL39-201ENST00000307301 H3BS24 57 aa7.85□□□□□ -1.15
MRPL39-201ENST00000307301 TMEM258P61165 79 aa7.85□□□□□ -1.15
MRPL39-201ENST00000307301 KRTAP2-2Q9BYT5 123 aa7.83□□□□□ -1.16
MRPL39-201ENST00000307301 KRTAP2-1Q9BYU5 128 aa7.83□□□□□ -1.16
MRPL39-201ENST00000307301 KRTAP19-7Q3SYF9 63 aa7.82□□□□□ -1.16
MRPL39-201ENST00000307301 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms