RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 H1FX-AS1Q4G0G2 97 aa7.96□□□□□ -1.14
CSDC2-201ENST00000306149 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
CSDC2-201ENST00000306149 KRTAP10-8P60410 259 aa7.88□□□□□ -1.15
CSDC2-201ENST00000306149 Q5VSD8 79 aa7.88□□□□□ -1.15
CSDC2-201ENST00000306149 RYR3Q15413 4870 aa7.85□□□□□ -1.15
CSDC2-201ENST00000306149 KRTAP17-1Q9BYP8 105 aa7.83□□□□□ -1.16
CSDC2-201ENST00000306149 ROMO1P60602 79 aa7.8□□□□□ -1.16
CSDC2-201ENST00000306149 KIAA1109Q2LD37 5005 aa7.8□□□□□ -1.16
CSDC2-201ENST00000306149 RYR1P21817 5038 aa7.79□□□□□ -1.16
CSDC2-201ENST00000306149 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
CSDC2-201ENST00000306149 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
CSDC2-201ENST00000306149 XP32Q5T750 250 aa7.79□□□□□ -1.16
CSDC2-201ENST00000306149 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
CSDC2-201ENST00000306149 K7ERS5 55 aa7.75□□□□□ -1.17
CSDC2-201ENST00000306149 CRIPTQ9P021 101 aa7.73□□□□□ -1.17
CSDC2-201ENST00000306149 LPAP08519 4548 aa7.73□□□□□ -1.17
CSDC2-201ENST00000306149 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
CSDC2-201ENST00000306149 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
CSDC2-201ENST00000306149 LRP2P98164 4655 aa7.67□□□□□ -1.18
CSDC2-201ENST00000306149 S4R3F8 94 aa7.66□□□□□ -1.18
CSDC2-201ENST00000306149 A0A0D9SG42 100 aa7.65□□□□□ -1.18
CSDC2-201ENST00000306149 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
CSDC2-201ENST00000306149 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
CSDC2-201ENST00000306149 P0C880 135 aa7.63□□□□□ -1.19
CSDC2-201ENST00000306149 EPPK1P58107 5090 aaKnown RBP7.58□□□□□ -1.2
CSDC2-201ENST00000306149 ABCA13Q86UQ4 5058 aa7.54□□□□□ -1.2
CSDC2-201ENST00000306149 SPINT4Q6UDR6 99 aa7.45□□□□□ -1.22
CSDC2-201ENST00000306149 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
CSDC2-201ENST00000306149 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
CSDC2-201ENST00000306149 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
CSDC2-201ENST00000306149 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
CSDC2-201ENST00000306149 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
CSDC2-201ENST00000306149 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
CSDC2-201ENST00000306149 M0QZ58 72 aa7.31□□□□□ -1.24
CSDC2-201ENST00000306149 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
CSDC2-201ENST00000306149 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
CSDC2-201ENST00000306149 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
CSDC2-201ENST00000306149 HERC2O95714 4834 aa7.16□□□□□ -1.26
CSDC2-201ENST00000306149 SEC61BP60468 96 aaKnown RBP7.15□□□□□ -1.26
CSDC2-201ENST00000306149 MUC2Q02817 5179 aa7.15□□□□□ -1.27
CSDC2-201ENST00000306149 R4GN34 69 aa7.14□□□□□ -1.27
CSDC2-201ENST00000306149 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
CSDC2-201ENST00000306149 J3QL48 77 aa7.12□□□□□ -1.27
CSDC2-201ENST00000306149 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
CSDC2-201ENST00000306149 BIRC6Q9NR09 4857 aa7.08□□□□□ -1.28
CSDC2-201ENST00000306149 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
CSDC2-201ENST00000306149 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
CSDC2-201ENST00000306149 HERC1Q15751 4861 aa6.89□□□□□ -1.31
CSDC2-201ENST00000306149 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
CSDC2-201ENST00000306149 PCLOQ9Y6V0 5065 aa6.82□□□□□ -1.32
CSDC2-201ENST00000306149 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
CSDC2-201ENST00000306149 FAT4Q6V0I7 4981 aa6.78□□□□□ -1.32
CSDC2-201ENST00000306149 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
CSDC2-201ENST00000306149 HMCN2Q8NDA2 5059 aa6.73□□□□□ -1.33
CSDC2-201ENST00000306149 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
CSDC2-201ENST00000306149 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
CSDC2-201ENST00000306149 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
CSDC2-201ENST00000306149 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
CSDC2-201ENST00000306149 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
CSDC2-201ENST00000306149 TNP1P09430 55 aa6.51□□□□□ -1.37
CSDC2-201ENST00000306149 M0R2T5 61 aa6.5□□□□□ -1.37
CSDC2-201ENST00000306149 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
CSDC2-201ENST00000306149 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
CSDC2-201ENST00000306149 MT1HP80294 61 aa6.4□□□□□ -1.38
CSDC2-201ENST00000306149 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
CSDC2-201ENST00000306149 MT1FP04733 61 aa6.34□□□□□ -1.4
CSDC2-201ENST00000306149 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
CSDC2-201ENST00000306149 MT2AP02795 61 aa6.31□□□□□ -1.4
CSDC2-201ENST00000306149 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
CSDC2-201ENST00000306149 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
CSDC2-201ENST00000306149 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
CSDC2-201ENST00000306149 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
CSDC2-201ENST00000306149 MT1BP07438 61 aa6.1□□□□□ -1.43
CSDC2-201ENST00000306149 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
CSDC2-201ENST00000306149 MT1XP80297 61 aa6.06□□□□□ -1.44
CSDC2-201ENST00000306149 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
CSDC2-201ENST00000306149 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
CSDC2-201ENST00000306149 LCE2BO14633 110 aa5.96□□□□□ -1.45
CSDC2-201ENST00000306149 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
CSDC2-201ENST00000306149 USH2AO75445 5202 aa5.93□□□□□ -1.46
CSDC2-201ENST00000306149 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
CSDC2-201ENST00000306149 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
CSDC2-201ENST00000306149 KMT2DO14686 5537 aa5.83□□□□□ -1.48
CSDC2-201ENST00000306149 INE1O15225 51 aa5.74□□□□□ -1.49
CSDC2-201ENST00000306149 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
CSDC2-201ENST00000306149 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
CSDC2-201ENST00000306149 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
CSDC2-201ENST00000306149 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
CSDC2-201ENST00000306149 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
CSDC2-201ENST00000306149 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
CSDC2-201ENST00000306149 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
CSDC2-201ENST00000306149 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.55
CSDC2-201ENST00000306149 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
CSDC2-201ENST00000306149 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
CSDC2-201ENST00000306149 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
CSDC2-201ENST00000306149 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
CSDC2-201ENST00000306149 MT1EP04732 61 aa5.23□□□□□ -1.57
CSDC2-201ENST00000306149 MT1LQ93083 61 aa5.23□□□□□ -1.57
CSDC2-201ENST00000306149 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
CSDC2-201ENST00000306149 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms