RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SPINK7P58062 85 aa7.76□□□□□ -1.17
SHCBP1-201ENST00000303383 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
SHCBP1-201ENST00000303383 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
SHCBP1-201ENST00000303383 TPRXLQ17RH7 258 aa7.7□□□□□ -1.18
SHCBP1-201ENST00000303383 CSAG1Q6PB30 78 aa7.66□□□□□ -1.18
SHCBP1-201ENST00000303383 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
SHCBP1-201ENST00000303383 ROMO1P60602 79 aa7.61□□□□□ -1.19
SHCBP1-201ENST00000303383 ABCA13Q86UQ4 5058 aa7.61□□□□□ -1.19
SHCBP1-201ENST00000303383 HERC2O95714 4834 aa7.59□□□□□ -1.19
SHCBP1-201ENST00000303383 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.19
SHCBP1-201ENST00000303383 COX6B2Q6YFQ2 88 aa7.57□□□□□ -1.2
SHCBP1-201ENST00000303383 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
SHCBP1-201ENST00000303383 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
SHCBP1-201ENST00000303383 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
SHCBP1-201ENST00000303383 P0C880 135 aa7.46□□□□□ -1.22
SHCBP1-201ENST00000303383 A0A1B0GU69 56 aa7.46□□□□□ -1.22
SHCBP1-201ENST00000303383 LRP2P98164 4655 aa7.43□□□□□ -1.22
SHCBP1-201ENST00000303383 LPAP08519 4548 aa7.42□□□□□ -1.22
SHCBP1-201ENST00000303383 S4R3F8 94 aa7.37□□□□□ -1.23
SHCBP1-201ENST00000303383 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
SHCBP1-201ENST00000303383 PCLOQ9Y6V0 5065 aa7.28□□□□□ -1.24
SHCBP1-201ENST00000303383 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
SHCBP1-201ENST00000303383 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
SHCBP1-201ENST00000303383 UQCR11O14957 56 aa7.24□□□□□ -1.25
SHCBP1-201ENST00000303383 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
SHCBP1-201ENST00000303383 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.26
SHCBP1-201ENST00000303383 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
SHCBP1-201ENST00000303383 HERC1Q15751 4861 aa7.19□□□□□ -1.26
SHCBP1-201ENST00000303383 A0A1B0GU33 70 aa7.15□□□□□ -1.26
SHCBP1-201ENST00000303383 LUZP6Q538Z0 58 aa7.15□□□□□ -1.26
SHCBP1-201ENST00000303383 HMCN2Q8NDA2 5059 aa7.08□□□□□ -1.28
SHCBP1-201ENST00000303383 MUC17Q685J3 4493 aa7.06□□□□□ -1.28
SHCBP1-201ENST00000303383 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
SHCBP1-201ENST00000303383 H0YAA0 97 aa6.99□□□□□ -1.29
SHCBP1-201ENST00000303383 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
SHCBP1-201ENST00000303383 KRTAP3-2Q9BYR7 98 aa6.99□□□□□ -1.29
SHCBP1-201ENST00000303383 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
SHCBP1-201ENST00000303383 K7ERS5 55 aa6.96□□□□□ -1.3
SHCBP1-201ENST00000303383 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
SHCBP1-201ENST00000303383 MUC2Q02817 5179 aa6.95□□□□□ -1.3
SHCBP1-201ENST00000303383 A0A0D9SG42 100 aa6.91□□□□□ -1.3
SHCBP1-201ENST00000303383 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
SHCBP1-201ENST00000303383 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
SHCBP1-201ENST00000303383 M0R2T5 61 aa6.85□□□□□ -1.31
SHCBP1-201ENST00000303383 M0QZ58 72 aa6.85□□□□□ -1.31
SHCBP1-201ENST00000303383 R4GN34 69 aa6.85□□□□□ -1.31
SHCBP1-201ENST00000303383 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
SHCBP1-201ENST00000303383 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
SHCBP1-201ENST00000303383 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
SHCBP1-201ENST00000303383 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
SHCBP1-201ENST00000303383 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
SHCBP1-201ENST00000303383 MT1HP80294 61 aa6.69□□□□□ -1.34
SHCBP1-201ENST00000303383 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
SHCBP1-201ENST00000303383 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
SHCBP1-201ENST00000303383 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
SHCBP1-201ENST00000303383 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
SHCBP1-201ENST00000303383 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
SHCBP1-201ENST00000303383 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
SHCBP1-201ENST00000303383 MT2AP02795 61 aa6.46□□□□□ -1.38
SHCBP1-201ENST00000303383 MT1FP04733 61 aa6.43□□□□□ -1.38
SHCBP1-201ENST00000303383 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
SHCBP1-201ENST00000303383 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
SHCBP1-201ENST00000303383 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
SHCBP1-201ENST00000303383 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
SHCBP1-201ENST00000303383 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
SHCBP1-201ENST00000303383 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
SHCBP1-201ENST00000303383 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
SHCBP1-201ENST00000303383 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
SHCBP1-201ENST00000303383 TNP1P09430 55 aa6.13□□□□□ -1.43
SHCBP1-201ENST00000303383 MT1BP07438 61 aa6.09□□□□□ -1.43
SHCBP1-201ENST00000303383 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
SHCBP1-201ENST00000303383 LCE2BO14633 110 aa6□□□□□ -1.45
SHCBP1-201ENST00000303383 PP632Q6XCG6 107 aa6□□□□□ -1.45
SHCBP1-201ENST00000303383 MT1XP80297 61 aa5.94□□□□□ -1.46
SHCBP1-201ENST00000303383 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
SHCBP1-201ENST00000303383 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
SHCBP1-201ENST00000303383 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
SHCBP1-201ENST00000303383 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
SHCBP1-201ENST00000303383 USH2AO75445 5202 aa5.77□□□□□ -1.49
SHCBP1-201ENST00000303383 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
SHCBP1-201ENST00000303383 INE1O15225 51 aa5.62□□□□□ -1.51
SHCBP1-201ENST00000303383 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
SHCBP1-201ENST00000303383 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
SHCBP1-201ENST00000303383 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
SHCBP1-201ENST00000303383 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
SHCBP1-201ENST00000303383 SSPOA2VEC9 5147 aa5.54□□□□□ -1.52
SHCBP1-201ENST00000303383 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
SHCBP1-201ENST00000303383 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
SHCBP1-201ENST00000303383 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
SHCBP1-201ENST00000303383 KMT2DO14686 5537 aa5.42□□□□□ -1.54
SHCBP1-201ENST00000303383 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
SHCBP1-201ENST00000303383 KRTAP9-2Q9BYQ4 174 aa5.39□□□□□ -1.55
SHCBP1-201ENST00000303383 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
SHCBP1-201ENST00000303383 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
SHCBP1-201ENST00000303383 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
SHCBP1-201ENST00000303383 MT1EP04732 61 aa5.2□□□□□ -1.58
SHCBP1-201ENST00000303383 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
SHCBP1-201ENST00000303383 MT1LQ93083 61 aa5.12□□□□□ -1.59
SHCBP1-201ENST00000303383 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
SHCBP1-201ENST00000303383 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms