RNA–Protein interactions for RNA: ENST00000303145.11

MDM1-201, Transcript of Mdm1 nuclear protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MDM1, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-201ENST00000303145 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
MDM1-201ENST00000303145 PKHD1P08F94 4074 aa7□□□□□ -1.29
MDM1-201ENST00000303145 APOBP04114 4563 aaKnown RBP6.99□□□□□ -1.29
MDM1-201ENST00000303145 NDUFAF8A1L188 74 aa6.98□□□□□ -1.29
MDM1-201ENST00000303145 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
MDM1-201ENST00000303145 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
MDM1-201ENST00000303145 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
MDM1-201ENST00000303145 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
MDM1-201ENST00000303145 A0A0D9SG42 100 aa6.91□□□□□ -1.3
MDM1-201ENST00000303145 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
MDM1-201ENST00000303145 C10orf95Q9H7T3 257 aa6.89□□□□□ -1.31
MDM1-201ENST00000303145 DYNC1H1Q14204 4646 aaKnown RBP6.86□□□□□ -1.31
MDM1-201ENST00000303145 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.31
MDM1-201ENST00000303145 FAT1Q14517 4588 aa6.84□□□□□ -1.31
MDM1-201ENST00000303145 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
MDM1-201ENST00000303145 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
MDM1-201ENST00000303145 S4R3F8 94 aa6.83□□□□□ -1.32
MDM1-201ENST00000303145 FAT3Q8TDW7 4589 aa6.82□□□□□ -1.32
MDM1-201ENST00000303145 SMR3BP02814 79 aaPredicted RBP6.81□□□□□ -1.32
MDM1-201ENST00000303145 LRP1Q07954 4544 aaKnown RBP6.81□□□□□ -1.32
MDM1-201ENST00000303145 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
MDM1-201ENST00000303145 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
MDM1-201ENST00000303145 HERC2O95714 4834 aa6.79□□□□□ -1.32
MDM1-201ENST00000303145 TNXBP22105 4242 aa6.78□□□□□ -1.32
MDM1-201ENST00000303145 PCLOQ9Y6V0 5065 aa6.78□□□□□ -1.32
MDM1-201ENST00000303145 HSPG2P98160 4391 aa6.76□□□□□ -1.33
MDM1-201ENST00000303145 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
MDM1-201ENST00000303145 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
MDM1-201ENST00000303145 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
MDM1-201ENST00000303145 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
MDM1-201ENST00000303145 XP32Q5T750 250 aa6.73□□□□□ -1.33
MDM1-201ENST00000303145 RYR1P21817 5038 aa6.73□□□□□ -1.33
MDM1-201ENST00000303145 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
MDM1-201ENST00000303145 J3QL48 77 aa6.7□□□□□ -1.34
MDM1-201ENST00000303145 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
MDM1-201ENST00000303145 M0QZ58 72 aa6.59□□□□□ -1.35
MDM1-201ENST00000303145 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
MDM1-201ENST00000303145 Q5VSD8 79 aa6.49□□□□□ -1.37
MDM1-201ENST00000303145 LPAP08519 4548 aa6.45□□□□□ -1.38
MDM1-201ENST00000303145 HERC1Q15751 4861 aa6.45□□□□□ -1.38
MDM1-201ENST00000303145 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
MDM1-201ENST00000303145 LRP2P98164 4655 aa6.31□□□□□ -1.4
MDM1-201ENST00000303145 R4GN34 69 aa6.31□□□□□ -1.4
MDM1-201ENST00000303145 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
MDM1-201ENST00000303145 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
MDM1-201ENST00000303145 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
MDM1-201ENST00000303145 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
MDM1-201ENST00000303145 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
MDM1-201ENST00000303145 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
MDM1-201ENST00000303145 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
MDM1-201ENST00000303145 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
MDM1-201ENST00000303145 RNF213Q63HN8 5207 aa5.96□□□□□ -1.45
MDM1-201ENST00000303145 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
MDM1-201ENST00000303145 KRTAP19-2Q3LHN2 52 aa5.94□□□□□ -1.46
MDM1-201ENST00000303145 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
MDM1-201ENST00000303145 TNP1P09430 55 aa5.87□□□□□ -1.47
MDM1-201ENST00000303145 FLGP20930 4061 aaPredicted RBP5.8□□□□□ -1.48
MDM1-201ENST00000303145 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
MDM1-201ENST00000303145 MUC2Q02817 5179 aa5.75□□□□□ -1.49
MDM1-201ENST00000303145 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
MDM1-201ENST00000303145 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
MDM1-201ENST00000303145 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
MDM1-201ENST00000303145 INE1O15225 51 aa5.5□□□□□ -1.53
MDM1-201ENST00000303145 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
MDM1-201ENST00000303145 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
MDM1-201ENST00000303145 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
MDM1-201ENST00000303145 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
MDM1-201ENST00000303145 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
MDM1-201ENST00000303145 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
MDM1-201ENST00000303145 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
MDM1-201ENST00000303145 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
MDM1-201ENST00000303145 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
MDM1-201ENST00000303145 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
MDM1-201ENST00000303145 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
MDM1-201ENST00000303145 MT1FP04733 61 aa5.23□□□□□ -1.57
MDM1-201ENST00000303145 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
MDM1-201ENST00000303145 MT2AP02795 61 aa5.21□□□□□ -1.57
MDM1-201ENST00000303145 MT1XP80297 61 aa5.2□□□□□ -1.58
MDM1-201ENST00000303145 MT1HP80294 61 aa5.19□□□□□ -1.58
MDM1-201ENST00000303145 M0R2T5 61 aa5.18□□□□□ -1.58
MDM1-201ENST00000303145 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
MDM1-201ENST00000303145 MT1BP07438 61 aa5.16□□□□□ -1.58
MDM1-201ENST00000303145 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.58
MDM1-201ENST00000303145 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.6
MDM1-201ENST00000303145 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
MDM1-201ENST00000303145 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
MDM1-201ENST00000303145 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
MDM1-201ENST00000303145 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
MDM1-201ENST00000303145 USH2AO75445 5202 aa4.9□□□□□ -1.62
MDM1-201ENST00000303145 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
MDM1-201ENST00000303145 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
MDM1-201ENST00000303145 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
MDM1-201ENST00000303145 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
MDM1-201ENST00000303145 SSPOA2VEC9 5147 aa4.82□□□□□ -1.64
MDM1-201ENST00000303145 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
MDM1-201ENST00000303145 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
MDM1-201ENST00000303145 LCE2BO14633 110 aa4.76□□□□□ -1.65
MDM1-201ENST00000303145 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
MDM1-201ENST00000303145 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
MDM1-201ENST00000303145 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms