RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
CTNNA1-201ENST00000302763 A0A1B0GU33 70 aa4.2□□□□□ -1.74
CTNNA1-201ENST00000302763 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
CTNNA1-201ENST00000302763 PCLOQ9Y6V0 5065 aa4.2□□□□□ -1.74
CTNNA1-201ENST00000302763 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
CTNNA1-201ENST00000302763 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
CTNNA1-201ENST00000302763 J3QL48 77 aa4.17□□□□□ -1.74
CTNNA1-201ENST00000302763 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
CTNNA1-201ENST00000302763 CSAG1Q6PB30 78 aa4.16□□□□□ -1.74
CTNNA1-201ENST00000302763 SPATA8Q6RVD6 105 aa4.16□□□□□ -1.74
CTNNA1-201ENST00000302763 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
CTNNA1-201ENST00000302763 LRP2P98164 4655 aa4.14□□□□□ -1.75
CTNNA1-201ENST00000302763 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
CTNNA1-201ENST00000302763 MT1HL1P0DM35 61 aa4.13□□□□□ -1.75
CTNNA1-201ENST00000302763 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
CTNNA1-201ENST00000302763 Q5VSD8 79 aa4.13□□□□□ -1.75
CTNNA1-201ENST00000302763 RPS29P62273 56 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-201ENST00000302763 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
CTNNA1-201ENST00000302763 HERC1Q15751 4861 aa4.07□□□□□ -1.76
CTNNA1-201ENST00000302763 S4R3F8 94 aa4.06□□□□□ -1.76
CTNNA1-201ENST00000302763 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
CTNNA1-201ENST00000302763 H1FX-AS1Q4G0G2 97 aa4.04□□□□□ -1.76
CTNNA1-201ENST00000302763 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
CTNNA1-201ENST00000302763 ROMO1P60602 79 aa3.99□□□□□ -1.77
CTNNA1-201ENST00000302763 FLGP20930 4061 aaPredicted RBP3.99□□□□□ -1.77
CTNNA1-201ENST00000302763 MUC2Q02817 5179 aa3.98□□□□□ -1.77
CTNNA1-201ENST00000302763 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
CTNNA1-201ENST00000302763 R4GN34 69 aa3.98□□□□□ -1.77
CTNNA1-201ENST00000302763 A8MUU9 505 aa3.97□□□□□ -1.77
CTNNA1-201ENST00000302763 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
CTNNA1-201ENST00000302763 M0QZ58 72 aa3.95□□□□□ -1.78
CTNNA1-201ENST00000302763 M0R2T5 61 aa3.91□□□□□ -1.78
CTNNA1-201ENST00000302763 H0YAA0 97 aa3.91□□□□□ -1.78
CTNNA1-201ENST00000302763 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.78
CTNNA1-201ENST00000302763 P0C880 135 aa3.89□□□□□ -1.79
CTNNA1-201ENST00000302763 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
CTNNA1-201ENST00000302763 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
CTNNA1-201ENST00000302763 XP32Q5T750 250 aa3.88□□□□□ -1.79
CTNNA1-201ENST00000302763 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
CTNNA1-201ENST00000302763 SEC61BP60468 96 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-201ENST00000302763 TPRXLQ17RH7 258 aa3.82□□□□□ -1.8
CTNNA1-201ENST00000302763 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
CTNNA1-201ENST00000302763 KRTAP4-1Q9BYQ7 146 aa3.82□□□□□ -1.8
CTNNA1-201ENST00000302763 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CTNNA1-201ENST00000302763 KRTAP3-3Q9BYR6 98 aa3.78□□□□□ -1.8
CTNNA1-201ENST00000302763 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
CTNNA1-201ENST00000302763 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CTNNA1-201ENST00000302763 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
CTNNA1-201ENST00000302763 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
CTNNA1-201ENST00000302763 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
CTNNA1-201ENST00000302763 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
CTNNA1-201ENST00000302763 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
CTNNA1-201ENST00000302763 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
CTNNA1-201ENST00000302763 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
CTNNA1-201ENST00000302763 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
CTNNA1-201ENST00000302763 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
CTNNA1-201ENST00000302763 TNP1P09430 55 aa3.55□□□□□ -1.84
CTNNA1-201ENST00000302763 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
CTNNA1-201ENST00000302763 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
CTNNA1-201ENST00000302763 MT1HP80294 61 aa3.46□□□□□ -1.86
CTNNA1-201ENST00000302763 KRTAP9-8Q9BYQ0 159 aa3.41□□□□□ -1.86
CTNNA1-201ENST00000302763 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
CTNNA1-201ENST00000302763 LCE2AQ5TA79 106 aaPredicted RBP3.37□□□□□ -1.87
CTNNA1-201ENST00000302763 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
CTNNA1-201ENST00000302763 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.88
CTNNA1-201ENST00000302763 MT1FP04733 61 aa3.33□□□□□ -1.88
CTNNA1-201ENST00000302763 MT2AP02795 61 aa3.32□□□□□ -1.88
CTNNA1-201ENST00000302763 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
CTNNA1-201ENST00000302763 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
CTNNA1-201ENST00000302763 KRTAP9-3Q9BYQ3 159 aa3.27□□□□□ -1.89
CTNNA1-201ENST00000302763 USH2AO75445 5202 aa3.25□□□□□ -1.89
CTNNA1-201ENST00000302763 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
CTNNA1-201ENST00000302763 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.9
CTNNA1-201ENST00000302763 MT1BP07438 61 aa3.21□□□□□ -1.9
CTNNA1-201ENST00000302763 SSPOA2VEC9 5147 aa3.19□□□□□ -1.9
CTNNA1-201ENST00000302763 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
CTNNA1-201ENST00000302763 LCE2BO14633 110 aa3.18□□□□□ -1.9
CTNNA1-201ENST00000302763 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
CTNNA1-201ENST00000302763 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
CTNNA1-201ENST00000302763 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
CTNNA1-201ENST00000302763 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
CTNNA1-201ENST00000302763 MT1XP80297 61 aa3.11□□□□□ -1.91
CTNNA1-201ENST00000302763 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
CTNNA1-201ENST00000302763 KMT2DO14686 5537 aa3.06□□□□□ -1.92
CTNNA1-201ENST00000302763 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
CTNNA1-201ENST00000302763 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
CTNNA1-201ENST00000302763 INE1O15225 51 aa3.03□□□□□ -1.92
CTNNA1-201ENST00000302763 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
CTNNA1-201ENST00000302763 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
CTNNA1-201ENST00000302763 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
CTNNA1-201ENST00000302763 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
CTNNA1-201ENST00000302763 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
CTNNA1-201ENST00000302763 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
CTNNA1-201ENST00000302763 KRTAP4-8A0A0G2JLE6 195 aa2.83□□□□□ -1.96
CTNNA1-201ENST00000302763 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
CTNNA1-201ENST00000302763 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
CTNNA1-201ENST00000302763 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
CTNNA1-201ENST00000302763 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
CTNNA1-201ENST00000302763 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
CTNNA1-201ENST00000302763 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms