RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
SMG8-201ENST00000300917 A0A1B0GU69 56 aa7.7□□□□□ -1.18
SMG8-201ENST00000300917 XP32Q5T750 250 aa7.69□□□□□ -1.18
SMG8-201ENST00000300917 KRTAP3-1Q9BYR8 98 aa7.69□□□□□ -1.18
SMG8-201ENST00000300917 ABCA13Q86UQ4 5058 aa7.67□□□□□ -1.18
SMG8-201ENST00000300917 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
SMG8-201ENST00000300917 LRP2P98164 4655 aa7.64□□□□□ -1.19
SMG8-201ENST00000300917 LPAP08519 4548 aa7.64□□□□□ -1.19
SMG8-201ENST00000300917 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
SMG8-201ENST00000300917 COX6B2Q6YFQ2 88 aa7.56□□□□□ -1.2
SMG8-201ENST00000300917 HERC2O95714 4834 aa7.52□□□□□ -1.21
SMG8-201ENST00000300917 J3QL48 77 aa7.49□□□□□ -1.21
SMG8-201ENST00000300917 UQCR11O14957 56 aa7.46□□□□□ -1.22
SMG8-201ENST00000300917 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.22
SMG8-201ENST00000300917 ROMO1P60602 79 aa7.46□□□□□ -1.22
SMG8-201ENST00000300917 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
SMG8-201ENST00000300917 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
SMG8-201ENST00000300917 S4R3F8 94 aa7.36□□□□□ -1.23
SMG8-201ENST00000300917 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
SMG8-201ENST00000300917 A0A1B0GU33 70 aa7.34□□□□□ -1.23
SMG8-201ENST00000300917 BIRC6Q9NR09 4857 aa7.34□□□□□ -1.24
SMG8-201ENST00000300917 P0C880 135 aa7.32□□□□□ -1.24
SMG8-201ENST00000300917 H0YAA0 97 aa7.32□□□□□ -1.24
SMG8-201ENST00000300917 H1FX-AS1Q4G0G2 97 aa7.29□□□□□ -1.24
SMG8-201ENST00000300917 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
SMG8-201ENST00000300917 HERC1Q15751 4861 aa7.27□□□□□ -1.25
SMG8-201ENST00000300917 MUC2Q02817 5179 aa7.27□□□□□ -1.25
SMG8-201ENST00000300917 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
SMG8-201ENST00000300917 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
SMG8-201ENST00000300917 A0A0D9SG42 100 aa7.23□□□□□ -1.25
SMG8-201ENST00000300917 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
SMG8-201ENST00000300917 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
SMG8-201ENST00000300917 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
SMG8-201ENST00000300917 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
SMG8-201ENST00000300917 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
SMG8-201ENST00000300917 LUZP6Q538Z0 58 aa7.14□□□□□ -1.27
SMG8-201ENST00000300917 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
SMG8-201ENST00000300917 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
SMG8-201ENST00000300917 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
SMG8-201ENST00000300917 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
SMG8-201ENST00000300917 K7ERS5 55 aa6.99□□□□□ -1.29
SMG8-201ENST00000300917 RNF213Q63HN8 5207 aa6.94□□□□□ -1.3
SMG8-201ENST00000300917 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
SMG8-201ENST00000300917 M0QZ58 72 aa6.91□□□□□ -1.3
SMG8-201ENST00000300917 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
SMG8-201ENST00000300917 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
SMG8-201ENST00000300917 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
SMG8-201ENST00000300917 R4GN34 69 aa6.88□□□□□ -1.31
SMG8-201ENST00000300917 UBR4Q5T4S7 5183 aa6.87□□□□□ -1.31
SMG8-201ENST00000300917 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
SMG8-201ENST00000300917 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
SMG8-201ENST00000300917 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
SMG8-201ENST00000300917 M0R2T5 61 aa6.7□□□□□ -1.34
SMG8-201ENST00000300917 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
SMG8-201ENST00000300917 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
SMG8-201ENST00000300917 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
SMG8-201ENST00000300917 MT1HP80294 61 aa6.52□□□□□ -1.36
SMG8-201ENST00000300917 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
SMG8-201ENST00000300917 MT1FP04733 61 aa6.37□□□□□ -1.39
SMG8-201ENST00000300917 MT2AP02795 61 aa6.35□□□□□ -1.39
SMG8-201ENST00000300917 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
SMG8-201ENST00000300917 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
SMG8-201ENST00000300917 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
SMG8-201ENST00000300917 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
SMG8-201ENST00000300917 TNP1P09430 55 aa6.14□□□□□ -1.43
SMG8-201ENST00000300917 USH2AO75445 5202 aa6.08□□□□□ -1.44
SMG8-201ENST00000300917 MT1BP07438 61 aa6.05□□□□□ -1.44
SMG8-201ENST00000300917 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
SMG8-201ENST00000300917 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
SMG8-201ENST00000300917 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
SMG8-201ENST00000300917 MT1XP80297 61 aa5.94□□□□□ -1.46
SMG8-201ENST00000300917 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
SMG8-201ENST00000300917 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
SMG8-201ENST00000300917 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
SMG8-201ENST00000300917 LCE2BO14633 110 aa5.92□□□□□ -1.46
SMG8-201ENST00000300917 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
SMG8-201ENST00000300917 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
SMG8-201ENST00000300917 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
SMG8-201ENST00000300917 KMT2DO14686 5537 aa5.8□□□□□ -1.48
SMG8-201ENST00000300917 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
SMG8-201ENST00000300917 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
SMG8-201ENST00000300917 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
SMG8-201ENST00000300917 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
SMG8-201ENST00000300917 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
SMG8-201ENST00000300917 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
SMG8-201ENST00000300917 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
SMG8-201ENST00000300917 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
SMG8-201ENST00000300917 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
SMG8-201ENST00000300917 INE1O15225 51 aa5.34□□□□□ -1.55
SMG8-201ENST00000300917 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
SMG8-201ENST00000300917 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
SMG8-201ENST00000300917 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
SMG8-201ENST00000300917 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
SMG8-201ENST00000300917 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
SMG8-201ENST00000300917 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
SMG8-201ENST00000300917 MT1EP04732 61 aa5.15□□□□□ -1.59
SMG8-201ENST00000300917 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
SMG8-201ENST00000300917 MT1LQ93083 61 aa5.1□□□□□ -1.59
SMG8-201ENST00000300917 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
SMG8-201ENST00000300917 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms