RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
NFIL3-201ENST00000297689 SEC61GP60059 68 aa10.37□□□□□ -0.75
NFIL3-201ENST00000297689 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
NFIL3-201ENST00000297689 ABCA13Q86UQ4 5058 aa10.32□□□□□ -0.76
NFIL3-201ENST00000297689 RPL37P61927 97 aaKnown RBP10.29□□□□□ -0.76
NFIL3-201ENST00000297689 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.76
NFIL3-201ENST00000297689 H0YAA0 97 aa10.24□□□□□ -0.77
NFIL3-201ENST00000297689 XP32Q5T750 250 aa10.24□□□□□ -0.77
NFIL3-201ENST00000297689 A0A1B0GU33 70 aa10.19□□□□□ -0.78
NFIL3-201ENST00000297689 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
NFIL3-201ENST00000297689 ADM2Q7Z4H4 148 aa10.16□□□□□ -0.78
NFIL3-201ENST00000297689 KRTAP3-3Q9BYR6 98 aa10.15□□□□□ -0.78
NFIL3-201ENST00000297689 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
NFIL3-201ENST00000297689 PCLOQ9Y6V0 5065 aa10.09□□□□□ -0.79
NFIL3-201ENST00000297689 KRTAP10-6P60371 365 aaPredicted RBP10.02□□□□□ -0.81
NFIL3-201ENST00000297689 KRTAP3-2Q9BYR7 98 aa9.98□□□□□ -0.81
NFIL3-201ENST00000297689 J3QL48 77 aa9.96□□□□□ -0.81
NFIL3-201ENST00000297689 TPRXLQ17RH7 258 aa9.96□□□□□ -0.81
NFIL3-201ENST00000297689 S4R3F8 94 aa9.95□□□□□ -0.82
NFIL3-201ENST00000297689 LPAP08519 4548 aa9.93□□□□□ -0.82
NFIL3-201ENST00000297689 LRP2P98164 4655 aa9.93□□□□□ -0.82
NFIL3-201ENST00000297689 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
NFIL3-201ENST00000297689 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
NFIL3-201ENST00000297689 P0C880 135 aa9.78□□□□□ -0.84
NFIL3-201ENST00000297689 HERC1Q15751 4861 aa9.78□□□□□ -0.84
NFIL3-201ENST00000297689 LINC01554Q52M75 96 aa9.78□□□□□ -0.84
NFIL3-201ENST00000297689 K7ERS5 55 aa9.76□□□□□ -0.85
NFIL3-201ENST00000297689 KRTAP25-1Q3LHN0 102 aa9.67□□□□□ -0.86
NFIL3-201ENST00000297689 A0A0D9SG42 100 aa9.63□□□□□ -0.87
NFIL3-201ENST00000297689 HMCN2Q8NDA2 5059 aa9.62□□□□□ -0.87
NFIL3-201ENST00000297689 MUC17Q685J3 4493 aa9.61□□□□□ -0.87
NFIL3-201ENST00000297689 ROMO1P60602 79 aa9.59□□□□□ -0.87
NFIL3-201ENST00000297689 SEC61BP60468 96 aaKnown RBP9.57□□□□□ -0.88
NFIL3-201ENST00000297689 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
NFIL3-201ENST00000297689 KRTAP12-2P59991 146 aa9.5□□□□□ -0.89
NFIL3-201ENST00000297689 M0QZ58 72 aa9.49□□□□□ -0.89
NFIL3-201ENST00000297689 KRTAP12-1P59990 96 aa9.48□□□□□ -0.89
NFIL3-201ENST00000297689 CRIPTQ9P021 101 aa9.46□□□□□ -0.89
NFIL3-201ENST00000297689 KRTAP19-2Q3LHN2 52 aa9.37□□□□□ -0.91
NFIL3-201ENST00000297689 SPINT4Q6UDR6 99 aa9.32□□□□□ -0.92
NFIL3-201ENST00000297689 MUC2Q02817 5179 aa9.27□□□□□ -0.93
NFIL3-201ENST00000297689 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
NFIL3-201ENST00000297689 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.93
NFIL3-201ENST00000297689 R4GN34 69 aa9.21□□□□□ -0.93
NFIL3-201ENST00000297689 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
NFIL3-201ENST00000297689 RNF213Q63HN8 5207 aa9.13□□□□□ -0.95
NFIL3-201ENST00000297689 FLGP20930 4061 aaPredicted RBP9.08□□□□□ -0.96
NFIL3-201ENST00000297689 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
NFIL3-201ENST00000297689 FAT4Q6V0I7 4981 aa8.87□□□□□ -0.99
NFIL3-201ENST00000297689 KRTAP15-1Q3LI76 137 aa8.82□□□□□ -1
NFIL3-201ENST00000297689 MT1HP80294 61 aa8.71□□□□□ -1.02
NFIL3-201ENST00000297689 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
NFIL3-201ENST00000297689 H3BS24 57 aa8.62□□□□□ -1.03
NFIL3-201ENST00000297689 M0R2T5 61 aa8.58□□□□□ -1.04
NFIL3-201ENST00000297689 PP632Q6XCG6 107 aa8.57□□□□□ -1.04
NFIL3-201ENST00000297689 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
NFIL3-201ENST00000297689 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
NFIL3-201ENST00000297689 MT2AP02795 61 aa8.47□□□□□ -1.05
NFIL3-201ENST00000297689 KRTAP9-8Q9BYQ0 159 aa8.46□□□□□ -1.05
NFIL3-201ENST00000297689 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
NFIL3-201ENST00000297689 MT1FP04733 61 aa8.45□□□□□ -1.06
NFIL3-201ENST00000297689 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
NFIL3-201ENST00000297689 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
NFIL3-201ENST00000297689 TNP1P09430 55 aa8.41□□□□□ -1.06
NFIL3-201ENST00000297689 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
NFIL3-201ENST00000297689 KRTAP10-10P60014 251 aa8.36□□□□□ -1.07
NFIL3-201ENST00000297689 KRTAP19-8Q3LI54 63 aa8.22□□□□□ -1.09
NFIL3-201ENST00000297689 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
NFIL3-201ENST00000297689 MT1BP07438 61 aa8.09□□□□□ -1.11
NFIL3-201ENST00000297689 SPRR5A0A1B0GTR4 108 aa8.04□□□□□ -1.12
NFIL3-201ENST00000297689 KRTAP9-2Q9BYQ4 174 aa8.04□□□□□ -1.12
NFIL3-201ENST00000297689 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
NFIL3-201ENST00000297689 KRTAP10-5P60370 271 aa8□□□□□ -1.13
NFIL3-201ENST00000297689 MT1XP80297 61 aa7.99□□□□□ -1.13
NFIL3-201ENST00000297689 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
NFIL3-201ENST00000297689 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.15
NFIL3-201ENST00000297689 LCE2BO14633 110 aa7.88□□□□□ -1.15
NFIL3-201ENST00000297689 LCE2DQ5TA82 110 aaPredicted RBP7.83□□□□□ -1.16
NFIL3-201ENST00000297689 USH2AO75445 5202 aa7.76□□□□□ -1.17
NFIL3-201ENST00000297689 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
NFIL3-201ENST00000297689 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
NFIL3-201ENST00000297689 KRTAP10-7P60409 375 aaPredicted RBP7.72□□□□□ -1.17
NFIL3-201ENST00000297689 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
NFIL3-201ENST00000297689 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
NFIL3-201ENST00000297689 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
NFIL3-201ENST00000297689 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
NFIL3-201ENST00000297689 SSPOA2VEC9 5147 aa7.52□□□□□ -1.21
NFIL3-201ENST00000297689 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
NFIL3-201ENST00000297689 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
NFIL3-201ENST00000297689 KRTAP19-5Q3LI72 72 aa7.37□□□□□ -1.23
NFIL3-201ENST00000297689 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
NFIL3-201ENST00000297689 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
NFIL3-201ENST00000297689 KMT2DO14686 5537 aa7.25□□□□□ -1.25
NFIL3-201ENST00000297689 LCE3CQ5T5A8 94 aa7.21□□□□□ -1.26
NFIL3-201ENST00000297689 FCGBPQ9Y6R7 5405 aaPredicted RBP7.2□□□□□ -1.26
NFIL3-201ENST00000297689 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.27
NFIL3-201ENST00000297689 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
NFIL3-201ENST00000297689 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
NFIL3-201ENST00000297689 KRTAP9-7A8MTY7 169 aa6.97□□□□□ -1.29
NFIL3-201ENST00000297689 KRTAP9-6A8MVA2 160 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms