RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 KRTAP25-1Q3LHN0 102 aa10.24□□□□□ -0.77
NKX6-1-201ENST00000295886 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
NKX6-1-201ENST00000295886 Q5VSD8 79 aa10.14□□□□□ -0.79
NKX6-1-201ENST00000295886 KRTAP10-8P60410 259 aa10.13□□□□□ -0.79
NKX6-1-201ENST00000295886 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
NKX6-1-201ENST00000295886 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
NKX6-1-201ENST00000295886 ROMO1P60602 79 aa10.07□□□□□ -0.8
NKX6-1-201ENST00000295886 K7ERS5 55 aa10.05□□□□□ -0.8
NKX6-1-201ENST00000295886 RPL37P61927 97 aaKnown RBP10.05□□□□□ -0.8
NKX6-1-201ENST00000295886 XP32Q5T750 250 aa10.05□□□□□ -0.8
NKX6-1-201ENST00000295886 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
NKX6-1-201ENST00000295886 RYR3Q15413 4870 aa10.04□□□□□ -0.8
NKX6-1-201ENST00000295886 RYR1P21817 5038 aa9.97□□□□□ -0.81
NKX6-1-201ENST00000295886 KRTAP10-6P60371 365 aaPredicted RBP9.97□□□□□ -0.81
NKX6-1-201ENST00000295886 KIAA1109Q2LD37 5005 aa9.97□□□□□ -0.81
NKX6-1-201ENST00000295886 LPAP08519 4548 aa9.96□□□□□ -0.82
NKX6-1-201ENST00000295886 KRTAP13-4Q3LI77 160 aa9.95□□□□□ -0.82
NKX6-1-201ENST00000295886 A0A0D9SG42 100 aa9.93□□□□□ -0.82
NKX6-1-201ENST00000295886 S4R3F8 94 aa9.92□□□□□ -0.82
NKX6-1-201ENST00000295886 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
NKX6-1-201ENST00000295886 MT1HL1P0DM35 61 aa9.86□□□□□ -0.83
NKX6-1-201ENST00000295886 P0C880 135 aa9.85□□□□□ -0.83
NKX6-1-201ENST00000295886 LRP2P98164 4655 aa9.84□□□□□ -0.83
NKX6-1-201ENST00000295886 TPRXLQ17RH7 258 aa9.71□□□□□ -0.86
NKX6-1-201ENST00000295886 EPPK1P58107 5090 aaKnown RBP9.69□□□□□ -0.86
NKX6-1-201ENST00000295886 SPINT4Q6UDR6 99 aa9.68□□□□□ -0.86
NKX6-1-201ENST00000295886 ABCA13Q86UQ4 5058 aa9.67□□□□□ -0.86
NKX6-1-201ENST00000295886 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
NKX6-1-201ENST00000295886 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
NKX6-1-201ENST00000295886 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
NKX6-1-201ENST00000295886 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
NKX6-1-201ENST00000295886 KRTAP15-1Q3LI76 137 aa9.41□□□□□ -0.9
NKX6-1-201ENST00000295886 NDUFAF8A1L188 74 aa9.39□□□□□ -0.91
NKX6-1-201ENST00000295886 BIRC6Q9NR09 4857 aa9.38□□□□□ -0.91
NKX6-1-201ENST00000295886 M0QZ58 72 aa9.35□□□□□ -0.91
NKX6-1-201ENST00000295886 MUC17Q685J3 4493 aa9.3□□□□□ -0.92
NKX6-1-201ENST00000295886 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
NKX6-1-201ENST00000295886 R4GN34 69 aa9.24□□□□□ -0.93
NKX6-1-201ENST00000295886 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
NKX6-1-201ENST00000295886 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
NKX6-1-201ENST00000295886 MUC2Q02817 5179 aa9.16□□□□□ -0.94
NKX6-1-201ENST00000295886 HERC2O95714 4834 aa9.13□□□□□ -0.95
NKX6-1-201ENST00000295886 J3QL48 77 aa9.13□□□□□ -0.95
NKX6-1-201ENST00000295886 KRTAP19-2Q3LHN2 52 aa9.01□□□□□ -0.97
NKX6-1-201ENST00000295886 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
NKX6-1-201ENST00000295886 HERC1Q15751 4861 aa8.81□□□□□ -1
NKX6-1-201ENST00000295886 CAMK2N1Q7Z7J9 78 aa8.8□□□□□ -1
NKX6-1-201ENST00000295886 FLGP20930 4061 aaPredicted RBP8.79□□□□□ -1
NKX6-1-201ENST00000295886 PCLOQ9Y6V0 5065 aa8.76□□□□□ -1.01
NKX6-1-201ENST00000295886 FAT4Q6V0I7 4981 aa8.69□□□□□ -1.02
NKX6-1-201ENST00000295886 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
NKX6-1-201ENST00000295886 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
NKX6-1-201ENST00000295886 LUZP6Q538Z0 58 aa8.56□□□□□ -1.04
NKX6-1-201ENST00000295886 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
NKX6-1-201ENST00000295886 RNF213Q63HN8 5207 aa8.46□□□□□ -1.06
NKX6-1-201ENST00000295886 TNP1P09430 55 aa8.4□□□□□ -1.07
NKX6-1-201ENST00000295886 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
NKX6-1-201ENST00000295886 M0R2T5 61 aa8.36□□□□□ -1.07
NKX6-1-201ENST00000295886 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
NKX6-1-201ENST00000295886 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
NKX6-1-201ENST00000295886 SPRR2GQ9BYE4 73 aa8.27□□□□□ -1.09
NKX6-1-201ENST00000295886 MT1HP80294 61 aa8.24□□□□□ -1.09
NKX6-1-201ENST00000295886 MT1FP04733 61 aa8.16□□□□□ -1.1
NKX6-1-201ENST00000295886 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
NKX6-1-201ENST00000295886 MT2AP02795 61 aa8.13□□□□□ -1.11
NKX6-1-201ENST00000295886 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
NKX6-1-201ENST00000295886 SPRR5A0A1B0GTR4 108 aa8.11□□□□□ -1.11
NKX6-1-201ENST00000295886 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
NKX6-1-201ENST00000295886 LCE3AQ5TA76 89 aa8.04□□□□□ -1.12
NKX6-1-201ENST00000295886 MT1BP07438 61 aa7.87□□□□□ -1.15
NKX6-1-201ENST00000295886 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
NKX6-1-201ENST00000295886 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
NKX6-1-201ENST00000295886 MT1XP80297 61 aa7.82□□□□□ -1.16
NKX6-1-201ENST00000295886 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
NKX6-1-201ENST00000295886 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
NKX6-1-201ENST00000295886 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
NKX6-1-201ENST00000295886 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
NKX6-1-201ENST00000295886 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
NKX6-1-201ENST00000295886 USH2AO75445 5202 aa7.58□□□□□ -1.2
NKX6-1-201ENST00000295886 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
NKX6-1-201ENST00000295886 KMT2DO14686 5537 aa7.47□□□□□ -1.21
NKX6-1-201ENST00000295886 LCE2BO14633 110 aa7.45□□□□□ -1.22
NKX6-1-201ENST00000295886 INE1O15225 51 aa7.44□□□□□ -1.22
NKX6-1-201ENST00000295886 LCE2AQ5TA79 106 aaPredicted RBP7.35□□□□□ -1.23
NKX6-1-201ENST00000295886 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
NKX6-1-201ENST00000295886 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
NKX6-1-201ENST00000295886 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
NKX6-1-201ENST00000295886 LCE3CQ5T5A8 94 aa7.14□□□□□ -1.27
NKX6-1-201ENST00000295886 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
NKX6-1-201ENST00000295886 KRTAP9-6A8MVA2 160 aa6.99□□□□□ -1.29
NKX6-1-201ENST00000295886 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
NKX6-1-201ENST00000295886 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
NKX6-1-201ENST00000295886 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
NKX6-1-201ENST00000295886 FSIP2Q5CZC0 6907 aa6.92□□□□□ -1.3
NKX6-1-201ENST00000295886 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
NKX6-1-201ENST00000295886 MT1LQ93083 61 aa6.75□□□□□ -1.33
NKX6-1-201ENST00000295886 MT1EP04732 61 aa6.75□□□□□ -1.33
NKX6-1-201ENST00000295886 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
NKX6-1-201ENST00000295886 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
NKX6-1-201ENST00000295886 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms