RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 COX6B2Q6YFQ2 88 aa11.19□□□□□ -0.62
RNF149-201ENST00000295317 UQCR11O14957 56 aa11.1□□□□□ -0.63
RNF149-201ENST00000295317 MIR22HGQ0VDD5 57 aa11.08□□□□□ -0.64
RNF149-201ENST00000295317 A6NN06 94 aa11.07□□□□□ -0.64
RNF149-201ENST00000295317 SPATA8Q6RVD6 105 aa11.04□□□□□ -0.64
RNF149-201ENST00000295317 KTN1-AS1Q86SY8 53 aa10.98□□□□□ -0.65
RNF149-201ENST00000295317 HERC2O95714 4834 aa10.98□□□□□ -0.65
RNF149-201ENST00000295317 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
RNF149-201ENST00000295317 TPRXLQ17RH7 258 aa10.93□□□□□ -0.66
RNF149-201ENST00000295317 H0YAA0 97 aa10.92□□□□□ -0.66
RNF149-201ENST00000295317 A0A1B0GU33 70 aa10.89□□□□□ -0.67
RNF149-201ENST00000295317 S4R3F8 94 aa10.85□□□□□ -0.67
RNF149-201ENST00000295317 H1FX-AS1Q4G0G2 97 aa10.83□□□□□ -0.68
RNF149-201ENST00000295317 RBM12B-AS1Q9P1G2 102 aa10.8□□□□□ -0.68
RNF149-201ENST00000295317 J3QL48 77 aa10.78□□□□□ -0.68
RNF149-201ENST00000295317 ADM2Q7Z4H4 148 aa10.77□□□□□ -0.69
RNF149-201ENST00000295317 KRTAP10-6P60371 365 aaPredicted RBP10.75□□□□□ -0.69
RNF149-201ENST00000295317 PRAC1Q96KF2 57 aa10.72□□□□□ -0.69
RNF149-201ENST00000295317 KRTAP3-2Q9BYR7 98 aa10.7□□□□□ -0.7
RNF149-201ENST00000295317 BIRC6Q9NR09 4857 aa10.7□□□□□ -0.7
RNF149-201ENST00000295317 MUC2Q02817 5179 aa10.69□□□□□ -0.7
RNF149-201ENST00000295317 P0C880 135 aa10.67□□□□□ -0.7
RNF149-201ENST00000295317 KRTAP13-4Q3LI77 160 aa10.67□□□□□ -0.7
RNF149-201ENST00000295317 MUC17Q685J3 4493 aa10.63□□□□□ -0.71
RNF149-201ENST00000295317 KRTAP4-1Q9BYQ7 146 aa10.63□□□□□ -0.71
RNF149-201ENST00000295317 HERC1Q15751 4861 aa10.6□□□□□ -0.71
RNF149-201ENST00000295317 PCLOQ9Y6V0 5065 aa10.59□□□□□ -0.71
RNF149-201ENST00000295317 A0A0D9SG42 100 aa10.59□□□□□ -0.71
RNF149-201ENST00000295317 SEC61BP60468 96 aaKnown RBP10.51□□□□□ -0.73
RNF149-201ENST00000295317 CSAG1Q6PB30 78 aa10.49□□□□□ -0.73
RNF149-201ENST00000295317 K7ERS5 55 aa10.31□□□□□ -0.76
RNF149-201ENST00000295317 CRIPTQ9P021 101 aa10.31□□□□□ -0.76
RNF149-201ENST00000295317 HMCN2Q8NDA2 5059 aa10.29□□□□□ -0.76
RNF149-201ENST00000295317 KRTAP19-2Q3LHN2 52 aa10.28□□□□□ -0.76
RNF149-201ENST00000295317 KRTAP12-2P59991 146 aa10.26□□□□□ -0.77
RNF149-201ENST00000295317 LINC01554Q52M75 96 aa10.21□□□□□ -0.78
RNF149-201ENST00000295317 SPINT4Q6UDR6 99 aa10.21□□□□□ -0.78
RNF149-201ENST00000295317 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
RNF149-201ENST00000295317 FAT4Q6V0I7 4981 aa10.15□□□□□ -0.78
RNF149-201ENST00000295317 KRTAP12-1P59990 96 aa10.15□□□□□ -0.78
RNF149-201ENST00000295317 M0QZ58 72 aa10.14□□□□□ -0.79
RNF149-201ENST00000295317 FLGP20930 4061 aaPredicted RBP10.1□□□□□ -0.79
RNF149-201ENST00000295317 RNF213Q63HN8 5207 aa10.1□□□□□ -0.79
RNF149-201ENST00000295317 ROMO1P60602 79 aa10.09□□□□□ -0.79
RNF149-201ENST00000295317 R4GN34 69 aa10.08□□□□□ -0.8
RNF149-201ENST00000295317 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
RNF149-201ENST00000295317 KRTAP25-1Q3LHN0 102 aa10.04□□□□□ -0.8
RNF149-201ENST00000295317 C10orf95Q9H7T3 257 aa9.94□□□□□ -0.82
RNF149-201ENST00000295317 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
RNF149-201ENST00000295317 H3BS24 57 aa9.7□□□□□ -0.86
RNF149-201ENST00000295317 M0R2T5 61 aa9.63□□□□□ -0.87
RNF149-201ENST00000295317 MT1HP80294 61 aa9.58□□□□□ -0.88
RNF149-201ENST00000295317 CAMK2N1Q7Z7J9 78 aa9.54□□□□□ -0.88
RNF149-201ENST00000295317 KRTAP19-1Q8IUB9 90 aa9.38□□□□□ -0.91
RNF149-201ENST00000295317 MT1FP04733 61 aa9.37□□□□□ -0.91
RNF149-201ENST00000295317 MT2AP02795 61 aa9.34□□□□□ -0.91
RNF149-201ENST00000295317 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
RNF149-201ENST00000295317 KRTAP9-8Q9BYQ0 159 aa9.31□□□□□ -0.92
RNF149-201ENST00000295317 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
RNF149-201ENST00000295317 PLAC4Q8WY50 150 aa9.15□□□□□ -0.94
RNF149-201ENST00000295317 KRTAP15-1Q3LI76 137 aa9.08□□□□□ -0.96
RNF149-201ENST00000295317 TNP1P09430 55 aa9.05□□□□□ -0.96
RNF149-201ENST00000295317 NDUFAF8A1L188 74 aa8.94□□□□□ -0.98
RNF149-201ENST00000295317 MT1BP07438 61 aa8.94□□□□□ -0.98
RNF149-201ENST00000295317 KRTAP19-8Q3LI54 63 aa8.92□□□□□ -0.98
RNF149-201ENST00000295317 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
RNF149-201ENST00000295317 KRTAP9-3Q9BYQ3 159 aa8.92□□□□□ -0.98
RNF149-201ENST00000295317 USH2AO75445 5202 aa8.89□□□□□ -0.99
RNF149-201ENST00000295317 KRTAP10-5P60370 271 aa8.79□□□□□ -1
RNF149-201ENST00000295317 MT1XP80297 61 aa8.79□□□□□ -1
RNF149-201ENST00000295317 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
RNF149-201ENST00000295317 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
RNF149-201ENST00000295317 LCE2BO14633 110 aa8.69□□□□□ -1.02
RNF149-201ENST00000295317 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.02
RNF149-201ENST00000295317 KRTAP10-7P60409 375 aaPredicted RBP8.59□□□□□ -1.03
RNF149-201ENST00000295317 KMT2DO14686 5537 aa8.54□□□□□ -1.04
RNF149-201ENST00000295317 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
RNF149-201ENST00000295317 KRTAP8-1Q8IUC2 63 aa8.39□□□□□ -1.07
RNF149-201ENST00000295317 PRO2289Q9P1D8 64 aa8.38□□□□□ -1.07
RNF149-201ENST00000295317 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
RNF149-201ENST00000295317 A0A0A0MQY5 61 aa8.32□□□□□ -1.08
RNF149-201ENST00000295317 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
RNF149-201ENST00000295317 KRTAP12-3P60328 96 aa8.29□□□□□ -1.08
RNF149-201ENST00000295317 SPRR5A0A1B0GTR4 108 aa8.25□□□□□ -1.09
RNF149-201ENST00000295317 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
RNF149-201ENST00000295317 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
RNF149-201ENST00000295317 SSPOA2VEC9 5147 aa8.19□□□□□ -1.1
RNF149-201ENST00000295317 KRTAP19-5Q3LI72 72 aa8.13□□□□□ -1.11
RNF149-201ENST00000295317 KRTAP19-7Q3SYF9 63 aa7.85□□□□□ -1.15
RNF149-201ENST00000295317 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
RNF149-201ENST00000295317 LCE3CQ5T5A8 94 aa7.76□□□□□ -1.17
RNF149-201ENST00000295317 KRTAP4-7Q9BYR0 210 aa7.74□□□□□ -1.17
RNF149-201ENST00000295317 FCGBPQ9Y6R7 5405 aaPredicted RBP7.71□□□□□ -1.17
RNF149-201ENST00000295317 MUC12Q9UKN1 5478 aa7.62□□□□□ -1.19
RNF149-201ENST00000295317 MT1EP04732 61 aa7.61□□□□□ -1.19
RNF149-201ENST00000295317 KRTAP9-6A8MVA2 160 aa7.59□□□□□ -1.19
RNF149-201ENST00000295317 MT1LQ93083 61 aa7.56□□□□□ -1.2
RNF149-201ENST00000295317 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
RNF149-201ENST00000295317 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
RNF149-201ENST00000295317 KRTAP4-3Q9BYR4 195 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms