RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 Q5VV11 94 aa4.92□□□□□ -1.62
PDPN-201ENST00000294489 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
PDPN-201ENST00000294489 DMBT1Q9UGM3 2413 aaPredicted RBP4.9□□□□□ -1.63
PDPN-201ENST00000294489 ABCA13Q86UQ4 5058 aa4.89□□□□□ -1.63
PDPN-201ENST00000294489 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
PDPN-201ENST00000294489 SPINK7P58062 85 aa4.88□□□□□ -1.63
PDPN-201ENST00000294489 XP32Q5T750 250 aa4.86□□□□□ -1.63
PDPN-201ENST00000294489 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
PDPN-201ENST00000294489 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
PDPN-201ENST00000294489 LCE2BO14633 110 aa4.84□□□□□ -1.63
PDPN-201ENST00000294489 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
PDPN-201ENST00000294489 CDC42SE1Q9NRR8 79 aa4.84□□□□□ -1.63
PDPN-201ENST00000294489 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
PDPN-201ENST00000294489 A0A1B0GU69 56 aa4.78□□□□□ -1.64
PDPN-201ENST00000294489 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
PDPN-201ENST00000294489 CSAG1Q6PB30 78 aa4.71□□□□□ -1.66
PDPN-201ENST00000294489 LPAP08519 4548 aa4.71□□□□□ -1.66
PDPN-201ENST00000294489 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
PDPN-201ENST00000294489 ROMO1P60602 79 aa4.7□□□□□ -1.66
PDPN-201ENST00000294489 PCLOQ9Y6V0 5065 aa4.69□□□□□ -1.66
PDPN-201ENST00000294489 LRP2P98164 4655 aa4.69□□□□□ -1.66
PDPN-201ENST00000294489 MUC17Q685J3 4493 aa4.68□□□□□ -1.66
PDPN-201ENST00000294489 UQCR11O14957 56 aa4.67□□□□□ -1.66
PDPN-201ENST00000294489 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
PDPN-201ENST00000294489 S4R3F8 94 aa4.63□□□□□ -1.67
PDPN-201ENST00000294489 SPATA8Q6RVD6 105 aa4.62□□□□□ -1.67
PDPN-201ENST00000294489 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
PDPN-201ENST00000294489 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
PDPN-201ENST00000294489 KRTAP4-1Q9BYQ7 146 aa4.59□□□□□ -1.68
PDPN-201ENST00000294489 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
PDPN-201ENST00000294489 A0A1B0GU33 70 aa4.57□□□□□ -1.68
PDPN-201ENST00000294489 HERC1Q15751 4861 aa4.55□□□□□ -1.68
PDPN-201ENST00000294489 P0C880 135 aa4.55□□□□□ -1.68
PDPN-201ENST00000294489 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
PDPN-201ENST00000294489 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
PDPN-201ENST00000294489 K7ERS5 55 aa4.52□□□□□ -1.69
PDPN-201ENST00000294489 H0YAA0 97 aa4.51□□□□□ -1.69
PDPN-201ENST00000294489 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
PDPN-201ENST00000294489 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
PDPN-201ENST00000294489 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
PDPN-201ENST00000294489 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
PDPN-201ENST00000294489 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
PDPN-201ENST00000294489 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
PDPN-201ENST00000294489 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
PDPN-201ENST00000294489 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
PDPN-201ENST00000294489 A0A0D9SG42 100 aa4.37□□□□□ -1.71
PDPN-201ENST00000294489 M0QZ58 72 aa4.35□□□□□ -1.71
PDPN-201ENST00000294489 MUC2Q02817 5179 aa4.33□□□□□ -1.72
PDPN-201ENST00000294489 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
PDPN-201ENST00000294489 RNF213Q63HN8 5207 aa4.31□□□□□ -1.72
PDPN-201ENST00000294489 R4GN34 69 aa4.29□□□□□ -1.72
PDPN-201ENST00000294489 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.72
PDPN-201ENST00000294489 MT1HP80294 61 aa4.25□□□□□ -1.73
PDPN-201ENST00000294489 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
PDPN-201ENST00000294489 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
PDPN-201ENST00000294489 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
PDPN-201ENST00000294489 M0R2T5 61 aa4.16□□□□□ -1.74
PDPN-201ENST00000294489 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
PDPN-201ENST00000294489 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
PDPN-201ENST00000294489 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
PDPN-201ENST00000294489 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
PDPN-201ENST00000294489 MT2AP02795 61 aa4.1□□□□□ -1.75
PDPN-201ENST00000294489 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
PDPN-201ENST00000294489 MT1FP04733 61 aa4.07□□□□□ -1.76
PDPN-201ENST00000294489 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
PDPN-201ENST00000294489 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
PDPN-201ENST00000294489 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
PDPN-201ENST00000294489 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
PDPN-201ENST00000294489 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
PDPN-201ENST00000294489 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
PDPN-201ENST00000294489 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
PDPN-201ENST00000294489 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
PDPN-201ENST00000294489 MT1BP07438 61 aa3.89□□□□□ -1.79
PDPN-201ENST00000294489 TNP1P09430 55 aa3.87□□□□□ -1.79
PDPN-201ENST00000294489 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
PDPN-201ENST00000294489 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
PDPN-201ENST00000294489 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
PDPN-201ENST00000294489 MT1XP80297 61 aa3.77□□□□□ -1.81
PDPN-201ENST00000294489 USH2AO75445 5202 aa3.66□□□□□ -1.82
PDPN-201ENST00000294489 LCE3AQ5TA76 89 aa3.65□□□□□ -1.82
PDPN-201ENST00000294489 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
PDPN-201ENST00000294489 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
PDPN-201ENST00000294489 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
PDPN-201ENST00000294489 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
PDPN-201ENST00000294489 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
PDPN-201ENST00000294489 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
PDPN-201ENST00000294489 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
PDPN-201ENST00000294489 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
PDPN-201ENST00000294489 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
PDPN-201ENST00000294489 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
PDPN-201ENST00000294489 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
PDPN-201ENST00000294489 INE1O15225 51 aa3.5□□□□□ -1.85
PDPN-201ENST00000294489 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
PDPN-201ENST00000294489 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
PDPN-201ENST00000294489 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
PDPN-201ENST00000294489 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
PDPN-201ENST00000294489 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
PDPN-201ENST00000294489 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
PDPN-201ENST00000294489 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
PDPN-201ENST00000294489 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms