RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 COX6B2Q6YFQ2 88 aa9.19□□□□□ -0.94
SYVN1-201ENST00000294256 A0A1B0GU33 70 aa9.15□□□□□ -0.94
SYVN1-201ENST00000294256 H0YAA0 97 aa9.15□□□□□ -0.94
SYVN1-201ENST00000294256 XP32Q5T750 250 aa9.13□□□□□ -0.95
SYVN1-201ENST00000294256 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
SYVN1-201ENST00000294256 EPPK1P58107 5090 aaKnown RBP9.08□□□□□ -0.96
SYVN1-201ENST00000294256 LPAP08519 4548 aa9.07□□□□□ -0.96
SYVN1-201ENST00000294256 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
SYVN1-201ENST00000294256 LRP2P98164 4655 aa9.02□□□□□ -0.97
SYVN1-201ENST00000294256 MT1HL1P0DM35 61 aa9□□□□□ -0.97
SYVN1-201ENST00000294256 CSAG1Q6PB30 78 aa8.99□□□□□ -0.97
SYVN1-201ENST00000294256 A0A0D9SG42 100 aa8.97□□□□□ -0.97
SYVN1-201ENST00000294256 KRTAP3-3Q9BYR6 98 aa8.95□□□□□ -0.98
SYVN1-201ENST00000294256 S4R3F8 94 aa8.95□□□□□ -0.98
SYVN1-201ENST00000294256 ABCA13Q86UQ4 5058 aa8.95□□□□□ -0.98
SYVN1-201ENST00000294256 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
SYVN1-201ENST00000294256 KRTAP4-5Q9BYR2 181 aa8.89□□□□□ -0.99
SYVN1-201ENST00000294256 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
SYVN1-201ENST00000294256 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
SYVN1-201ENST00000294256 P0C880 135 aa8.84□□□□□ -0.99
SYVN1-201ENST00000294256 K7ERS5 55 aa8.81□□□□□ -1
SYVN1-201ENST00000294256 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
SYVN1-201ENST00000294256 LINC01554Q52M75 96 aa8.78□□□□□ -1
SYVN1-201ENST00000294256 TPRXLQ17RH7 258 aa8.7□□□□□ -1.02
SYVN1-201ENST00000294256 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
SYVN1-201ENST00000294256 KRTAP25-1Q3LHN0 102 aa8.62□□□□□ -1.03
SYVN1-201ENST00000294256 J3QL48 77 aa8.61□□□□□ -1.03
SYVN1-201ENST00000294256 ROMO1P60602 79 aa8.56□□□□□ -1.04
SYVN1-201ENST00000294256 KRTAP12-2P59991 146 aa8.56□□□□□ -1.04
SYVN1-201ENST00000294256 HERC2O95714 4834 aa8.55□□□□□ -1.04
SYVN1-201ENST00000294256 MUC2Q02817 5179 aa8.53□□□□□ -1.04
SYVN1-201ENST00000294256 C10orf95Q9H7T3 257 aa8.5□□□□□ -1.05
SYVN1-201ENST00000294256 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.05
SYVN1-201ENST00000294256 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
SYVN1-201ENST00000294256 M0QZ58 72 aa8.43□□□□□ -1.06
SYVN1-201ENST00000294256 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
SYVN1-201ENST00000294256 MUC17Q685J3 4493 aa8.4□□□□□ -1.06
SYVN1-201ENST00000294256 R4GN34 69 aa8.38□□□□□ -1.07
SYVN1-201ENST00000294256 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
SYVN1-201ENST00000294256 HERC1Q15751 4861 aa8.29□□□□□ -1.08
SYVN1-201ENST00000294256 PCLOQ9Y6V0 5065 aa8.16□□□□□ -1.1
SYVN1-201ENST00000294256 BIRC6Q9NR09 4857 aa8.16□□□□□ -1.1
SYVN1-201ENST00000294256 KRTAP19-2Q3LHN2 52 aa8.08□□□□□ -1.12
SYVN1-201ENST00000294256 FAT4Q6V0I7 4981 aa8.08□□□□□ -1.12
SYVN1-201ENST00000294256 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
SYVN1-201ENST00000294256 CAMK2N1Q7Z7J9 78 aa8□□□□□ -1.13
SYVN1-201ENST00000294256 H3BS24 57 aa7.97□□□□□ -1.13
SYVN1-201ENST00000294256 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
SYVN1-201ENST00000294256 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
SYVN1-201ENST00000294256 UBR4Q5T4S7 5183 aa7.86□□□□□ -1.15
SYVN1-201ENST00000294256 M0R2T5 61 aa7.84□□□□□ -1.15
SYVN1-201ENST00000294256 KRTAP15-1Q3LI76 137 aa7.78□□□□□ -1.16
SYVN1-201ENST00000294256 NDUFAF8A1L188 74 aa7.77□□□□□ -1.17
SYVN1-201ENST00000294256 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
SYVN1-201ENST00000294256 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
SYVN1-201ENST00000294256 MT1HP80294 61 aa7.56□□□□□ -1.2
SYVN1-201ENST00000294256 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
SYVN1-201ENST00000294256 TNP1P09430 55 aa7.54□□□□□ -1.2
SYVN1-201ENST00000294256 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
SYVN1-201ENST00000294256 MT1FP04733 61 aa7.46□□□□□ -1.22
SYVN1-201ENST00000294256 PP632Q6XCG6 107 aa7.46□□□□□ -1.22
SYVN1-201ENST00000294256 MT2AP02795 61 aa7.42□□□□□ -1.22
SYVN1-201ENST00000294256 SPRR2GQ9BYE4 73 aa7.42□□□□□ -1.22
SYVN1-201ENST00000294256 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
SYVN1-201ENST00000294256 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
SYVN1-201ENST00000294256 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
SYVN1-201ENST00000294256 USH2AO75445 5202 aa7.12□□□□□ -1.27
SYVN1-201ENST00000294256 MT1BP07438 61 aa7.12□□□□□ -1.27
SYVN1-201ENST00000294256 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
SYVN1-201ENST00000294256 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
SYVN1-201ENST00000294256 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
SYVN1-201ENST00000294256 MT1XP80297 61 aa7.05□□□□□ -1.28
SYVN1-201ENST00000294256 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
SYVN1-201ENST00000294256 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
SYVN1-201ENST00000294256 KMT2DO14686 5537 aa6.95□□□□□ -1.3
SYVN1-201ENST00000294256 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
SYVN1-201ENST00000294256 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
SYVN1-201ENST00000294256 LCE2BO14633 110 aa6.84□□□□□ -1.31
SYVN1-201ENST00000294256 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
SYVN1-201ENST00000294256 KRTAP12-3P60328 96 aa6.84□□□□□ -1.32
SYVN1-201ENST00000294256 PRO2289Q9P1D8 64 aa6.78□□□□□ -1.32
SYVN1-201ENST00000294256 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
SYVN1-201ENST00000294256 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
SYVN1-201ENST00000294256 KRTAP4-8A0A0G2JLE6 195 aa6.66□□□□□ -1.34
SYVN1-201ENST00000294256 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
SYVN1-201ENST00000294256 LCE2AQ5TA79 106 aaPredicted RBP6.64□□□□□ -1.35
SYVN1-201ENST00000294256 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
SYVN1-201ENST00000294256 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
SYVN1-201ENST00000294256 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
SYVN1-201ENST00000294256 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
SYVN1-201ENST00000294256 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
SYVN1-201ENST00000294256 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
SYVN1-201ENST00000294256 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
SYVN1-201ENST00000294256 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
SYVN1-201ENST00000294256 MT1EP04732 61 aa6.09□□□□□ -1.43
SYVN1-201ENST00000294256 MT1LQ93083 61 aa6.08□□□□□ -1.44
SYVN1-201ENST00000294256 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
SYVN1-201ENST00000294256 KRTAP19-6Q3LI70 58 aa6□□□□□ -1.45
SYVN1-201ENST00000294256 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
SYVN1-201ENST00000294256 INE1O15225 51 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms