RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 H0YAA0 97 aa10.41□□□□□ -0.74
SCUBE1-201ENST00000290460 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
SCUBE1-201ENST00000290460 A0A1B0GU33 70 aa10.35□□□□□ -0.75
SCUBE1-201ENST00000290460 RPL37P61927 97 aaKnown RBP10.35□□□□□ -0.75
SCUBE1-201ENST00000290460 XP32Q5T750 250 aa10.35□□□□□ -0.75
SCUBE1-201ENST00000290460 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
SCUBE1-201ENST00000290460 EPPK1P58107 5090 aaKnown RBP10.26□□□□□ -0.77
SCUBE1-201ENST00000290460 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
SCUBE1-201ENST00000290460 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
SCUBE1-201ENST00000290460 LPAP08519 4548 aa10.18□□□□□ -0.78
SCUBE1-201ENST00000290460 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
SCUBE1-201ENST00000290460 S4R3F8 94 aa10.12□□□□□ -0.79
SCUBE1-201ENST00000290460 LRP2P98164 4655 aa10.12□□□□□ -0.79
SCUBE1-201ENST00000290460 KRTAP10-6P60371 365 aaPredicted RBP10.1□□□□□ -0.79
SCUBE1-201ENST00000290460 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
SCUBE1-201ENST00000290460 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
SCUBE1-201ENST00000290460 ABCA13Q86UQ4 5058 aa10.01□□□□□ -0.81
SCUBE1-201ENST00000290460 LINC01554Q52M75 96 aa9.98□□□□□ -0.81
SCUBE1-201ENST00000290460 P0C880 135 aa9.95□□□□□ -0.82
SCUBE1-201ENST00000290460 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
SCUBE1-201ENST00000290460 A0A0D9SG42 100 aa9.94□□□□□ -0.82
SCUBE1-201ENST00000290460 K7ERS5 55 aa9.94□□□□□ -0.82
SCUBE1-201ENST00000290460 KRTAP4-5Q9BYR2 181 aa9.94□□□□□ -0.82
SCUBE1-201ENST00000290460 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
SCUBE1-201ENST00000290460 KRTAP25-1Q3LHN0 102 aa9.82□□□□□ -0.84
SCUBE1-201ENST00000290460 ROMO1P60602 79 aa9.73□□□□□ -0.85
SCUBE1-201ENST00000290460 KRTAP12-2P59991 146 aa9.68□□□□□ -0.86
SCUBE1-201ENST00000290460 MUC17Q685J3 4493 aa9.63□□□□□ -0.87
SCUBE1-201ENST00000290460 HERC2O95714 4834 aa9.62□□□□□ -0.87
SCUBE1-201ENST00000290460 BIRC6Q9NR09 4857 aa9.62□□□□□ -0.87
SCUBE1-201ENST00000290460 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
SCUBE1-201ENST00000290460 KRTAP12-1P59990 96 aa9.59□□□□□ -0.87
SCUBE1-201ENST00000290460 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
SCUBE1-201ENST00000290460 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
SCUBE1-201ENST00000290460 M0QZ58 72 aa9.54□□□□□ -0.88
SCUBE1-201ENST00000290460 J3QL48 77 aa9.53□□□□□ -0.88
SCUBE1-201ENST00000290460 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
SCUBE1-201ENST00000290460 R4GN34 69 aa9.39□□□□□ -0.91
SCUBE1-201ENST00000290460 MUC2Q02817 5179 aa9.39□□□□□ -0.91
SCUBE1-201ENST00000290460 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
SCUBE1-201ENST00000290460 KRTAP19-2Q3LHN2 52 aa9.33□□□□□ -0.92
SCUBE1-201ENST00000290460 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
SCUBE1-201ENST00000290460 HERC1Q15751 4861 aa9.21□□□□□ -0.94
SCUBE1-201ENST00000290460 FLGP20930 4061 aaPredicted RBP9.16□□□□□ -0.94
SCUBE1-201ENST00000290460 HMCN2Q8NDA2 5059 aa9.07□□□□□ -0.96
SCUBE1-201ENST00000290460 H3BS24 57 aa8.95□□□□□ -0.98
SCUBE1-201ENST00000290460 KRTAP15-1Q3LI76 137 aa8.93□□□□□ -0.98
SCUBE1-201ENST00000290460 FAT4Q6V0I7 4981 aa8.92□□□□□ -0.98
SCUBE1-201ENST00000290460 CAMK2N1Q7Z7J9 78 aa8.91□□□□□ -0.98
SCUBE1-201ENST00000290460 LCE2CQ5TA81 110 aa8.81□□□□□ -1
SCUBE1-201ENST00000290460 RNF213Q63HN8 5207 aa8.72□□□□□ -1.01
SCUBE1-201ENST00000290460 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
SCUBE1-201ENST00000290460 NDUFAF8A1L188 74 aa8.7□□□□□ -1.02
SCUBE1-201ENST00000290460 M0R2T5 61 aa8.61□□□□□ -1.03
SCUBE1-201ENST00000290460 PLAC4Q8WY50 150 aa8.61□□□□□ -1.03
SCUBE1-201ENST00000290460 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
SCUBE1-201ENST00000290460 MT1HP80294 61 aa8.57□□□□□ -1.04
SCUBE1-201ENST00000290460 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
SCUBE1-201ENST00000290460 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
SCUBE1-201ENST00000290460 TNP1P09430 55 aa8.52□□□□□ -1.04
SCUBE1-201ENST00000290460 MT1FP04733 61 aa8.44□□□□□ -1.06
SCUBE1-201ENST00000290460 MT2AP02795 61 aa8.42□□□□□ -1.06
SCUBE1-201ENST00000290460 KRTAP10-10P60014 251 aa8.41□□□□□ -1.06
SCUBE1-201ENST00000290460 KRTAP9-8Q9BYQ0 159 aa8.37□□□□□ -1.07
SCUBE1-201ENST00000290460 KRTAP23-1A1A580 65 aa8.31□□□□□ -1.08
SCUBE1-201ENST00000290460 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
SCUBE1-201ENST00000290460 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
SCUBE1-201ENST00000290460 LUZP6Q538Z0 58 aa8.15□□□□□ -1.1
SCUBE1-201ENST00000290460 MT1BP07438 61 aa8.12□□□□□ -1.11
SCUBE1-201ENST00000290460 KRTAP10-5P60370 271 aa8.05□□□□□ -1.12
SCUBE1-201ENST00000290460 MT1XP80297 61 aa8.05□□□□□ -1.12
SCUBE1-201ENST00000290460 SPRR5A0A1B0GTR4 108 aa8.01□□□□□ -1.13
SCUBE1-201ENST00000290460 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
SCUBE1-201ENST00000290460 KRTAP8-1Q8IUC2 63 aa7.89□□□□□ -1.15
SCUBE1-201ENST00000290460 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
SCUBE1-201ENST00000290460 KRTAP10-7P60409 375 aaPredicted RBP7.84□□□□□ -1.15
SCUBE1-201ENST00000290460 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
SCUBE1-201ENST00000290460 USH2AO75445 5202 aa7.76□□□□□ -1.17
SCUBE1-201ENST00000290460 LCE2BO14633 110 aa7.74□□□□□ -1.17
SCUBE1-201ENST00000290460 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
SCUBE1-201ENST00000290460 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
SCUBE1-201ENST00000290460 A0A0A0MQY5 61 aa7.62□□□□□ -1.19
SCUBE1-201ENST00000290460 KMT2DO14686 5537 aa7.59□□□□□ -1.19
SCUBE1-201ENST00000290460 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
SCUBE1-201ENST00000290460 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
SCUBE1-201ENST00000290460 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
SCUBE1-201ENST00000290460 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.24
SCUBE1-201ENST00000290460 SSPOA2VEC9 5147 aa7.17□□□□□ -1.26
SCUBE1-201ENST00000290460 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
SCUBE1-201ENST00000290460 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.27
SCUBE1-201ENST00000290460 KRTAP9-6A8MVA2 160 aa7.07□□□□□ -1.28
SCUBE1-201ENST00000290460 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
SCUBE1-201ENST00000290460 MT1EP04732 61 aa6.96□□□□□ -1.3
SCUBE1-201ENST00000290460 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
SCUBE1-201ENST00000290460 MT1LQ93083 61 aa6.94□□□□□ -1.3
SCUBE1-201ENST00000290460 INE1O15225 51 aa6.9□□□□□ -1.3
SCUBE1-201ENST00000290460 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
SCUBE1-201ENST00000290460 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
SCUBE1-201ENST00000290460 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
SCUBE1-201ENST00000290460 KRTAP2-3P0C7H8 128 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms