RNA–Protein interactions for RNA: ENST00000290317.9

SLC13A3-202, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5 BASIC

Gene SLC13A3, Length 3,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-202ENST00000290317 FRAS1Q86XX4 4008 aa4.19□□□□□ -1.74
SLC13A3-202ENST00000290317 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
SLC13A3-202ENST00000290317 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
SLC13A3-202ENST00000290317 PKD1P98161 4303 aa4.19□□□□□ -1.74
SLC13A3-202ENST00000290317 SEC61BP60468 96 aaKnown RBP4.18□□□□□ -1.74
SLC13A3-202ENST00000290317 FAT1Q14517 4588 aa4.17□□□□□ -1.74
SLC13A3-202ENST00000290317 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
SLC13A3-202ENST00000290317 PKHD1P08F94 4074 aa4.15□□□□□ -1.74
SLC13A3-202ENST00000290317 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.74
SLC13A3-202ENST00000290317 KRTAP4-5Q9BYR2 181 aa4.15□□□□□ -1.74
SLC13A3-202ENST00000290317 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
SLC13A3-202ENST00000290317 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
SLC13A3-202ENST00000290317 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SLC13A3-202ENST00000290317 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
SLC13A3-202ENST00000290317 RYR3Q15413 4870 aa4.11□□□□□ -1.75
SLC13A3-202ENST00000290317 XP32Q5T750 250 aa4.11□□□□□ -1.75
SLC13A3-202ENST00000290317 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
SLC13A3-202ENST00000290317 KIAA1109Q2LD37 5005 aa4.1□□□□□ -1.75
SLC13A3-202ENST00000290317 RYR1P21817 5038 aa4.09□□□□□ -1.76
SLC13A3-202ENST00000290317 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
SLC13A3-202ENST00000290317 HSPG2P98160 4391 aa4.04□□□□□ -1.76
SLC13A3-202ENST00000290317 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
SLC13A3-202ENST00000290317 LRP1Q07954 4544 aaKnown RBP3.96□□□□□ -1.78
SLC13A3-202ENST00000290317 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
SLC13A3-202ENST00000290317 S4R3F8 94 aa3.95□□□□□ -1.78
SLC13A3-202ENST00000290317 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
SLC13A3-202ENST00000290317 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
SLC13A3-202ENST00000290317 HERC2O95714 4834 aa3.89□□□□□ -1.79
SLC13A3-202ENST00000290317 FAT3Q8TDW7 4589 aa3.88□□□□□ -1.79
SLC13A3-202ENST00000290317 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
SLC13A3-202ENST00000290317 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
SLC13A3-202ENST00000290317 TNXBP22105 4242 aa3.84□□□□□ -1.79
SLC13A3-202ENST00000290317 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
SLC13A3-202ENST00000290317 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
SLC13A3-202ENST00000290317 ABCA13Q86UQ4 5058 aa3.79□□□□□ -1.8
SLC13A3-202ENST00000290317 R4GN34 69 aa3.79□□□□□ -1.8
SLC13A3-202ENST00000290317 KRTAP3-3Q9BYR6 98 aa3.78□□□□□ -1.81
SLC13A3-202ENST00000290317 KRTAP3-2Q9BYR7 98 aa3.78□□□□□ -1.81
SLC13A3-202ENST00000290317 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
SLC13A3-202ENST00000290317 M0QZ58 72 aa3.75□□□□□ -1.81
SLC13A3-202ENST00000290317 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
SLC13A3-202ENST00000290317 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.82
SLC13A3-202ENST00000290317 LCE2DQ5TA82 110 aaPredicted RBP3.7□□□□□ -1.82
SLC13A3-202ENST00000290317 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
SLC13A3-202ENST00000290317 LRP2P98164 4655 aa3.68□□□□□ -1.82
SLC13A3-202ENST00000290317 KRTAP10-10P60014 251 aa3.67□□□□□ -1.82
SLC13A3-202ENST00000290317 PCLOQ9Y6V0 5065 aa3.67□□□□□ -1.82
SLC13A3-202ENST00000290317 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
SLC13A3-202ENST00000290317 LPAP08519 4548 aa3.65□□□□□ -1.83
SLC13A3-202ENST00000290317 HERC1Q15751 4861 aa3.62□□□□□ -1.83
SLC13A3-202ENST00000290317 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
SLC13A3-202ENST00000290317 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
SLC13A3-202ENST00000290317 MT1HP80294 61 aa3.52□□□□□ -1.85
SLC13A3-202ENST00000290317 INE1O15225 51 aa3.5□□□□□ -1.85
SLC13A3-202ENST00000290317 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
SLC13A3-202ENST00000290317 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
SLC13A3-202ENST00000290317 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
SLC13A3-202ENST00000290317 LORP23490 312 aaPredicted RBP3.42□□□□□ -1.86
SLC13A3-202ENST00000290317 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
SLC13A3-202ENST00000290317 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.87
SLC13A3-202ENST00000290317 MT2AP02795 61 aa3.39□□□□□ -1.87
SLC13A3-202ENST00000290317 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
SLC13A3-202ENST00000290317 MUC2Q02817 5179 aa3.39□□□□□ -1.87
SLC13A3-202ENST00000290317 TNP1P09430 55 aa3.38□□□□□ -1.87
SLC13A3-202ENST00000290317 MT1FP04733 61 aa3.36□□□□□ -1.87
SLC13A3-202ENST00000290317 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.87
SLC13A3-202ENST00000290317 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.88
SLC13A3-202ENST00000290317 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
SLC13A3-202ENST00000290317 FSIP2Q5CZC0 6907 aa3.31□□□□□ -1.88
SLC13A3-202ENST00000290317 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
SLC13A3-202ENST00000290317 LCE2AQ5TA79 106 aaPredicted RBP3.27□□□□□ -1.89
SLC13A3-202ENST00000290317 KRTAP19-1Q8IUB9 90 aa3.27□□□□□ -1.89
SLC13A3-202ENST00000290317 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
SLC13A3-202ENST00000290317 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
SLC13A3-202ENST00000290317 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
SLC13A3-202ENST00000290317 LCE2BO14633 110 aa3.16□□□□□ -1.9
SLC13A3-202ENST00000290317 MT1BP07438 61 aa3.15□□□□□ -1.91
SLC13A3-202ENST00000290317 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
SLC13A3-202ENST00000290317 MT1XP80297 61 aa3.06□□□□□ -1.92
SLC13A3-202ENST00000290317 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
SLC13A3-202ENST00000290317 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
SLC13A3-202ENST00000290317 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
SLC13A3-202ENST00000290317 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
SLC13A3-202ENST00000290317 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
SLC13A3-202ENST00000290317 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
SLC13A3-202ENST00000290317 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
SLC13A3-202ENST00000290317 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
SLC13A3-202ENST00000290317 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
SLC13A3-202ENST00000290317 USH2AO75445 5202 aa2.9□□□□□ -1.95
SLC13A3-202ENST00000290317 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
SLC13A3-202ENST00000290317 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
SLC13A3-202ENST00000290317 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
SLC13A3-202ENST00000290317 KRTAP4-8A0A0G2JLE6 195 aa2.85□□□□□ -1.95
SLC13A3-202ENST00000290317 KRTAP4-8Q9BYQ9 185 aa2.85□□□□□ -1.95
SLC13A3-202ENST00000290317 KRTAP9-6A0A140TA67 174 aa2.79□□□□□ -1.96
SLC13A3-202ENST00000290317 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
SLC13A3-202ENST00000290317 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
SLC13A3-202ENST00000290317 SPRR2EP22531 72 aa2.72□□□□□ -1.97
SLC13A3-202ENST00000290317 SPRR2BP35325 72 aa2.72□□□□□ -1.97
SLC13A3-202ENST00000290317 SPRR2AP35326 72 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms