RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 RYR1P21817 5038 aa11.28□□□□□ -0.6
PAXBP1-201ENST00000290178 A0A1B0GU33 70 aa11.26□□□□□ -0.61
PAXBP1-201ENST00000290178 XP32Q5T750 250 aa11.24□□□□□ -0.61
PAXBP1-201ENST00000290178 RPL37P61927 97 aaKnown RBP11.24□□□□□ -0.61
PAXBP1-201ENST00000290178 H1FX-AS1Q4G0G2 97 aa11.22□□□□□ -0.61
PAXBP1-201ENST00000290178 KIAA1109Q2LD37 5005 aa11.21□□□□□ -0.61
PAXBP1-201ENST00000290178 MT1HL1P0DM35 61 aa11.13□□□□□ -0.63
PAXBP1-201ENST00000290178 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
PAXBP1-201ENST00000290178 LPAP08519 4548 aa11.04□□□□□ -0.64
PAXBP1-201ENST00000290178 CSAG1Q6PB30 78 aa11.03□□□□□ -0.64
PAXBP1-201ENST00000290178 KRTAP10-6P60371 365 aaPredicted RBP11□□□□□ -0.65
PAXBP1-201ENST00000290178 S4R3F8 94 aa10.99□□□□□ -0.65
PAXBP1-201ENST00000290178 EPPK1P58107 5090 aaKnown RBP10.99□□□□□ -0.65
PAXBP1-201ENST00000290178 LRP2P98164 4655 aa10.94□□□□□ -0.66
PAXBP1-201ENST00000290178 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
PAXBP1-201ENST00000290178 KRTAP13-4Q3LI77 160 aa10.92□□□□□ -0.66
PAXBP1-201ENST00000290178 LINC01554Q52M75 96 aa10.86□□□□□ -0.67
PAXBP1-201ENST00000290178 A0A0D9SG42 100 aa10.84□□□□□ -0.67
PAXBP1-201ENST00000290178 P0C880 135 aa10.84□□□□□ -0.67
PAXBP1-201ENST00000290178 ABCA13Q86UQ4 5058 aa10.83□□□□□ -0.68
PAXBP1-201ENST00000290178 KRTAP4-5Q9BYR2 181 aa10.8□□□□□ -0.68
PAXBP1-201ENST00000290178 K7ERS5 55 aa10.79□□□□□ -0.68
PAXBP1-201ENST00000290178 TPRXLQ17RH7 258 aa10.78□□□□□ -0.68
PAXBP1-201ENST00000290178 CRIPTQ9P021 101 aa10.75□□□□□ -0.69
PAXBP1-201ENST00000290178 KRTAP25-1Q3LHN0 102 aa10.69□□□□□ -0.7
PAXBP1-201ENST00000290178 ROMO1P60602 79 aa10.59□□□□□ -0.71
PAXBP1-201ENST00000290178 KRTAP12-2P59991 146 aa10.54□□□□□ -0.72
PAXBP1-201ENST00000290178 SPINT4Q6UDR6 99 aa10.46□□□□□ -0.74
PAXBP1-201ENST00000290178 KRTAP12-1P59990 96 aa10.43□□□□□ -0.74
PAXBP1-201ENST00000290178 MUC17Q685J3 4493 aa10.42□□□□□ -0.74
PAXBP1-201ENST00000290178 KRTAP4-1Q9BYQ7 146 aa10.4□□□□□ -0.74
PAXBP1-201ENST00000290178 SEC61BP60468 96 aaKnown RBP10.37□□□□□ -0.75
PAXBP1-201ENST00000290178 J3QL48 77 aa10.35□□□□□ -0.75
PAXBP1-201ENST00000290178 M0QZ58 72 aa10.35□□□□□ -0.75
PAXBP1-201ENST00000290178 C10orf95Q9H7T3 257 aa10.35□□□□□ -0.75
PAXBP1-201ENST00000290178 HERC2O95714 4834 aa10.33□□□□□ -0.76
PAXBP1-201ENST00000290178 H3BS24 57 aa10.26□□□□□ -0.77
PAXBP1-201ENST00000290178 LORP23490 312 aaPredicted RBP10.22□□□□□ -0.77
PAXBP1-201ENST00000290178 R4GN34 69 aa10.21□□□□□ -0.78
PAXBP1-201ENST00000290178 MUC2Q02817 5179 aa10.17□□□□□ -0.78
PAXBP1-201ENST00000290178 KRTAP19-2Q3LHN2 52 aa10.15□□□□□ -0.79
PAXBP1-201ENST00000290178 BIRC6Q9NR09 4857 aa10.13□□□□□ -0.79
PAXBP1-201ENST00000290178 HERC1Q15751 4861 aa9.9□□□□□ -0.82
PAXBP1-201ENST00000290178 PCLOQ9Y6V0 5065 aa9.89□□□□□ -0.83
PAXBP1-201ENST00000290178 FLGP20930 4061 aaPredicted RBP9.83□□□□□ -0.84
PAXBP1-201ENST00000290178 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
PAXBP1-201ENST00000290178 KRTAP15-1Q3LI76 137 aa9.73□□□□□ -0.85
PAXBP1-201ENST00000290178 CAMK2N1Q7Z7J9 78 aa9.68□□□□□ -0.86
PAXBP1-201ENST00000290178 FAT4Q6V0I7 4981 aa9.66□□□□□ -0.86
PAXBP1-201ENST00000290178 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
PAXBP1-201ENST00000290178 NDUFAF8A1L188 74 aa9.49□□□□□ -0.89
PAXBP1-201ENST00000290178 RNF213Q63HN8 5207 aa9.48□□□□□ -0.89
PAXBP1-201ENST00000290178 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
PAXBP1-201ENST00000290178 PLAC4Q8WY50 150 aa9.38□□□□□ -0.91
PAXBP1-201ENST00000290178 M0R2T5 61 aa9.37□□□□□ -0.91
PAXBP1-201ENST00000290178 PP632Q6XCG6 107 aa9.32□□□□□ -0.92
PAXBP1-201ENST00000290178 MT1HP80294 61 aa9.31□□□□□ -0.92
PAXBP1-201ENST00000290178 KRTAP19-1Q8IUB9 90 aa9.3□□□□□ -0.92
PAXBP1-201ENST00000290178 SPRR2GQ9BYE4 73 aa9.27□□□□□ -0.92
PAXBP1-201ENST00000290178 TNP1P09430 55 aa9.26□□□□□ -0.93
PAXBP1-201ENST00000290178 MT1FP04733 61 aa9.18□□□□□ -0.94
PAXBP1-201ENST00000290178 MT2AP02795 61 aa9.15□□□□□ -0.94
PAXBP1-201ENST00000290178 KRTAP10-10P60014 251 aa9.15□□□□□ -0.94
PAXBP1-201ENST00000290178 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
PAXBP1-201ENST00000290178 KRTAP23-1A1A580 65 aa9□□□□□ -0.97
PAXBP1-201ENST00000290178 LCE3AQ5TA76 89 aa8.87□□□□□ -0.99
PAXBP1-201ENST00000290178 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
PAXBP1-201ENST00000290178 LUZP6Q538Z0 58 aa8.85□□□□□ -0.99
PAXBP1-201ENST00000290178 MT1BP07438 61 aa8.83□□□□□ -1
PAXBP1-201ENST00000290178 KRTAP10-5P60370 271 aa8.76□□□□□ -1.01
PAXBP1-201ENST00000290178 MT1XP80297 61 aa8.74□□□□□ -1.01
PAXBP1-201ENST00000290178 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.02
PAXBP1-201ENST00000290178 SPRR5A0A1B0GTR4 108 aa8.7□□□□□ -1.02
PAXBP1-201ENST00000290178 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
PAXBP1-201ENST00000290178 A0A0A0MQY5 61 aa8.56□□□□□ -1.04
PAXBP1-201ENST00000290178 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
PAXBP1-201ENST00000290178 KRTAP10-12P60413 245 aa8.51□□□□□ -1.05
PAXBP1-201ENST00000290178 LCE2BO14633 110 aa8.42□□□□□ -1.06
PAXBP1-201ENST00000290178 KRTAP12-3P60328 96 aa8.41□□□□□ -1.06
PAXBP1-201ENST00000290178 USH2AO75445 5202 aa8.4□□□□□ -1.06
PAXBP1-201ENST00000290178 PRO2289Q9P1D8 64 aa8.33□□□□□ -1.08
PAXBP1-201ENST00000290178 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
PAXBP1-201ENST00000290178 KMT2DO14686 5537 aa8.22□□□□□ -1.09
PAXBP1-201ENST00000290178 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.11
PAXBP1-201ENST00000290178 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.12
PAXBP1-201ENST00000290178 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.12
PAXBP1-201ENST00000290178 LCE3CQ5T5A8 94 aa7.91□□□□□ -1.14
PAXBP1-201ENST00000290178 KRTAP19-7Q3SYF9 63 aa7.79□□□□□ -1.16
PAXBP1-201ENST00000290178 FSIP2Q5CZC0 6907 aa7.77□□□□□ -1.17
PAXBP1-201ENST00000290178 SSPOA2VEC9 5147 aa7.72□□□□□ -1.17
PAXBP1-201ENST00000290178 KRTAP4-7Q9BYR0 210 aa7.71□□□□□ -1.17
PAXBP1-201ENST00000290178 KRTAP9-6A8MVA2 160 aa7.7□□□□□ -1.18
PAXBP1-201ENST00000290178 MT1EP04732 61 aa7.56□□□□□ -1.2
PAXBP1-201ENST00000290178 MT1LQ93083 61 aa7.55□□□□□ -1.2
PAXBP1-201ENST00000290178 INE1O15225 51 aa7.49□□□□□ -1.21
PAXBP1-201ENST00000290178 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
PAXBP1-201ENST00000290178 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
PAXBP1-201ENST00000290178 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
PAXBP1-201ENST00000290178 KRTAP2-3P0C7H8 128 aa7.28□□□□□ -1.24
PAXBP1-201ENST00000290178 KRTAP2-4Q9BYR9 128 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms