RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.47
ERCC3-201ENST00000285398 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
ERCC3-201ENST00000285398 H0YAA0 97 aa5.83□□□□□ -1.48
ERCC3-201ENST00000285398 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
ERCC3-201ENST00000285398 P0C880 135 aa5.81□□□□□ -1.48
ERCC3-201ENST00000285398 HERC2O95714 4834 aa5.81□□□□□ -1.48
ERCC3-201ENST00000285398 Q8N1X5 172 aa5.8□□□□□ -1.48
ERCC3-201ENST00000285398 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
ERCC3-201ENST00000285398 A0A1B0GU33 70 aa5.78□□□□□ -1.48
ERCC3-201ENST00000285398 TNXBP22105 4242 aa5.78□□□□□ -1.48
ERCC3-201ENST00000285398 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
ERCC3-201ENST00000285398 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
ERCC3-201ENST00000285398 K7ERS5 55 aa5.74□□□□□ -1.49
ERCC3-201ENST00000285398 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
ERCC3-201ENST00000285398 CRIPTQ9P021 101 aa5.65□□□□□ -1.51
ERCC3-201ENST00000285398 HERC1Q15751 4861 aa5.64□□□□□ -1.51
ERCC3-201ENST00000285398 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
ERCC3-201ENST00000285398 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
ERCC3-201ENST00000285398 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
ERCC3-201ENST00000285398 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
ERCC3-201ENST00000285398 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
ERCC3-201ENST00000285398 COX6B2Q6YFQ2 88 aa5.6□□□□□ -1.51
ERCC3-201ENST00000285398 C20orf166-AS1Q96NR2 134 aa5.6□□□□□ -1.51
ERCC3-201ENST00000285398 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
ERCC3-201ENST00000285398 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
ERCC3-201ENST00000285398 LPAP08519 4548 aa5.56□□□□□ -1.52
ERCC3-201ENST00000285398 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
ERCC3-201ENST00000285398 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
ERCC3-201ENST00000285398 LRP2P98164 4655 aa5.51□□□□□ -1.53
ERCC3-201ENST00000285398 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
ERCC3-201ENST00000285398 A0A0D9SG42 100 aa5.43□□□□□ -1.54
ERCC3-201ENST00000285398 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
ERCC3-201ENST00000285398 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
ERCC3-201ENST00000285398 HMCN2Q8NDA2 5059 aa5.41□□□□□ -1.54
ERCC3-201ENST00000285398 MUC2Q02817 5179 aa5.41□□□□□ -1.54
ERCC3-201ENST00000285398 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
ERCC3-201ENST00000285398 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
ERCC3-201ENST00000285398 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
ERCC3-201ENST00000285398 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
ERCC3-201ENST00000285398 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
ERCC3-201ENST00000285398 XP32Q5T750 250 aa5.34□□□□□ -1.55
ERCC3-201ENST00000285398 S4R3F8 94 aa5.34□□□□□ -1.55
ERCC3-201ENST00000285398 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
ERCC3-201ENST00000285398 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
ERCC3-201ENST00000285398 KRTAP12-2P59991 146 aa5.28□□□□□ -1.56
ERCC3-201ENST00000285398 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
ERCC3-201ENST00000285398 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
ERCC3-201ENST00000285398 M0QZ58 72 aa5.16□□□□□ -1.58
ERCC3-201ENST00000285398 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.58
ERCC3-201ENST00000285398 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
ERCC3-201ENST00000285398 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
ERCC3-201ENST00000285398 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
ERCC3-201ENST00000285398 R4GN34 69 aa4.95□□□□□ -1.62
ERCC3-201ENST00000285398 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
ERCC3-201ENST00000285398 FLGP20930 4061 aaPredicted RBP4.91□□□□□ -1.62
ERCC3-201ENST00000285398 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
ERCC3-201ENST00000285398 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
ERCC3-201ENST00000285398 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
ERCC3-201ENST00000285398 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
ERCC3-201ENST00000285398 MT1HP80294 61 aa4.76□□□□□ -1.65
ERCC3-201ENST00000285398 M0R2T5 61 aa4.76□□□□□ -1.65
ERCC3-201ENST00000285398 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
ERCC3-201ENST00000285398 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
ERCC3-201ENST00000285398 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
ERCC3-201ENST00000285398 TNP1P09430 55 aa4.61□□□□□ -1.67
ERCC3-201ENST00000285398 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
ERCC3-201ENST00000285398 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
ERCC3-201ENST00000285398 USH2AO75445 5202 aa4.55□□□□□ -1.68
ERCC3-201ENST00000285398 MT2AP02795 61 aa4.55□□□□□ -1.68
ERCC3-201ENST00000285398 MT1FP04733 61 aa4.55□□□□□ -1.68
ERCC3-201ENST00000285398 LCE2BO14633 110 aa4.53□□□□□ -1.68
ERCC3-201ENST00000285398 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
ERCC3-201ENST00000285398 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
ERCC3-201ENST00000285398 INE1O15225 51 aa4.41□□□□□ -1.7
ERCC3-201ENST00000285398 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
ERCC3-201ENST00000285398 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
ERCC3-201ENST00000285398 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
ERCC3-201ENST00000285398 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
ERCC3-201ENST00000285398 MT1BP07438 61 aa4.26□□□□□ -1.73
ERCC3-201ENST00000285398 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
ERCC3-201ENST00000285398 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
ERCC3-201ENST00000285398 KMT2DO14686 5537 aa4.17□□□□□ -1.74
ERCC3-201ENST00000285398 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
ERCC3-201ENST00000285398 MT1XP80297 61 aa4.12□□□□□ -1.75
ERCC3-201ENST00000285398 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
ERCC3-201ENST00000285398 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
ERCC3-201ENST00000285398 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
ERCC3-201ENST00000285398 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
ERCC3-201ENST00000285398 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
ERCC3-201ENST00000285398 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
ERCC3-201ENST00000285398 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
ERCC3-201ENST00000285398 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
ERCC3-201ENST00000285398 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
ERCC3-201ENST00000285398 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
ERCC3-201ENST00000285398 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
ERCC3-201ENST00000285398 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
ERCC3-201ENST00000285398 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
ERCC3-201ENST00000285398 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
ERCC3-201ENST00000285398 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
ERCC3-201ENST00000285398 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms