RNA–Protein interactions for RNA: ENST00000284110.1

HS3ST3A1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST3A1, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-201ENST00000284110 APOBP04114 4563 aaKnown RBP10.52□□□□□ -0.73
HS3ST3A1-201ENST00000284110 COX6B2Q6YFQ2 88 aa10.5□□□□□ -0.73
HS3ST3A1-201ENST00000284110 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
HS3ST3A1-201ENST00000284110 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
HS3ST3A1-201ENST00000284110 RYR3Q15413 4870 aa10.33□□□□□ -0.76
HS3ST3A1-201ENST00000284110 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
HS3ST3A1-201ENST00000284110 LRP1Q07954 4544 aaKnown RBP10.27□□□□□ -0.77
HS3ST3A1-201ENST00000284110 KRTAP3-1Q9BYR8 98 aa10.26□□□□□ -0.77
HS3ST3A1-201ENST00000284110 PKHD1L1Q86WI1 4243 aa10.26□□□□□ -0.77
HS3ST3A1-201ENST00000284110 KRTAP13-4Q3LI77 160 aa10.18□□□□□ -0.78
HS3ST3A1-201ENST00000284110 A0A0D9SG42 100 aa10.17□□□□□ -0.78
HS3ST3A1-201ENST00000284110 HSPG2P98160 4391 aa10.17□□□□□ -0.78
HS3ST3A1-201ENST00000284110 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
HS3ST3A1-201ENST00000284110 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
HS3ST3A1-201ENST00000284110 KIAA1109Q2LD37 5005 aa10.08□□□□□ -0.8
HS3ST3A1-201ENST00000284110 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
HS3ST3A1-201ENST00000284110 KRTAP10-6P60371 365 aaPredicted RBP10.07□□□□□ -0.8
HS3ST3A1-201ENST00000284110 TNXBP22105 4242 aa10.06□□□□□ -0.8
HS3ST3A1-201ENST00000284110 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
HS3ST3A1-201ENST00000284110 XP32Q5T750 250 aa10.05□□□□□ -0.8
HS3ST3A1-201ENST00000284110 S4R3F8 94 aa10.05□□□□□ -0.8
HS3ST3A1-201ENST00000284110 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
HS3ST3A1-201ENST00000284110 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
HS3ST3A1-201ENST00000284110 RYR1P21817 5038 aa10.03□□□□□ -0.8
HS3ST3A1-201ENST00000284110 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
HS3ST3A1-201ENST00000284110 Q5VSD8 79 aa9.99□□□□□ -0.81
HS3ST3A1-201ENST00000284110 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
HS3ST3A1-201ENST00000284110 KRTAP12-2P59991 146 aa9.95□□□□□ -0.82
HS3ST3A1-201ENST00000284110 PLAC4Q8WY50 150 aa9.93□□□□□ -0.82
HS3ST3A1-201ENST00000284110 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
HS3ST3A1-201ENST00000284110 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
HS3ST3A1-201ENST00000284110 CAMK2N1Q7Z7J9 78 aa9.76□□□□□ -0.85
HS3ST3A1-201ENST00000284110 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
HS3ST3A1-201ENST00000284110 ABCA13Q86UQ4 5058 aa9.67□□□□□ -0.86
HS3ST3A1-201ENST00000284110 MT1HL1P0DM35 61 aa9.67□□□□□ -0.86
HS3ST3A1-201ENST00000284110 LPAP08519 4548 aa9.66□□□□□ -0.86
HS3ST3A1-201ENST00000284110 LRP2P98164 4655 aa9.62□□□□□ -0.87
HS3ST3A1-201ENST00000284110 J3QL48 77 aa9.58□□□□□ -0.88
HS3ST3A1-201ENST00000284110 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
HS3ST3A1-201ENST00000284110 PRO2289Q9P1D8 64 aa9.48□□□□□ -0.89
HS3ST3A1-201ENST00000284110 HERC2O95714 4834 aa9.35□□□□□ -0.91
HS3ST3A1-201ENST00000284110 M0QZ58 72 aa9.28□□□□□ -0.92
HS3ST3A1-201ENST00000284110 MUC2Q02817 5179 aa9.13□□□□□ -0.95
HS3ST3A1-201ENST00000284110 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
HS3ST3A1-201ENST00000284110 SPRR5A0A1B0GTR4 108 aa9.1□□□□□ -0.95
HS3ST3A1-201ENST00000284110 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
HS3ST3A1-201ENST00000284110 R4GN34 69 aa9.08□□□□□ -0.96
HS3ST3A1-201ENST00000284110 MUC17Q685J3 4493 aa9.06□□□□□ -0.96
HS3ST3A1-201ENST00000284110 HERC1Q15751 4861 aa9.05□□□□□ -0.96
HS3ST3A1-201ENST00000284110 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
HS3ST3A1-201ENST00000284110 KRTAP4-1Q9BYQ7 146 aa9□□□□□ -0.97
HS3ST3A1-201ENST00000284110 INE1O15225 51 aa9□□□□□ -0.97
HS3ST3A1-201ENST00000284110 HMCN2Q8NDA2 5059 aa8.77□□□□□ -1.01
HS3ST3A1-201ENST00000284110 KRTAP19-2Q3LHN2 52 aa8.72□□□□□ -1.01
HS3ST3A1-201ENST00000284110 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
HS3ST3A1-201ENST00000284110 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
HS3ST3A1-201ENST00000284110 RNF213Q63HN8 5207 aa8.63□□□□□ -1.03
HS3ST3A1-201ENST00000284110 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
HS3ST3A1-201ENST00000284110 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
HS3ST3A1-201ENST00000284110 KRTAP23-1A1A580 65 aa8.5□□□□□ -1.05
HS3ST3A1-201ENST00000284110 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
HS3ST3A1-201ENST00000284110 TNP1P09430 55 aa8.32□□□□□ -1.08
HS3ST3A1-201ENST00000284110 M0R2T5 61 aa8.17□□□□□ -1.1
HS3ST3A1-201ENST00000284110 MT1HP80294 61 aa8.11□□□□□ -1.11
HS3ST3A1-201ENST00000284110 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
HS3ST3A1-201ENST00000284110 MT1FP04733 61 aa7.94□□□□□ -1.14
HS3ST3A1-201ENST00000284110 MT2AP02795 61 aa7.92□□□□□ -1.14
HS3ST3A1-201ENST00000284110 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
HS3ST3A1-201ENST00000284110 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
HS3ST3A1-201ENST00000284110 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
HS3ST3A1-201ENST00000284110 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
HS3ST3A1-201ENST00000284110 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
HS3ST3A1-201ENST00000284110 USH2AO75445 5202 aa7.6□□□□□ -1.19
HS3ST3A1-201ENST00000284110 MT1BP07438 61 aa7.58□□□□□ -1.2
HS3ST3A1-201ENST00000284110 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
HS3ST3A1-201ENST00000284110 KRTAP19-8Q3LI54 63 aa7.56□□□□□ -1.2
HS3ST3A1-201ENST00000284110 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
HS3ST3A1-201ENST00000284110 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
HS3ST3A1-201ENST00000284110 MT1XP80297 61 aa7.46□□□□□ -1.22
HS3ST3A1-201ENST00000284110 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
HS3ST3A1-201ENST00000284110 LCE2BO14633 110 aa7.36□□□□□ -1.23
HS3ST3A1-201ENST00000284110 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
HS3ST3A1-201ENST00000284110 KMT2DO14686 5537 aa7.29□□□□□ -1.24
HS3ST3A1-201ENST00000284110 KRTAP10-7P60409 375 aaPredicted RBP7.29□□□□□ -1.24
HS3ST3A1-201ENST00000284110 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
HS3ST3A1-201ENST00000284110 KRTAP2-3P0C7H8 128 aa7.12□□□□□ -1.27
HS3ST3A1-201ENST00000284110 KRTAP2-4Q9BYR9 128 aa7.12□□□□□ -1.27
HS3ST3A1-201ENST00000284110 KRTAP2-1Q9BYU5 128 aa7.12□□□□□ -1.27
HS3ST3A1-201ENST00000284110 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
HS3ST3A1-201ENST00000284110 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
HS3ST3A1-201ENST00000284110 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
HS3ST3A1-201ENST00000284110 LCE3CQ5T5A8 94 aa6.97□□□□□ -1.29
HS3ST3A1-201ENST00000284110 KRTAP9-6A8MVA2 160 aa6.92□□□□□ -1.3
HS3ST3A1-201ENST00000284110 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.3
HS3ST3A1-201ENST00000284110 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
HS3ST3A1-201ENST00000284110 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
HS3ST3A1-201ENST00000284110 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
HS3ST3A1-201ENST00000284110 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
HS3ST3A1-201ENST00000284110 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
HS3ST3A1-201ENST00000284110 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms